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The map label for this gene is ybfO [C]

Identifier: 66047259

GI number: 66047259

Start: 4801339

End: 4804101

Strand: Reverse

Name: ybfO [C]

Synonym: Psyr_4032

Alternate gene names: 66047259

Gene position: 4804101-4801339 (Counterclockwise)

Preceding gene: 66047260

Following gene: 66047257

Centisome position: 78.84

GC content: 55.23

Gene sequence:

>2763_bases
ATGAAGGTCATGAGTTCGATTGTGCACAGCAATACGCCGCTACTGGTGGTCATTGATCCGCGTGCGCTGGTTGTGCGTAG
CGTGCAGTTCTGTCGAACTGTGGCCGGGCAGCCTCTTGCCGCGCGGGTGACCCATCAGCGCTATGACCGGGCAGGGCGTC
CGGTTGTCGGTCGTGATCCGCGTCTGTTCAGTCGCTCGGAAACCGAAGCGCAGACCCCGGCAAACCGGGTGGTCAGGTTC
AGTCTGTCCGGAGCGGCTTTGCTGAGTGAAAGCGTCGACTCGGGTTGGCGACTGAACCTGATGGGCGAGGCCGGGCAGTT
GCTTGAAAGCTGCGATGGGCGAGGCACTCAGCGCTTGATGGAATACGACAGTTCGTTGCGCCCGGTCTCTGTGACAGAGC
AGGGGCTTGTCGTCGAACGCCTGGCCTATGGTGGTGCCGACGCCGCTGAGCATAACCAGTGCAATCAACTGATTCGCCAT
GACGATACGGCAGGCTCGCGTTTGCTGCATGATTACGGCCTGCCTGGCGCTGCGCTGGGTGAGGAACGGCATTTTTTGCA
AGCGCCTGAAAGTCCGGACTGGCCGCTGGGCGAAGCAGAGCGCGATGCATTGCTTGAGCCTGTCGGGCTGCAAACCCGCT
GTGGGGTCAATGCGCTGGGCGAAGCGATCTGGCAGACCGATGCCATGGGCAATACACAGGCCTTTGGCCTGACCGTCGCT
GGGCAGTTGAAAGCGGCTGAACTGACATTGGCCGGTGCCTCACCACCGCAAACGCTGGTCGGTGAAATTCATTACAACGC
GCTTGACCAGGTCGAGCAGGAAACGGCCGGCAATGGTGTTGTCAGTCACTTCCAATATGATCCGCAGGACAGCCGGCTCG
CTGCACTCAGCGCGATGGCGGCGGATGGCGCGCTATTGCAAAAGCTGATTTACAGCTATGACCCGGTCGGTAATGTTCTG
GTGGTCAACGATGCGTCCCAGCCAGACCGTTATTGCAACAACCAGCTCGTCGAGCCGATCAGTCGCTTCGAGTACGACAC
GCTGTATCAGCTGATCGAAGCCAGCGGCTGTGAAGTCAGAAACGGTGTCAGCCATGGCCCGGCGTTGCCGGGCCTGCAAT
CTCTGCCGACGGATGACCCGTGTCAGGTCAGCAACTACACACAGCGTTACCGCTACGACGCTGCGGGTAATCTGCTGCAA
ATGCGCCACGAGGGCGCGCACAACTTCACCCGCAACATGCACGTTGATCCCGACAGCAATCGCAGCCTGCCCGACGATGA
AGGAGAAGTGGATTTCGCCACAAGTTTCGACGCCAACGGCAACCTGTTGCAACTCGTGCGTGGGCAGACCATGAGCTGGG
ATGCGCGTAATCAGTTGCAGCACATCACCACCGTGCAACGTGAAGACCAGCCGAACGATGAAGAGCGTTATATCTACGAT
GGGCAGGGTCAGCGTTGTCGCAAGATCAGCACCGCACAGGCATCAGGTCGCACACTGACCAACGAAGTGCGCTACCTGCC
GGGGCTGGAAATCCGCACCACAGCCGATGGCGAAACCCTTCACGTTATTAATACTCAGGCGGGTCGCAACAGCGTGCGGG
TGTTGCACTGGGAAGCGGGAAAACCAGATGCTGTTGCGAACGATCAGGTGCGTTACAGCCTGGGTGATCATCTGGGCTCG
AGCACGCTGGAGCTTGATCAGCAAGGCGGCCTGATCAGCCAGGAAAGTTATTATCCGTTTGGCGGCACGGCCTGGTGGGC
GGCGCGCAGTTCAGTAGAAGCCAAGTACAAAACAGTTCGTTACTCGGGTAAAGAACGCGATGCCAGCGGGCTTTATTATT
ACGGGTTCAGGTATTACGCGCCGTGGTTGCAAAGGTGGATCAATCCGGACCCGGCGGGGGATGTGGATGGGTTGAATCTT
TATCAGTTCATCGCAAACTCACCTGTTAATTACCGAGATGCATCGGGACTCGCGAAATACAAAACAAAATACGACATGAC
AGAATTAGAGGTGCGTTTAAAGAGGGGGCCTATTTTGAGCCGCGGGCTTACGGACCTTCAAAAAAATAATAGTGACACAG
CGGGTACGTTAAGAAACGCAATTGATTATGCAGTGACAGCGACTGCCGAGGCGATCAAGGCACTGGAGAACCCCGAGCTC
GCTAACGCCTCTGCGCTGGCAGATCAAATACTGGGGGGGCAGGATTCTAACCATGATGTGCTATTAAACAACGTCAGAAC
CCTTCATGCCGCTGCAATCAGTTACAAAAATGAAAATGCCGAGCAGCTGGTGGTTGTAAAAAGCAAGGTGCCCACTGAGC
TTGCTTTTGTCATGAAGGGTGACCCTCACGAGCGAATATTTTTCACGGAAGCAGGGCTAAAAGAATCAAAAAAAGTAATG
GCCATGACGTTTATTCACGAGCTTTCACATATAAAGCTAAACACTGAAGATTTCTATTACTATCGAAAAGGACACACCAT
AAATCCTAATAGCCAAGACACCTCGGAGGAAGCCTACGAAGTCGGAGCAGGGTTGCATGACAAAAAGCTCGCCACAACCT
CTGAAAAAAACGTTTCCAAAAAAACGTTGCTGTCACTCGTCGGCAGCACACACGCCAGCGATGTCGAAAAAAAACTGCAG
ACCGATAAAACACTCAGGAGCAACCTGCTTTTACGTAACGCAGACACCTGGGCGCTGCTCATATTTTCCTATGCGCACTC
TGCACTTTGGCGCCTGGATCTTAGAGAACAAGTGGGAGAGTAA

Upstream 100 bases:

>100_bases
GTCCGGTCTGTATTTGAAGTATGAGCTTGATTTTTCGTGCTGCACGTCCGTGCACTGATCCTGTCAGGCAGGAAATAGTG
TTCTTATCAAACTTTCATGG

Downstream 100 bases:

>100_bases
GCACACTGTTACTTTTAATGATGACAGCTTTTTTGCTGCTCACTCAGGTACGAGTGTGTTAACTAATATAACGAGTGAAG
GAAGCGAGCGATATGAGGAA

Product: YD repeat-containing protein

Products: NA

Alternate protein names: Insecticidal xin Complex; Insecticidal xin Protein; YD Repeat Protein; Insecticidal xin Complex Protein; Rhs Family Protein; C Component Of Insecticidal xin Complex; Rhs Family Protein-Like Protein; Insecticidal xin; Rhs-Related Protein; Zinc Finger C2H2-Type Domain-Containing Protein; FG-GAP Repeat Protein; Insecticidal xin SepC/Tcc Class; Insecticial xin; YD Repeat-/RHS Repeat-Containing Protein; Integrins Alpha Chain; Insecticidal xin Complex-Like Protein; Insecticial xin Complex; Yd Repeat-Containing Protein; Cytoplasmic Membrane Protein; Insecticidal xin SepC/TccC; Peptidase; Insecticidal xin Complex Protein TcaC; RHS-Related Protein; Insecticidal xin Complex TccC; Truncated Rhs Family Protein; Insecticidal xin Complex Protein Tccc; RhsA Protein

Number of amino acids: Translated: 920; Mature: 920

Protein sequence:

>920_residues
MKVMSSIVHSNTPLLVVIDPRALVVRSVQFCRTVAGQPLAARVTHQRYDRAGRPVVGRDPRLFSRSETEAQTPANRVVRF
SLSGAALLSESVDSGWRLNLMGEAGQLLESCDGRGTQRLMEYDSSLRPVSVTEQGLVVERLAYGGADAAEHNQCNQLIRH
DDTAGSRLLHDYGLPGAALGEERHFLQAPESPDWPLGEAERDALLEPVGLQTRCGVNALGEAIWQTDAMGNTQAFGLTVA
GQLKAAELTLAGASPPQTLVGEIHYNALDQVEQETAGNGVVSHFQYDPQDSRLAALSAMAADGALLQKLIYSYDPVGNVL
VVNDASQPDRYCNNQLVEPISRFEYDTLYQLIEASGCEVRNGVSHGPALPGLQSLPTDDPCQVSNYTQRYRYDAAGNLLQ
MRHEGAHNFTRNMHVDPDSNRSLPDDEGEVDFATSFDANGNLLQLVRGQTMSWDARNQLQHITTVQREDQPNDEERYIYD
GQGQRCRKISTAQASGRTLTNEVRYLPGLEIRTTADGETLHVINTQAGRNSVRVLHWEAGKPDAVANDQVRYSLGDHLGS
STLELDQQGGLISQESYYPFGGTAWWAARSSVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGDVDGLNL
YQFIANSPVNYRDASGLAKYKTKYDMTELEVRLKRGPILSRGLTDLQKNNSDTAGTLRNAIDYAVTATAEAIKALENPEL
ANASALADQILGGQDSNHDVLLNNVRTLHAAAISYKNENAEQLVVVKSKVPTELAFVMKGDPHERIFFTEAGLKESKKVM
AMTFIHELSHIKLNTEDFYYYRKGHTINPNSQDTSEEAYEVGAGLHDKKLATTSEKNVSKKTLLSLVGSTHASDVEKKLQ
TDKTLRSNLLLRNADTWALLIFSYAHSALWRLDLREQVGE

Sequences:

>Translated_920_residues
MKVMSSIVHSNTPLLVVIDPRALVVRSVQFCRTVAGQPLAARVTHQRYDRAGRPVVGRDPRLFSRSETEAQTPANRVVRF
SLSGAALLSESVDSGWRLNLMGEAGQLLESCDGRGTQRLMEYDSSLRPVSVTEQGLVVERLAYGGADAAEHNQCNQLIRH
DDTAGSRLLHDYGLPGAALGEERHFLQAPESPDWPLGEAERDALLEPVGLQTRCGVNALGEAIWQTDAMGNTQAFGLTVA
GQLKAAELTLAGASPPQTLVGEIHYNALDQVEQETAGNGVVSHFQYDPQDSRLAALSAMAADGALLQKLIYSYDPVGNVL
VVNDASQPDRYCNNQLVEPISRFEYDTLYQLIEASGCEVRNGVSHGPALPGLQSLPTDDPCQVSNYTQRYRYDAAGNLLQ
MRHEGAHNFTRNMHVDPDSNRSLPDDEGEVDFATSFDANGNLLQLVRGQTMSWDARNQLQHITTVQREDQPNDEERYIYD
GQGQRCRKISTAQASGRTLTNEVRYLPGLEIRTTADGETLHVINTQAGRNSVRVLHWEAGKPDAVANDQVRYSLGDHLGS
STLELDQQGGLISQESYYPFGGTAWWAARSSVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGDVDGLNL
YQFIANSPVNYRDASGLAKYKTKYDMTELEVRLKRGPILSRGLTDLQKNNSDTAGTLRNAIDYAVTATAEAIKALENPEL
ANASALADQILGGQDSNHDVLLNNVRTLHAAAISYKNENAEQLVVVKSKVPTELAFVMKGDPHERIFFTEAGLKESKKVM
AMTFIHELSHIKLNTEDFYYYRKGHTINPNSQDTSEEAYEVGAGLHDKKLATTSEKNVSKKTLLSLVGSTHASDVEKKLQ
TDKTLRSNLLLRNADTWALLIFSYAHSALWRLDLREQVGE
>Mature_920_residues
MKVMSSIVHSNTPLLVVIDPRALVVRSVQFCRTVAGQPLAARVTHQRYDRAGRPVVGRDPRLFSRSETEAQTPANRVVRF
SLSGAALLSESVDSGWRLNLMGEAGQLLESCDGRGTQRLMEYDSSLRPVSVTEQGLVVERLAYGGADAAEHNQCNQLIRH
DDTAGSRLLHDYGLPGAALGEERHFLQAPESPDWPLGEAERDALLEPVGLQTRCGVNALGEAIWQTDAMGNTQAFGLTVA
GQLKAAELTLAGASPPQTLVGEIHYNALDQVEQETAGNGVVSHFQYDPQDSRLAALSAMAADGALLQKLIYSYDPVGNVL
VVNDASQPDRYCNNQLVEPISRFEYDTLYQLIEASGCEVRNGVSHGPALPGLQSLPTDDPCQVSNYTQRYRYDAAGNLLQ
MRHEGAHNFTRNMHVDPDSNRSLPDDEGEVDFATSFDANGNLLQLVRGQTMSWDARNQLQHITTVQREDQPNDEERYIYD
GQGQRCRKISTAQASGRTLTNEVRYLPGLEIRTTADGETLHVINTQAGRNSVRVLHWEAGKPDAVANDQVRYSLGDHLGS
STLELDQQGGLISQESYYPFGGTAWWAARSSVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGDVDGLNL
YQFIANSPVNYRDASGLAKYKTKYDMTELEVRLKRGPILSRGLTDLQKNNSDTAGTLRNAIDYAVTATAEAIKALENPEL
ANASALADQILGGQDSNHDVLLNNVRTLHAAAISYKNENAEQLVVVKSKVPTELAFVMKGDPHERIFFTEAGLKESKKVM
AMTFIHELSHIKLNTEDFYYYRKGHTINPNSQDTSEEAYEVGAGLHDKKLATTSEKNVSKKTLLSLVGSTHASDVEKKLQ
TDKTLRSNLLLRNADTWALLIFSYAHSALWRLDLREQVGE

Specific function: Unknown

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 101709; Mature: 101709

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVMSSIVHSNTPLLVVIDPRALVVRSVQFCRTVAGQPLAARVTHQRYDRAGRPVVGRDP
CCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
RLFSRSETEAQTPANRVVRFSLSGAALLSESVDSGWRLNLMGEAGQLLESCDGRGTQRLM
CCCCCCCCHHCCCCCCEEEEECCCHHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHHH
EYDSSLRPVSVTEQGLVVERLAYGGADAAEHNQCNQLIRHDDTAGSRLLHDYGLPGAALG
HHCCCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
EERHFLQAPESPDWPLGEAERDALLEPVGLQTRCGVNALGEAIWQTDAMGNTQAFGLTVA
CCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEE
GQLKAAELTLAGASPPQTLVGEIHYNALDQVEQETAGNGVVSHFQYDPQDSRLAALSAMA
CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH
ADGALLQKLIYSYDPVGNVLVVNDASQPDRYCNNQLVEPISRFEYDTLYQLIEASGCEVR
HHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH
NGVSHGPALPGLQSLPTDDPCQVSNYTQRYRYDAAGNLLQMRHEGAHNFTRNMHVDPDSN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC
RSLPDDEGEVDFATSFDANGNLLQLVRGQTMSWDARNQLQHITTVQREDQPNDEERYIYD
CCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEC
GQGQRCRKISTAQASGRTLTNEVRYLPGLEIRTTADGETLHVINTQAGRNSVRVLHWEAG
CCCCHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCEEEEEECCC
KPDAVANDQVRYSLGDHLGSSTLELDQQGGLISQESYYPFGGTAWWAARSSVEAKYKTVR
CCCCCCCCCEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHEEE
YSGKERDASGLYYYGFRYYAPWLQRWINPDPAGDVDGLNLYQFIANSPVNYRDASGLAKY
ECCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHH
KTKYDMTELEVRLKRGPILSRGLTDLQKNNSDTAGTLRNAIDYAVTATAEAIKALENPEL
HHHCCHHHHHHHHHCCCCHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANASALADQILGGQDSNHDVLLNNVRTLHAAAISYKNENAEQLVVVKSKVPTELAFVMKG
CCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECC
DPHERIFFTEAGLKESKKVMAMTFIHELSHIKLNTEDFYYYRKGHTINPNSQDTSEEAYE
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCHHHHHH
VGAGLHDKKLATTSEKNVSKKTLLSLVGSTHASDVEKKLQTDKTLRSNLLLRNADTWALL
HCCCCCCCCCCCCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCHHHHH
IFSYAHSALWRLDLREQVGE
HHHHHHHHHHHEEHHHHHCC
>Mature Secondary Structure
MKVMSSIVHSNTPLLVVIDPRALVVRSVQFCRTVAGQPLAARVTHQRYDRAGRPVVGRDP
CCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
RLFSRSETEAQTPANRVVRFSLSGAALLSESVDSGWRLNLMGEAGQLLESCDGRGTQRLM
CCCCCCCCHHCCCCCCEEEEECCCHHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHHH
EYDSSLRPVSVTEQGLVVERLAYGGADAAEHNQCNQLIRHDDTAGSRLLHDYGLPGAALG
HHCCCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
EERHFLQAPESPDWPLGEAERDALLEPVGLQTRCGVNALGEAIWQTDAMGNTQAFGLTVA
CCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEE
GQLKAAELTLAGASPPQTLVGEIHYNALDQVEQETAGNGVVSHFQYDPQDSRLAALSAMA
CCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH
ADGALLQKLIYSYDPVGNVLVVNDASQPDRYCNNQLVEPISRFEYDTLYQLIEASGCEVR
HHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHH
NGVSHGPALPGLQSLPTDDPCQVSNYTQRYRYDAAGNLLQMRHEGAHNFTRNMHVDPDSN
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC
RSLPDDEGEVDFATSFDANGNLLQLVRGQTMSWDARNQLQHITTVQREDQPNDEERYIYD
CCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEC
GQGQRCRKISTAQASGRTLTNEVRYLPGLEIRTTADGETLHVINTQAGRNSVRVLHWEAG
CCCCHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCEEEEEECCC
KPDAVANDQVRYSLGDHLGSSTLELDQQGGLISQESYYPFGGTAWWAARSSVEAKYKTVR
CCCCCCCCCEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHEEE
YSGKERDASGLYYYGFRYYAPWLQRWINPDPAGDVDGLNLYQFIANSPVNYRDASGLAKY
ECCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHH
KTKYDMTELEVRLKRGPILSRGLTDLQKNNSDTAGTLRNAIDYAVTATAEAIKALENPEL
HHHCCHHHHHHHHHCCCCHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ANASALADQILGGQDSNHDVLLNNVRTLHAAAISYKNENAEQLVVVKSKVPTELAFVMKG
CCHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECC
DPHERIFFTEAGLKESKKVMAMTFIHELSHIKLNTEDFYYYRKGHTINPNSQDTSEEAYE
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCCCCCCCHHHHHH
VGAGLHDKKLATTSEKNVSKKTLLSLVGSTHASDVEKKLQTDKTLRSNLLLRNADTWALL
HCCCCCCCCCCCCCHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCCHHHHH
IFSYAHSALWRLDLREQVGE
HHHHHHHHHHHEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA