| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is secA [H]
Identifier: 66047321
GI number: 66047321
Start: 4880445
End: 4883186
Strand: Reverse
Name: secA [H]
Synonym: Psyr_4094
Alternate gene names: 66047321
Gene position: 4883186-4880445 (Counterclockwise)
Preceding gene: 66047323
Following gene: 66047320
Centisome position: 80.14
GC content: 58.24
Gene sequence:
>2742_bases ATGTTTGCGCCTTTGTTGAAAAAACTTTTTGGAAGCAAGAACGAGCGTGAAGTAAAACGCATGCTCAAGACGGTACAGAT CGTCAATGCCTTCGAAGAGCAAATGGTGGCCCTTTCGGACGAGCAACTGCGCGCCAAGACCGAAGAGTTCAAGGCCCGCA TAGCCAAAGGCGAAACCCTCGATCAATTGCTCCCGGAAGCCTTTGCTGTCGCTCGTGAAGCGGGCAAGCGCGTCATGGGC ATGCGCCACTTCGACGTCCAGTTGATCGGCGGCATGACCCTGCACGAAGGTCAGATCGCGGAAATGCGTACCGGTGAAGG TAAAACCCTGGTCGGTACGCTGGCTGTCTACCTCAACGCATTGTCCGGCAAGGGCGTTCACGTGGTTACCGTGAACGACT ACCTCGCTCGTCGCGACGCCAACTGGATGCGTCCGCTGTACGAATTCCTCGGTCTGACCGTAGGCATCGTCACGCCATTC CAGCCGCCGGAAGAGAAGCGCGCCGCCTACGCTGCCGATATCACGTACGGCACCAACAACGAATACGGTTTCGATTACCT GCGCGACAACATGGCGTTCAGCATGGACGACAAGTTCCAGCGTGAACTCAATTTTGCCGTGATCGACGAAGTCGACTCGA TTCTGATCGACGAAGCGCGTACGCCGCTGATCATCTCCGGTCAGGCTGAAGACAGCTCCAAGCTGTACACCGAAATCAAC CGCCTGATCCCCAAGCTCGAGCAGCATATCGAGGAAGTGGAAGGCGAAGTCACCAAGGCGGGTCATTTCACCGTTGACGA GAAAACCCGTCAGGTCGAACTGAACGAAGCCGGTCACCAGTTCATCGAGGAAATGCTCACCGAAGTCGGCCTGCTGGCCG AAGGCGAGAGCCTCTACTCGGCGCATAACCTGGGCCTGCTGACTCACGTCTATGCCGGTCTGCGTGCGCACAAGCTGTTC AACCGCAACGTCGAATACATCGTTTCGGATGGTCAGGTGCTGCTGGTTGACGAACACACCGGCCGGACCATGCCGGGCCG TCGCCTGTCCGAAGGTCTGCACCAGGCCATCGAAGCCAAGGAAGGTCTGAACATTCAGGCCGAAAGCCAGACCCTGGCAT CGACCACGTTCCAGAACTACTTCCGTCTGTACAACAAGCTGTCCGGCATGACCGGTACCGCCGACACCGAAGCGTTCGAA TTCCACCAGATCTACAACCTGGCCGTCATGGTCATCCCGCCGAACAAGCCTTTGGCGCGTAAGGACTTCAACGACCTGGT CTATCTGACGGCGGAAGAGAAGTACGCCGCCATCGTCACCGACATCAAGGCCTGCATCGCGGAAAACCGTCCGGTACTGG TCGGTACGGCGACCATCGAAACTTCCGAGCACATGTCCAATCTGCTCAACAAGGAAGGCATCGAGCACAAGGTTCTGAAC GCCAAGTTCCACGAAAAGGAAGCGGAAATCATTGCGCAGGCCGGTCGTCCGGGTGCGTTGACCATCGCCACCAACATGGC CGGTCGTGGTACCGACATCCTGCTGGGCGGCAACTGGGAAGTCGAGGTCGCCAATCTCGAAGACCCGACTCCCGAGCAGA TCGCGCAGATCAAGGCTGACTGGCAGAAGCGCCATCAGCAGGTGATCGAAGCGGGCGGCCTGCATGTTATCGCCTCCGAG CGTCACGAATCGCGTCGTATCGACAACCAGCTGCGCGGTCGTGCCGGCCGTCAGGGCGACACCGGCTCCAGCCGTTTCTA CCTGTCGCTCGAAGACAGCCTGATGCGCATCTTTGCCTCTGACCGGGTGAAGAACTTCATGAAGGCGCTGGGCATGCAGT CCGGCGAAGCGATCGAGCATCGCATGGTGACCAACGCCATCGAAAAAGCGCAGCGCAAGGTGGAAGGTCGTAACTTCGAC ATCCGCAAACAGTTGCTTGAATTCGATGACGTGGCCAACGAGCAGCGTAAAGTGATTTATCACATGCGTAACACGTTGCT GGCTGCCGAGAACATTGGCGAGACCATTGCCGACTTCCGCGAGGAAGTGCTCAACAACCTGATCAGCCAGCATATTCCGC CACAGTCCCTGCCGGAGCAGTGGAATGTTGCAGGCCTGGAATCGGCGCTCAATACCGACTTCGCGGTTCAACTGCCGATC CAGCAGTGGCTCGACGAAGACGACAAGCTGCACGAAGACAGCCTGCGCGAAAAAATCATGGCGCAGTTGCTGGTGGCGTA CAACGAGAAGGAAGACCAGGCCAGCGCCGAAGCGCTGCGCTCCTTCGAGAAGCAGATCCTCCTGCGCGTGCTGGACGACC TGTGGAAAGATCACCTGTCGACCATGGACCACCTGCGTCACGGTATTCACCTGCGCGGCTACGCTCAGAAGAACCCGAAG CAGGAATACAAGCGCGAGTCCTTCACGCTGTTCCAGGAACTGCTGGATTCGATCAAGCGCGACACCATCCGTGTGCTCTC GCATGTTCAGGTTCGTCGCGAAGATCCAGAGGAAGAAGAGGCACGCCTGCGTCAGGACGCCGAAGAGCTGGCCAGTCGCA TGCAGTTCGAACACGCGCCTGCACCGGGCATCGAACAGCCGCTGCTCGACGAAGAGGGTGGCGGAGCGCCTGTTGCCGTT GCATCCGAGCCGGTTCGCAACGACCAGAAACTGGGTCGCAACGAGCTGTGCTGGTGTGGTTCGGGCAAGAAATTCAAGCA CTGTCACGGCCAGATCAACTAA
Upstream 100 bases:
>100_bases TCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCATCTGGGCTGCACGGGCGACTCACGGGGCCGCCCTCCATTCCTAT GTGTGGAAGATCCTGTCGAT
Downstream 100 bases:
>100_bases GCCTTTGACCGTGTAATACCTGCGCCGCGACCGGCTTGCCCGTCGCGGCGTTTTTTCATTGAGCGCCGTACCGATGCGGA CGGCGCCACACTCCATGAGG
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MFAPLLKKLFGSKNEREVKRMLKTVQIVNAFEEQMVALSDEQLRAKTEEFKARIAKGETLDQLLPEAFAVAREAGKRVMG MRHFDVQLIGGMTLHEGQIAEMRTGEGKTLVGTLAVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLTVGIVTPF QPPEEKRAAYAADITYGTNNEYGFDYLRDNMAFSMDDKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYTEIN RLIPKLEQHIEEVEGEVTKAGHFTVDEKTRQVELNEAGHQFIEEMLTEVGLLAEGESLYSAHNLGLLTHVYAGLRAHKLF NRNVEYIVSDGQVLLVDEHTGRTMPGRRLSEGLHQAIEAKEGLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFE FHQIYNLAVMVIPPNKPLARKDFNDLVYLTAEEKYAAIVTDIKACIAENRPVLVGTATIETSEHMSNLLNKEGIEHKVLN AKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVANLEDPTPEQIAQIKADWQKRHQQVIEAGGLHVIASE RHESRRIDNQLRGRAGRQGDTGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFD IRKQLLEFDDVANEQRKVIYHMRNTLLAAENIGETIADFREEVLNNLISQHIPPQSLPEQWNVAGLESALNTDFAVQLPI QQWLDEDDKLHEDSLREKIMAQLLVAYNEKEDQASAEALRSFEKQILLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNPK QEYKRESFTLFQELLDSIKRDTIRVLSHVQVRREDPEEEEARLRQDAEELASRMQFEHAPAPGIEQPLLDEEGGGAPVAV ASEPVRNDQKLGRNELCWCGSGKKFKHCHGQIN
Sequences:
>Translated_913_residues MFAPLLKKLFGSKNEREVKRMLKTVQIVNAFEEQMVALSDEQLRAKTEEFKARIAKGETLDQLLPEAFAVAREAGKRVMG MRHFDVQLIGGMTLHEGQIAEMRTGEGKTLVGTLAVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLTVGIVTPF QPPEEKRAAYAADITYGTNNEYGFDYLRDNMAFSMDDKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYTEIN RLIPKLEQHIEEVEGEVTKAGHFTVDEKTRQVELNEAGHQFIEEMLTEVGLLAEGESLYSAHNLGLLTHVYAGLRAHKLF NRNVEYIVSDGQVLLVDEHTGRTMPGRRLSEGLHQAIEAKEGLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFE FHQIYNLAVMVIPPNKPLARKDFNDLVYLTAEEKYAAIVTDIKACIAENRPVLVGTATIETSEHMSNLLNKEGIEHKVLN AKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVANLEDPTPEQIAQIKADWQKRHQQVIEAGGLHVIASE RHESRRIDNQLRGRAGRQGDTGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFD IRKQLLEFDDVANEQRKVIYHMRNTLLAAENIGETIADFREEVLNNLISQHIPPQSLPEQWNVAGLESALNTDFAVQLPI QQWLDEDDKLHEDSLREKIMAQLLVAYNEKEDQASAEALRSFEKQILLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNPK QEYKRESFTLFQELLDSIKRDTIRVLSHVQVRREDPEEEEARLRQDAEELASRMQFEHAPAPGIEQPLLDEEGGGAPVAV ASEPVRNDQKLGRNELCWCGSGKKFKHCHGQIN >Mature_913_residues MFAPLLKKLFGSKNEREVKRMLKTVQIVNAFEEQMVALSDEQLRAKTEEFKARIAKGETLDQLLPEAFAVAREAGKRVMG MRHFDVQLIGGMTLHEGQIAEMRTGEGKTLVGTLAVYLNALSGKGVHVVTVNDYLARRDANWMRPLYEFLGLTVGIVTPF QPPEEKRAAYAADITYGTNNEYGFDYLRDNMAFSMDDKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYTEIN RLIPKLEQHIEEVEGEVTKAGHFTVDEKTRQVELNEAGHQFIEEMLTEVGLLAEGESLYSAHNLGLLTHVYAGLRAHKLF NRNVEYIVSDGQVLLVDEHTGRTMPGRRLSEGLHQAIEAKEGLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFE FHQIYNLAVMVIPPNKPLARKDFNDLVYLTAEEKYAAIVTDIKACIAENRPVLVGTATIETSEHMSNLLNKEGIEHKVLN AKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVANLEDPTPEQIAQIKADWQKRHQQVIEAGGLHVIASE RHESRRIDNQLRGRAGRQGDTGSSRFYLSLEDSLMRIFASDRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFD IRKQLLEFDDVANEQRKVIYHMRNTLLAAENIGETIADFREEVLNNLISQHIPPQSLPEQWNVAGLESALNTDFAVQLPI QQWLDEDDKLHEDSLREKIMAQLLVAYNEKEDQASAEALRSFEKQILLRVLDDLWKDHLSTMDHLRHGIHLRGYAQKNPK QEYKRESFTLFQELLDSIKRDTIRVLSHVQVRREDPEEEEARLRQDAEELASRMQFEHAPAPGIEQPLLDEEGGGAPVAV ASEPVRNDQKLGRNELCWCGSGKKFKHCHGQIN
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=913, Percent_Identity=62.3220153340635, Blast_Score=1162, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 103259; Mature: 103259
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAPLLKKLFGSKNEREVKRMLKTVQIVNAFEEQMVALSDEQLRAKTEEFKARIAKGETL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHH DQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGQIAEMRTGEGKTLVGTLAVYLNA HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCHHHCCCCCCCHHHHHHHHHHHH LSGKGVHVVTVNDYLARRDANWMRPLYEFLGLTVGIVTPFQPPEEKRAAYAADITYGTNN CCCCCEEEEEECHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHCEEEEEEEECCCC EYGFDYLRDNMAFSMDDKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYTEIN CCCHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH RLIPKLEQHIEEVEGEVTKAGHFTVDEKTRQVELNEAGHQFIEEMLTEVGLLAEGESLYS HHHHHHHHHHHHHCCCCCCCCCEEECCCHHEEEHHHHHHHHHHHHHHHHCCCCCCHHHHH AHNLGLLTHVYAGLRAHKLFNRNVEYIVSDGQVLLVDEHTGRTMPGRRLSEGLHQAIEAK HHCCHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHH EGLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFEFHQIYNLAVMVIPPNKPLAR CCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEEEEECCCCCCCC KDFNDLVYLTAEEKYAAIVTDIKACIAENRPVLVGTATIETSEHMSNLLNKEGIEHKVLN CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCHHHHC AKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVANLEDPTPEQIAQIKAD CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHH WQKRHQQVIEAGGLHVIASERHESRRIDNQLRGRAGRQGDTGSSRFYLSLEDSLMRIFAS HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVANEQRKVIY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH HMRNTLLAAENIGETIADFREEVLNNLISQHIPPQSLPEQWNVAGLESALNTDFAVQLPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECH QQWLDEDDKLHEDSLREKIMAQLLVAYNEKEDQASAEALRSFEKQILLRVLDDLWKDHLS HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMDHLRHGIHLRGYAQKNPKQEYKRESFTLFQELLDSIKRDTIRVLSHVQVRREDPEEEE HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ARLRQDAEELASRMQFEHAPAPGIEQPLLDEEGGGAPVAVASEPVRNDQKLGRNELCWCG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCEEEEC SGKKFKHCHGQIN CCCCHHCCCCCCC >Mature Secondary Structure MFAPLLKKLFGSKNEREVKRMLKTVQIVNAFEEQMVALSDEQLRAKTEEFKARIAKGETL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHH DQLLPEAFAVAREAGKRVMGMRHFDVQLIGGMTLHEGQIAEMRTGEGKTLVGTLAVYLNA HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCHHHCCCCCCCHHHHHHHHHHHH LSGKGVHVVTVNDYLARRDANWMRPLYEFLGLTVGIVTPFQPPEEKRAAYAADITYGTNN CCCCCEEEEEECHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCHHHHCEEEEEEEECCCC EYGFDYLRDNMAFSMDDKFQRELNFAVIDEVDSILIDEARTPLIISGQAEDSSKLYTEIN CCCHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH RLIPKLEQHIEEVEGEVTKAGHFTVDEKTRQVELNEAGHQFIEEMLTEVGLLAEGESLYS HHHHHHHHHHHHHCCCCCCCCCEEECCCHHEEEHHHHHHHHHHHHHHHHCCCCCCHHHHH AHNLGLLTHVYAGLRAHKLFNRNVEYIVSDGQVLLVDEHTGRTMPGRRLSEGLHQAIEAK HHCCHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHH EGLNIQAESQTLASTTFQNYFRLYNKLSGMTGTADTEAFEFHQIYNLAVMVIPPNKPLAR CCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEEEEECCCCCCCC KDFNDLVYLTAEEKYAAIVTDIKACIAENRPVLVGTATIETSEHMSNLLNKEGIEHKVLN CCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCHHHHC AKFHEKEAEIIAQAGRPGALTIATNMAGRGTDILLGGNWEVEVANLEDPTPEQIAQIKAD CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHH WQKRHQQVIEAGGLHVIASERHESRRIDNQLRGRAGRQGDTGSSRFYLSLEDSLMRIFAS HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVKNFMKALGMQSGEAIEHRMVTNAIEKAQRKVEGRNFDIRKQLLEFDDVANEQRKVIY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH HMRNTLLAAENIGETIADFREEVLNNLISQHIPPQSLPEQWNVAGLESALNTDFAVQLPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEECH QQWLDEDDKLHEDSLREKIMAQLLVAYNEKEDQASAEALRSFEKQILLRVLDDLWKDHLS HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMDHLRHGIHLRGYAQKNPKQEYKRESFTLFQELLDSIKRDTIRVLSHVQVRREDPEEEE HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ARLRQDAEELASRMQFEHAPAPGIEQPLLDEEGGGAPVAVASEPVRNDQKLGRNELCWCG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCEEEEC SGKKFKHCHGQIN CCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA