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The map label for this gene is trg [C]

Identifier: 66047436

GI number: 66047436

Start: 5013079

End: 5014383

Strand: Reverse

Name: trg [C]

Synonym: Psyr_4209

Alternate gene names: 66047436

Gene position: 5014383-5013079 (Counterclockwise)

Preceding gene: 66047437

Following gene: 66047434

Centisome position: 82.29

GC content: 58.54

Gene sequence:

>1305_bases
ATGCTTCACCTGTTCAGCCCCCGTCGTGACAAAAAGGCCCTTCAGCAACTTATTTCCTCGCTCAAGGGCGGCACTGAGCC
CGCGGTAGGGGGATGTGCTGAAAAAAGTGCGGTACTGGAATGCTGGAGCTCGCTGAGCACCCAGCGTCGCCTCGACGAGC
AACGTATTGCCGCGCTTGAGCAAGAACTGGAAACCGCCCGCCATCTGTTGGGCGAAGCCTCTGCCTCGGCTGCCGCTTAT
GAAACCCGCTTTGATCTGGTCAACCGTGCGTCTAGCGAGGGCCTCTGGGATATGGAGGTGGTCGCGGGCGATCCGGTCAA
TCCGAACAATCGATTCTGGTGGTCGCAGCAATTTCGCACATTGCTCGGTTTCAACGACGAGCGCGATTTCCCCAACGTAC
TGGCGAGCTGGGCAGACCGGCTTCATCCTCAAGATAAACAAGCCTCGCTGGACGCATTTGCCAAACACCTGAATGACCGT
TCCGGCAACACGCCGTATCGGATCAAGAATCGTCTGGCGATGAAGGACGGCACCTACCGCTGGTTCTATGCCCAGGGCGA
AACATTAAGAGACGCACGCGGAACGCCGCTGCGGGTCGCCGGTTCTCTTCGGGATATTCACGACGAGCTTGAGCGTGATC
TTGAACACGATGTGATCATTACTCGCTTCGAACTCGCTCGGGAGATGCTCTCCGACGGTCTTTGGGACATGGAAGTCATT
GCCGGCGACCCGGTCAATGCGCGCAATCCTTTCTGGTGGTCCCCCCAGTTCAGGCGCCTGCTGGGTTTTGAAACGGTCGA
AGAGTTTCCTGACGTACTGGATAGCTGGGCGTCACGGCTGCACCCTGAAGACAAGGAGCGCAGTCTGACGGCATTCGGTG
CGCACTTGAATGACCGGACTGGCAAGACGCCGTTCGATATCGAGTACCGCCTGAAGATGAAAACTGGCGAGTATCGCTGG
TTCCGTGCGCGCGGCCAGACTCGCCGCAATCCCGAAGGTGTTCCGCTGAGGGTGGTCGGTGCGTTGGTGGATGTGCATTT
GAAACATGAGCAGGACGCTCTTCGCGATACCGAAGCACAGCATCAGAAAAACCTGGAAGAGAACATCGCTCAACTGACCC
AGATAGTTGGCACTATCCAGAGCATTGCCAGCCAGACCAACCTTCTGGCGCTCAATGCGGCAATCGAGGCTGCGCGCGCC
GGTGAGGCAGGGCGGGGCTTTGCGGTTGTGGCGGATGAAGTCCGCAAGCTGGCGACCAGAACGACCGAAGCGACGGAGCA
GGCGGCAAGCATGATGAGCCGCTGA

Upstream 100 bases:

>100_bases
TCTGATCGCAATCCGACATACAGAAACCTCACGGCATGTCGATAAAGAAGTGACATGCCAGGGACTCGGCAAATCCGACT
TTATTTTGAGAGCCCACAGC

Downstream 100 bases:

>100_bases
TAAAACCAGCGTTCGCTGGTTGATAGCGGAAAAAAAACGCCTCCGCAAGGGAGGCGTTTTTTCAACTCAGCACATCAGAT
ACATCAGGCCAGGTCGAAGC

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: ORFE [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MLHLFSPRRDKKALQQLISSLKGGTEPAVGGCAEKSAVLECWSSLSTQRRLDEQRIAALEQELETARHLLGEASASAAAY
ETRFDLVNRASSEGLWDMEVVAGDPVNPNNRFWWSQQFRTLLGFNDERDFPNVLASWADRLHPQDKQASLDAFAKHLNDR
SGNTPYRIKNRLAMKDGTYRWFYAQGETLRDARGTPLRVAGSLRDIHDELERDLEHDVIITRFELAREMLSDGLWDMEVI
AGDPVNARNPFWWSPQFRRLLGFETVEEFPDVLDSWASRLHPEDKERSLTAFGAHLNDRTGKTPFDIEYRLKMKTGEYRW
FRARGQTRRNPEGVPLRVVGALVDVHLKHEQDALRDTEAQHQKNLEENIAQLTQIVGTIQSIASQTNLLALNAAIEAARA
GEAGRGFAVVADEVRKLATRTTEATEQAASMMSR

Sequences:

>Translated_434_residues
MLHLFSPRRDKKALQQLISSLKGGTEPAVGGCAEKSAVLECWSSLSTQRRLDEQRIAALEQELETARHLLGEASASAAAY
ETRFDLVNRASSEGLWDMEVVAGDPVNPNNRFWWSQQFRTLLGFNDERDFPNVLASWADRLHPQDKQASLDAFAKHLNDR
SGNTPYRIKNRLAMKDGTYRWFYAQGETLRDARGTPLRVAGSLRDIHDELERDLEHDVIITRFELAREMLSDGLWDMEVI
AGDPVNARNPFWWSPQFRRLLGFETVEEFPDVLDSWASRLHPEDKERSLTAFGAHLNDRTGKTPFDIEYRLKMKTGEYRW
FRARGQTRRNPEGVPLRVVGALVDVHLKHEQDALRDTEAQHQKNLEENIAQLTQIVGTIQSIASQTNLLALNAAIEAARA
GEAGRGFAVVADEVRKLATRTTEATEQAASMMSR
>Mature_434_residues
MLHLFSPRRDKKALQQLISSLKGGTEPAVGGCAEKSAVLECWSSLSTQRRLDEQRIAALEQELETARHLLGEASASAAAY
ETRFDLVNRASSEGLWDMEVVAGDPVNPNNRFWWSQQFRTLLGFNDERDFPNVLASWADRLHPQDKQASLDAFAKHLNDR
SGNTPYRIKNRLAMKDGTYRWFYAQGETLRDARGTPLRVAGSLRDIHDELERDLEHDVIITRFELAREMLSDGLWDMEVI
AGDPVNARNPFWWSPQFRRLLGFETVEEFPDVLDSWASRLHPEDKERSLTAFGAHLNDRTGKTPFDIEYRLKMKTGEYRW
FRARGQTRRNPEGVPLRVVGALVDVHLKHEQDALRDTEAQHQKNLEENIAQLTQIVGTIQSIASQTNLLALNAAIEAARA
GEAGRGFAVVADEVRKLATRTTEATEQAASMMSR

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787690, Length=63, Percent_Identity=58.7301587301587, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI2367378, Length=77, Percent_Identity=49.3506493506493, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788195, Length=62, Percent_Identity=56.4516129032258, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789453, Length=62, Percent_Identity=64.5161290322581, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788194, Length=53, Percent_Identity=66.0377358490566, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR013655 [H]

Pfam domain/function: PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 49193; Mature: 49193

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLFSPRRDKKALQQLISSLKGGTEPAVGGCAEKSAVLECWSSLSTQRRLDEQRIAALE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QELETARHLLGEASASAAAYETRFDLVNRASSEGLWDMEVVAGDPVNPNNRFWWSQQFRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEHHHHHHH
LLGFNDERDFPNVLASWADRLHPQDKQASLDAFAKHLNDRSGNTPYRIKNRLAMKDGTYR
HHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCCEE
WFYAQGETLRDARGTPLRVAGSLRDIHDELERDLEHDVIITRFELAREMLSDGLWDMEVI
EEEECCCCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AGDPVNARNPFWWSPQFRRLLGFETVEEFPDVLDSWASRLHPEDKERSLTAFGAHLNDRT
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
GKTPFDIEYRLKMKTGEYRWFRARGQTRRNPEGVPLRVVGALVDVHLKHEQDALRDTEAQ
CCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HQKNLEENIAQLTQIVGTIQSIASQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLATR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TTEATEQAASMMSR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLHLFSPRRDKKALQQLISSLKGGTEPAVGGCAEKSAVLECWSSLSTQRRLDEQRIAALE
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QELETARHLLGEASASAAAYETRFDLVNRASSEGLWDMEVVAGDPVNPNNRFWWSQQFRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEEHHHHHHH
LLGFNDERDFPNVLASWADRLHPQDKQASLDAFAKHLNDRSGNTPYRIKNRLAMKDGTYR
HHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCCEE
WFYAQGETLRDARGTPLRVAGSLRDIHDELERDLEHDVIITRFELAREMLSDGLWDMEVI
EEEECCCCHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
AGDPVNARNPFWWSPQFRRLLGFETVEEFPDVLDSWASRLHPEDKERSLTAFGAHLNDRT
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
GKTPFDIEYRLKMKTGEYRWFRARGQTRRNPEGVPLRVVGALVDVHLKHEQDALRDTEAQ
CCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HQKNLEENIAQLTQIVGTIQSIASQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLATR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
TTEATEQAASMMSR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2013568 [H]