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The map label for this gene is 66047621

Identifier: 66047621

GI number: 66047621

Start: 5256440

End: 5257324

Strand: Direct

Name: 66047621

Synonym: Psyr_4394

Alternate gene names: NA

Gene position: 5256440-5257324 (Clockwise)

Preceding gene: 66047620

Following gene: 66047622

Centisome position: 86.26

GC content: 61.47

Gene sequence:

>885_bases
ATGAGTGCGTCTCTGGTACTGGGCCTGATCTCCTTGCTGCTGTTTATTGCGTCCATTCGCATGTTCTACCTGGCGCTCAA
TCAGGGAGCCAGTGAACGGGTCCGGCAGCGGCTAATGGCCGGGCAAGTGCAGCCCGTGGCTGAAAAGACCGGCTGGAGCT
ACCTGGATCGGGCCTTTTTGCGCGCCGGGCTGGGACAGCCGACCAAACGCATGGGCCTGGCCTTGTCGCTGTATGCGCTG
CTGATACTGATCGGCTACGCAATGGCCGGCGTCGTCGGTGCGCTCAGCGTGCTGCTGGCGGTGCCTCTGACACTGCGTGT
GTTCGTGTCGTGGCGCTATGAGGTGCGCGTGCGCCGCATGATCCAGCAGCTGCCGCAATTGCTCGACCATACCGTGCGCA
GCCTCAAGTCCGGCAGAACCCTGGCCGACGCAGTGCTGCACGGCATCGACGCCACCGACCAGCCGCTCAAGGACGGCATG
AGCCGGATCGAGCGCAACGTACAACTGGGGGTCAGTCTGCCGGATGCGGCAAGGGACTTTGCAGAACTGTATGAGCGCGA
CGAATTTCACCTGTTCGCCATCGGCTTGCGGGTCAATCACCGCTACGGCGGCAATGCCAGCGAACTGATGGAAAACCTGA
TCAAGCTGATTCGTGATCGGGAACAGGCCGGTCGCCAATTGCGCGCAATGACCGGCGAAACCCGAATGACTGCCGTAGTG
CTGGCCCTGCTGCCGATCAGCATGGCCGGTTACTTTCTGGCGGTTAACCCCAGCTATCTGCTGCATATGTGGGACGACGA
AAGCGGCAAGATCATGCTGAGCGTGGCCTTCGCCCTGCAGGTCACGGGGTGCGTGGTGTTGTGGCGCATGTTGAGGAGCA
TTTGA

Upstream 100 bases:

>100_bases
TCGCGTTGATCGCCGCACCGGGGTCGGTTTCATGCGCGAAGCGGCCCACGCTGCTGGCGACAAGCTGCGGCCTGGCTACT
GACATGCTCAAGGAGTCGGC

Downstream 100 bases:

>100_bases
GATGGAACTGTTATTCGCCGCCATGATGCTTGCCGCTGCCGCATTTCTGCTGTTGTCAGGCATAGCCCGTCAACGTAGTA
ATGAACGCCTGGTGGCCAGA

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; TadB Protein; Type II Secretion System; Type II Secretion System F Domain; Secretion System Protein; Type II Secretion System Protein F Domain; Tight Adherence TadB Related Transmembrane Protein; Flp Type Pilus Assembly Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Tad Secretion System Pilus Assembly Protein; Integral Membrane Protein; Pilus Assembly Transmembrane Protein; Pilus Assembly Protein Tadb; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Components Of Type IV Pilus; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSASLVLGLISLLLFIASIRMFYLALNQGASERVRQRLMAGQVQPVAEKTGWSYLDRAFLRAGLGQPTKRMGLALSLYAL
LILIGYAMAGVVGALSVLLAVPLTLRVFVSWRYEVRVRRMIQQLPQLLDHTVRSLKSGRTLADAVLHGIDATDQPLKDGM
SRIERNVQLGVSLPDAARDFAELYERDEFHLFAIGLRVNHRYGGNASELMENLIKLIRDREQAGRQLRAMTGETRMTAVV
LALLPISMAGYFLAVNPSYLLHMWDDESGKIMLSVAFALQVTGCVVLWRMLRSI

Sequences:

>Translated_294_residues
MSASLVLGLISLLLFIASIRMFYLALNQGASERVRQRLMAGQVQPVAEKTGWSYLDRAFLRAGLGQPTKRMGLALSLYAL
LILIGYAMAGVVGALSVLLAVPLTLRVFVSWRYEVRVRRMIQQLPQLLDHTVRSLKSGRTLADAVLHGIDATDQPLKDGM
SRIERNVQLGVSLPDAARDFAELYERDEFHLFAIGLRVNHRYGGNASELMENLIKLIRDREQAGRQLRAMTGETRMTAVV
LALLPISMAGYFLAVNPSYLLHMWDDESGKIMLSVAFALQVTGCVVLWRMLRSI
>Mature_293_residues
SASLVLGLISLLLFIASIRMFYLALNQGASERVRQRLMAGQVQPVAEKTGWSYLDRAFLRAGLGQPTKRMGLALSLYALL
ILIGYAMAGVVGALSVLLAVPLTLRVFVSWRYEVRVRRMIQQLPQLLDHTVRSLKSGRTLADAVLHGIDATDQPLKDGMS
RIERNVQLGVSLPDAARDFAELYERDEFHLFAIGLRVNHRYGGNASELMENLIKLIRDREQAGRQLRAMTGETRMTAVVL
ALLPISMAGYFLAVNPSYLLHMWDDESGKIMLSVAFALQVTGCVVLWRMLRSI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32787; Mature: 32656

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASLVLGLISLLLFIASIRMFYLALNQGASERVRQRLMAGQVQPVAEKTGWSYLDRAFL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH
RAGLGQPTKRMGLALSLYALLILIGYAMAGVVGALSVLLAVPLTLRVFVSWRYEVRVRRM
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQQLPQLLDHTVRSLKSGRTLADAVLHGIDATDQPLKDGMSRIERNVQLGVSLPDAARDF
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
AELYERDEFHLFAIGLRVNHRYGGNASELMENLIKLIRDREQAGRQLRAMTGETRMTAVV
HHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LALLPISMAGYFLAVNPSYLLHMWDDESGKIMLSVAFALQVTGCVVLWRMLRSI
HHHHHHHHHCEEEEECCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SASLVLGLISLLLFIASIRMFYLALNQGASERVRQRLMAGQVQPVAEKTGWSYLDRAFL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHH
RAGLGQPTKRMGLALSLYALLILIGYAMAGVVGALSVLLAVPLTLRVFVSWRYEVRVRRM
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQQLPQLLDHTVRSLKSGRTLADAVLHGIDATDQPLKDGMSRIERNVQLGVSLPDAARDF
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
AELYERDEFHLFAIGLRVNHRYGGNASELMENLIKLIRDREQAGRQLRAMTGETRMTAVV
HHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LALLPISMAGYFLAVNPSYLLHMWDDESGKIMLSVAFALQVTGCVVLWRMLRSI
HHHHHHHHHCEEEEECCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA