| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is rhlE [H]
Identifier: 66047524
GI number: 66047524
Start: 5123836
End: 5125164
Strand: Reverse
Name: rhlE [H]
Synonym: Psyr_4297
Alternate gene names: 66047524
Gene position: 5125164-5123836 (Counterclockwise)
Preceding gene: 66047525
Following gene: 66047521
Centisome position: 84.11
GC content: 62.15
Gene sequence:
>1329_bases ATGACATTCGCCTCTCTCGGCCTGATCGAACCCTTGCTGCGCGCCCTCGAAGCGCTCGGTTACCAGACTCCGACGCCTGT ACAGACCCAGGCAATTCCTCCGGTACTGGCGGGCCGCGATCTGATGGCAGCTGCGCAGACCGGCACCGGCAAGACCGCAG GTTTTGCCTTGCCGCTGCTGCAACGGCTGACCATGGAAGGCCCGAAAGTCGCGCCCAACTCGATTCGCGCGCTGGTACTG GCGCCGACCCGCGAGCTGGCCGATCAGGTTCACGAAAGCATTCGTCAGTACGCCGAGCATCTGCCGCTGACCACCTACGC GGCTTACGGCGGCGTGAGCATCAACCCGCAAATGATGAAGCTGCGCAGGGGCGTCGACGTGCTGGTCGCGACCCCCGGTC GCTTGCTCGATCTGCATCGCCAGAACGCGGTCAAGTTCTCCCAGTTGCAGACGCTGATCCTCGATGAAGCTGATCGTATG CTCGACCTGGGTTTTGCCGAGGAACTGCGCGGTATCTACGCGGTGTTGCCCAAGCAGCGCCAGACCCTGCTGTTCTCCGC GACGTTCTCTGACGAGATTCGTCTGCTGGCCGCGCAGATGCTCAATGACCCGCTGACCATCGAAGTCAGCCCGCGCAACG TCGCGGCGTCTTCGGTCAAGCAATGGGTCGTGACCGTCGACAAGAAACGCAAGGCGGATCTGTTCATCCATCTGATGAAG AAGCATCGCTGGGGTCAGGTGCTGGTATTCGCCAAGACCCGGGTTGGCGTCGATCAACTGGTGGATCGCTTGCAGGCGCT GGGCATGAACGCCGACGGCATTCATGGCGACAAACCGCAGGCCACTCGCCAGCGTGCGCTGGACCGCTTCAAGAGCAACG AAGTGAAGATTCTGGTCGCCACCGACGTGGCAGCGCGCGGTCTGGACATTGATGACCTGCCGACCGTGGTCAACCTGGAC CTGCCGATCGTGGCCGAGGATTACATCCACCGTATTGGCCGCACCGGCCGTGCGGGGCTGACGGGGGAGGCAATTTCGCT GGTGTGTGCCGATGAGGTCGAGTTGCTGTCAGCCATCGAAGTGCTGACCCGCCAGACCCTGGAGCGCAAGGAAGAGCAGG ACTTCGAGCCGGAGCATCGCGTACCGAGCACGGATGCCAGCGGCCAGATCCTGAAAAAGCCCAAGAAACCGAAAAAATCC AAGGTGTCGGGCAGCAAGCGCAACCTGGGCAAATGGGTCGACAGCGGCGACTCCGAGCCTGCGCCGGTGGTCAAACCGGT GCGTAAAGTACCGGTCTTCAACACCGGGCCACGCAAGAAGAAGCCTTGA
Upstream 100 bases:
>100_bases CGCCGCCGCCAGAGGTCGCATCGACACGCACAAGCTAACCGAGGCGCGCCGGACAGGTTAAACTGCGCGCCTTGCGTTGA ATCTTTCCTACGGTATTTCC
Downstream 100 bases:
>100_bases GGCGCAGTGCGCATTCAAAGCGGACGGAGCGCTCATTGCTATACACAAGTTCGTTTTTGATTCTGGCCGGAGGCCGTAGG AGCGAACTTGTTCGCGAAGG
Product: helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTFASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLLQRLTMEGPKVAPNSIRALVL APTRELADQVHESIRQYAEHLPLTTYAAYGGVSINPQMMKLRRGVDVLVATPGRLLDLHRQNAVKFSQLQTLILDEADRM LDLGFAEELRGIYAVLPKQRQTLLFSATFSDEIRLLAAQMLNDPLTIEVSPRNVAASSVKQWVVTVDKKRKADLFIHLMK KHRWGQVLVFAKTRVGVDQLVDRLQALGMNADGIHGDKPQATRQRALDRFKSNEVKILVATDVAARGLDIDDLPTVVNLD LPIVAEDYIHRIGRTGRAGLTGEAISLVCADEVELLSAIEVLTRQTLERKEEQDFEPEHRVPSTDASGQILKKPKKPKKS KVSGSKRNLGKWVDSGDSEPAPVVKPVRKVPVFNTGPRKKKP
Sequences:
>Translated_442_residues MTFASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLLQRLTMEGPKVAPNSIRALVL APTRELADQVHESIRQYAEHLPLTTYAAYGGVSINPQMMKLRRGVDVLVATPGRLLDLHRQNAVKFSQLQTLILDEADRM LDLGFAEELRGIYAVLPKQRQTLLFSATFSDEIRLLAAQMLNDPLTIEVSPRNVAASSVKQWVVTVDKKRKADLFIHLMK KHRWGQVLVFAKTRVGVDQLVDRLQALGMNADGIHGDKPQATRQRALDRFKSNEVKILVATDVAARGLDIDDLPTVVNLD LPIVAEDYIHRIGRTGRAGLTGEAISLVCADEVELLSAIEVLTRQTLERKEEQDFEPEHRVPSTDASGQILKKPKKPKKS KVSGSKRNLGKWVDSGDSEPAPVVKPVRKVPVFNTGPRKKKP >Mature_441_residues TFASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLLQRLTMEGPKVAPNSIRALVLA PTRELADQVHESIRQYAEHLPLTTYAAYGGVSINPQMMKLRRGVDVLVATPGRLLDLHRQNAVKFSQLQTLILDEADRML DLGFAEELRGIYAVLPKQRQTLLFSATFSDEIRLLAAQMLNDPLTIEVSPRNVAASSVKQWVVTVDKKRKADLFIHLMKK HRWGQVLVFAKTRVGVDQLVDRLQALGMNADGIHGDKPQATRQRALDRFKSNEVKILVATDVAARGLDIDDLPTVVNLDL PIVAEDYIHRIGRTGRAGLTGEAISLVCADEVELLSAIEVLTRQTLERKEEQDFEPEHRVPSTDASGQILKKPKKPKKSK VSGSKRNLGKWVDSGDSEPAPVVKPVRKVPVFNTGPRKKKP
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=42.6997245179063, Blast_Score=286, Evalue=3e-77, Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=40.5479452054795, Blast_Score=258, Evalue=6e-69, Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=40.5479452054795, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=40.5479452054795, Blast_Score=258, Evalue=8e-69, Organism=Homo sapiens, GI169881239, Length=365, Percent_Identity=40.2739726027397, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI13514809, Length=365, Percent_Identity=40.2739726027397, Blast_Score=256, Evalue=2e-68, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=38.655462184874, Blast_Score=256, Evalue=4e-68, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=38.655462184874, Blast_Score=255, Evalue=5e-68, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=38.655462184874, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=38.655462184874, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI7661920, Length=360, Percent_Identity=36.3888888888889, Blast_Score=254, Evalue=8e-68, Organism=Homo sapiens, GI20149629, Length=377, Percent_Identity=37.4005305039788, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI222352149, Length=365, Percent_Identity=38.9041095890411, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=40.0560224089636, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI41327773, Length=368, Percent_Identity=35.5978260869565, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=39.0374331550802, Blast_Score=242, Evalue=4e-64, Organism=Homo sapiens, GI4758138, Length=369, Percent_Identity=36.0433604336043, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=37.6068376068376, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=37.6068376068376, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI148613856, Length=332, Percent_Identity=39.1566265060241, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI38201710, Length=332, Percent_Identity=39.1566265060241, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI188035877, Length=352, Percent_Identity=37.5, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI55749865, Length=359, Percent_Identity=36.7688022284123, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=36.0313315926893, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=34.8189415041783, Blast_Score=229, Evalue=3e-60, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=34.9593495934959, Blast_Score=219, Evalue=6e-57, Organism=Homo sapiens, GI41327776, Length=377, Percent_Identity=35.0132625994695, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI38327634, Length=354, Percent_Identity=37.0056497175141, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=33.0623306233062, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI51094101, Length=367, Percent_Identity=34.3324250681199, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI164419743, Length=367, Percent_Identity=34.3324250681199, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI13129006, Length=356, Percent_Identity=35.1123595505618, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI38569503, Length=365, Percent_Identity=33.1506849315069, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI38569505, Length=365, Percent_Identity=33.1506849315069, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI41327779, Length=354, Percent_Identity=34.7457627118644, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI50659095, Length=370, Percent_Identity=33.7837837837838, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=32.3204419889503, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=32.5714285714286, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=32.5714285714286, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI13514831, Length=374, Percent_Identity=32.3529411764706, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=31.4285714285714, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI164419732, Length=388, Percent_Identity=29.639175257732, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI8922886, Length=402, Percent_Identity=31.0945273631841, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=32.0099255583127, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI17505907, Length=414, Percent_Identity=31.1594202898551, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI6005743, Length=402, Percent_Identity=30.8457711442786, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI62241022, Length=385, Percent_Identity=30.3896103896104, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI4826686, Length=420, Percent_Identity=27.6190476190476, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI62241024, Length=363, Percent_Identity=30.5785123966942, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI256773275, Length=408, Percent_Identity=32.843137254902, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI154759257, Length=406, Percent_Identity=30.0492610837438, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI9966805, Length=309, Percent_Identity=32.0388349514563, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=37.037037037037, Blast_Score=125, Evalue=9e-29, Organism=Escherichia coli, GI1787016, Length=379, Percent_Identity=57.2559366754617, Blast_Score=432, Evalue=1e-122, Organism=Escherichia coli, GI87082221, Length=391, Percent_Identity=39.386189258312, Blast_Score=279, Evalue=3e-76, Organism=Escherichia coli, GI1790214, Length=370, Percent_Identity=40.2702702702703, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=41.5254237288136, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1788930, Length=394, Percent_Identity=39.8477157360406, Blast_Score=244, Evalue=1e-65, Organism=Escherichia coli, GI48994977, Length=348, Percent_Identity=26.7241379310345, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17555296, Length=423, Percent_Identity=38.0614657210402, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI71995724, Length=360, Percent_Identity=38.3333333333333, Blast_Score=258, Evalue=5e-69, Organism=Caenorhabditis elegans, GI17507121, Length=360, Percent_Identity=38.0555555555556, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI71987143, Length=360, Percent_Identity=35.8333333333333, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17510309, Length=362, Percent_Identity=41.1602209944751, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17510307, Length=362, Percent_Identity=41.1602209944751, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=41.1602209944751, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17510559, Length=387, Percent_Identity=37.2093023255814, Blast_Score=247, Evalue=9e-66, Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=37.434554973822, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI86570094, Length=366, Percent_Identity=37.7049180327869, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=39.5604395604396, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI115533224, Length=333, Percent_Identity=39.6396396396396, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17507945, Length=338, Percent_Identity=37.8698224852071, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI115532548, Length=387, Percent_Identity=35.6589147286822, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI115532546, Length=368, Percent_Identity=36.1413043478261, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17552642, Length=365, Percent_Identity=35.3424657534247, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17537549, Length=368, Percent_Identity=35.8695652173913, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=33.8935574229692, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17507877, Length=380, Percent_Identity=34.4736842105263, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=33.7047353760446, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI17507881, Length=381, Percent_Identity=34.9081364829396, Blast_Score=216, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17552114, Length=366, Percent_Identity=32.2404371584699, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17507879, Length=380, Percent_Identity=33.4210526315789, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17509811, Length=352, Percent_Identity=34.9431818181818, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17505370, Length=354, Percent_Identity=36.7231638418079, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17508543, Length=383, Percent_Identity=32.3759791122715, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=32.0916905444126, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=30.5714285714286, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI193208216, Length=409, Percent_Identity=30.3178484107579, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17556951, Length=351, Percent_Identity=32.1937321937322, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI71990816, Length=371, Percent_Identity=33.1536388140162, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17536099, Length=390, Percent_Identity=31.5384615384615, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17536101, Length=390, Percent_Identity=31.5384615384615, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17536103, Length=390, Percent_Identity=31.2820512820513, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17553716, Length=356, Percent_Identity=28.3707865168539, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=27.4463007159904, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17507641, Length=380, Percent_Identity=28.1578947368421, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=27.7628032345013, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI25148291, Length=328, Percent_Identity=28.6585365853659, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71997889, Length=393, Percent_Identity=26.972010178117, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71982862, Length=200, Percent_Identity=31, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25148205, Length=342, Percent_Identity=25.4385964912281, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=40.4040404040404, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6325138, Length=383, Percent_Identity=42.2976501305483, Blast_Score=281, Evalue=2e-76, Organism=Saccharomyces cerevisiae, GI6324778, Length=414, Percent_Identity=38.4057971014493, Blast_Score=263, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6321856, Length=416, Percent_Identity=36.5384615384615, Blast_Score=259, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6321360, Length=343, Percent_Identity=40.5247813411079, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6320224, Length=363, Percent_Identity=34.9862258953168, Blast_Score=253, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=38.9204545454545, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6323021, Length=355, Percent_Identity=39.7183098591549, Blast_Score=246, Evalue=7e-66, Organism=Saccharomyces cerevisiae, GI6320041, Length=359, Percent_Identity=33.983286908078, Blast_Score=226, Evalue=6e-60, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=38.8888888888889, Blast_Score=224, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=35.2941176470588, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=33.8753387533875, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=33.8753387533875, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320449, Length=371, Percent_Identity=35.0404312668464, Blast_Score=201, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6321111, Length=361, Percent_Identity=33.2409972299169, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6319714, Length=392, Percent_Identity=30.1020408163265, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=416, Percent_Identity=30.0480769230769, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=33.2417582417582, Blast_Score=195, Evalue=9e-51, Organism=Saccharomyces cerevisiae, GI6320119, Length=354, Percent_Identity=32.7683615819209, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6321963, Length=373, Percent_Identity=35.656836461126, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6319618, Length=408, Percent_Identity=30.6372549019608, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6320400, Length=406, Percent_Identity=30.7881773399015, Blast_Score=172, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6323306, Length=421, Percent_Identity=28.7410926365796, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6321267, Length=376, Percent_Identity=29.5212765957447, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=485, Percent_Identity=27.8350515463918, Blast_Score=135, Evalue=9e-33, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=25.2873563218391, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321374, Length=409, Percent_Identity=24.6943765281174, Blast_Score=107, Evalue=4e-24, Organism=Drosophila melanogaster, GI24584399, Length=366, Percent_Identity=39.0710382513661, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI21356161, Length=363, Percent_Identity=39.9449035812672, Blast_Score=259, Evalue=2e-69, Organism=Drosophila melanogaster, GI24585582, Length=377, Percent_Identity=38.1962864721485, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI17985987, Length=383, Percent_Identity=39.9477806788512, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=37.6068376068376, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=36.968085106383, Blast_Score=251, Evalue=6e-67, Organism=Drosophila melanogaster, GI24644483, Length=382, Percent_Identity=34.8167539267016, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644479, Length=363, Percent_Identity=35.2617079889807, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI17977678, Length=363, Percent_Identity=38.5674931129477, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=34.9593495934959, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=34.9593495934959, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=34.9593495934959, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24645031, Length=360, Percent_Identity=35, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=34.9593495934959, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=34.9593495934959, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=38.9355742296919, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI21355075, Length=368, Percent_Identity=37.5, Blast_Score=239, Evalue=2e-63, Organism=Drosophila melanogaster, GI28574962, Length=352, Percent_Identity=36.6477272727273, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24584994, Length=384, Percent_Identity=34.8958333333333, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=33.695652173913, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=33.695652173913, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=33.695652173913, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=33.695652173913, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI28575014, Length=356, Percent_Identity=36.2359550561798, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI28571808, Length=367, Percent_Identity=37.874659400545, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI28571809, Length=367, Percent_Identity=37.874659400545, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24583281, Length=358, Percent_Identity=33.7988826815642, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24583279, Length=358, Percent_Identity=33.7988826815642, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI17136814, Length=366, Percent_Identity=38.5245901639344, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI21355559, Length=393, Percent_Identity=35.3689567430025, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=34.2948717948718, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24581954, Length=350, Percent_Identity=32.5714285714286, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24581952, Length=350, Percent_Identity=32.5714285714286, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24581956, Length=350, Percent_Identity=32.5714285714286, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24666101, Length=363, Percent_Identity=31.6804407713499, Blast_Score=178, Evalue=5e-45, Organism=Drosophila melanogaster, GI24642822, Length=380, Percent_Identity=31.3157894736842, Blast_Score=172, Evalue=3e-43, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=30.08356545961, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI20130173, Length=457, Percent_Identity=28.8840262582057, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI24643725, Length=389, Percent_Identity=28.2776349614396, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24668515, Length=332, Percent_Identity=29.8192771084337, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI19920478, Length=366, Percent_Identity=30.6010928961749, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI28571338, Length=230, Percent_Identity=35.6521739130435, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI18859659, Length=230, Percent_Identity=35.6521739130435, Blast_Score=132, Evalue=5e-31, Organism=Drosophila melanogaster, GI17136666, Length=490, Percent_Identity=26.1224489795918, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24640164, Length=357, Percent_Identity=28.5714285714286, Blast_Score=129, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 48649; Mature: 48518
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCCCCHHHHHHHH QRLTMEGPKVAPNSIRALVLAPTRELADQVHESIRQYAEHLPLTTYAAYGGVSINPQMMK HHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCHHHHH LRRGVDVLVATPGRLLDLHRQNAVKFSQLQTLILDEADRMLDLGFAEELRGIYAVLPKQR HHCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC QTLLFSATFSDEIRLLAAQMLNDPLTIEVSPRNVAASSVKQWVVTVDKKRKADLFIHLMK CEEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH KHRWGQVLVFAKTRVGVDQLVDRLQALGMNADGIHGDKPQATRQRALDRFKSNEVKILVA HCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE TDVAARGLDIDDLPTVVNLDLPIVAEDYIHRIGRTGRAGLTGEAISLVCADEVELLSAIE ECHHHCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCHHEEEEEHHHHHHHHHHH VLTRQTLERKEEQDFEPEHRVPSTDASGQILKKPKKPKKSKVSGSKRNLGKWVDSGDSEP HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCHHHHHHHHCCCCCCC APVVKPVRKVPVFNTGPRKKKP CHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TFASLGLIEPLLRALEALGYQTPTPVQTQAIPPVLAGRDLMAAAQTGTGKTAGFALPLL CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCCCCHHHHHHHH QRLTMEGPKVAPNSIRALVLAPTRELADQVHESIRQYAEHLPLTTYAAYGGVSINPQMMK HHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCCCHHHHH LRRGVDVLVATPGRLLDLHRQNAVKFSQLQTLILDEADRMLDLGFAEELRGIYAVLPKQR HHCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC QTLLFSATFSDEIRLLAAQMLNDPLTIEVSPRNVAASSVKQWVVTVDKKRKADLFIHLMK CEEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH KHRWGQVLVFAKTRVGVDQLVDRLQALGMNADGIHGDKPQATRQRALDRFKSNEVKILVA HCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE TDVAARGLDIDDLPTVVNLDLPIVAEDYIHRIGRTGRAGLTGEAISLVCADEVELLSAIE ECHHHCCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCHHEEEEEHHHHHHHHHHH VLTRQTLERKEEQDFEPEHRVPSTDASGQILKKPKKPKKSKVSGSKRNLGKWVDSGDSEP HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCHHHHHHHHCCCCCCC APVVKPVRKVPVFNTGPRKKKP CHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]