Click here to switch to the map view.

The map label for this gene is 66047281

Identifier: 66047281

GI number: 66047281

Start: 4836751

End: 4837512

Strand: Reverse

Name: 66047281

Synonym: Psyr_4054

Alternate gene names: NA

Gene position: 4837512-4836751 (Counterclockwise)

Preceding gene: 66047282

Following gene: 66047277

Centisome position: 79.39

GC content: 58.01

Gene sequence:

>762_bases
ATGAATGGAATCAAAGAGATGCACACCGATATGCACAAAGACACAACCGAAAAAGATGGGTTCGTTGCTGAAGAACTTCA
GCCCATGCATCTTGAGTATCCGGTATCAATCAAGCCAAAGGTAAACGTCAAACCCCCGGTCAAGGCGAAAGATCCAGTCA
AACCGCCGGTCAAGAAAACGGACCCGGTCAAGCCGCCTGTGAAACCGCCGGTCAAGACAACGGACCCGGTCAAGCCGCCT
GTGAAACCGCCGGTCAAGACCACGAACCCGGTCGAGCCGCCTGTGAAACCGCCGGTCAAGACAACGGACCCCGTCAAGCC
GCCAGTCAAACCGCAGGTCAAGCCCTCTACCAGTGAGCCGGTAGCGCAGACGGTGCCCCCGGTGCCTGCTGCATCTTCGC
GTCTGGACAAACTACTGGCAGTCGTCAACACCGCAACGGGCGTCCTGCAACTGGTCCAGCCGCCCAACAGCGTGAACAAC
GCGGACGGTACTGTCAGCTATCCGAACGGCAGCGTCGAGTCTGCAGATGGTCAATCCGTCACCCATTCTGACGGAGCCGT
GCAGAACCTTGACGGCACGACCGTGCATGCCGATGGTTCTACAGAGCACCCCAATGGTGATATCCAGCACAAGGATGGAA
CCTGGGTTTTTGCGGATGGCTCGGTCAACTACCCGGACGGTCGCTGGAAGATGGCGGATGGCACGATCACCGACGCCGAA
GGCAATGTACTAGGTACAGTCAAGCCTGACGTTGCGCCGTAG

Upstream 100 bases:

>100_bases
CAGGTGGCCCGGTTTTTTTGCACTCGCTAGATAGTTATATGCCTGCCAGTGGAGGGAGGGCTTACGCTTGCGTTTCAGTT
AAATAAATGGAGTTTCAATA

Downstream 100 bases:

>100_bases
CGGTTACCCTTACACGGGCGATAAAAAAACCCTGACTCTTGCGAGTCAGGGTTTTTTGCCTTGCAGTAACGTTTTACAGG
CGCGGGTAGTCGATGTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNGIKEMHTDMHKDTTEKDGFVAEELQPMHLEYPVSIKPKVNVKPPVKAKDPVKPPVKKTDPVKPPVKPPVKTTDPVKPP
VKPPVKTTNPVEPPVKPPVKTTDPVKPPVKPQVKPSTSEPVAQTVPPVPAASSRLDKLLAVVNTATGVLQLVQPPNSVNN
ADGTVSYPNGSVESADGQSVTHSDGAVQNLDGTTVHADGSTEHPNGDIQHKDGTWVFADGSVNYPDGRWKMADGTITDAE
GNVLGTVKPDVAP

Sequences:

>Translated_253_residues
MNGIKEMHTDMHKDTTEKDGFVAEELQPMHLEYPVSIKPKVNVKPPVKAKDPVKPPVKKTDPVKPPVKPPVKTTDPVKPP
VKPPVKTTNPVEPPVKPPVKTTDPVKPPVKPQVKPSTSEPVAQTVPPVPAASSRLDKLLAVVNTATGVLQLVQPPNSVNN
ADGTVSYPNGSVESADGQSVTHSDGAVQNLDGTTVHADGSTEHPNGDIQHKDGTWVFADGSVNYPDGRWKMADGTITDAE
GNVLGTVKPDVAP
>Mature_253_residues
MNGIKEMHTDMHKDTTEKDGFVAEELQPMHLEYPVSIKPKVNVKPPVKAKDPVKPPVKKTDPVKPPVKPPVKTTDPVKPP
VKPPVKTTNPVEPPVKPPVKTTDPVKPPVKPQVKPSTSEPVAQTVPPVPAASSRLDKLLAVVNTATGVLQLVQPPNSVNN
ADGTVSYPNGSVESADGQSVTHSDGAVQNLDGTTVHADGSTEHPNGDIQHKDGTWVFADGSVNYPDGRWKMADGTITDAE
GNVLGTVKPDVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26785; Mature: 26785

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGIKEMHTDMHKDTTEKDGFVAEELQPMHLEYPVSIKPKVNVKPPVKAKDPVKPPVKKT
CCCHHHHHHHHHCCCCCCCCEEHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPVKPPVKPPVKTTDPVKPPVKPPVKTTNPVEPPVKPPVKTTDPVKPPVKPQVKPSTSEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VAQTVPPVPAASSRLDKLLAVVNTATGVLQLVQPPNSVNNADGTVSYPNGSVESADGQSV
HHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEE
THSDGAVQNLDGTTVHADGSTEHPNGDIQHKDGTWVFADGSVNYPDGRWKMADGTITDAE
ECCCCCEECCCCCEEECCCCCCCCCCCEEECCCCEEEECCEEECCCCCEEECCCEEECCC
GNVLGTVKPDVAP
CCEEEECCCCCCC
>Mature Secondary Structure
MNGIKEMHTDMHKDTTEKDGFVAEELQPMHLEYPVSIKPKVNVKPPVKAKDPVKPPVKKT
CCCHHHHHHHHHCCCCCCCCEEHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
DPVKPPVKPPVKTTDPVKPPVKPPVKTTNPVEPPVKPPVKTTDPVKPPVKPQVKPSTSEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VAQTVPPVPAASSRLDKLLAVVNTATGVLQLVQPPNSVNNADGTVSYPNGSVESADGQSV
HHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEE
THSDGAVQNLDGTTVHADGSTEHPNGDIQHKDGTWVFADGSVNYPDGRWKMADGTITDAE
ECCCCCEECCCCCEEECCCCCCCCCCCEEECCCCEEEECCEEECCCCCEEECCCEEECCC
GNVLGTVKPDVAP
CCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA