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The map label for this gene is ndoR [H]

Identifier: 66047257

GI number: 66047257

Start: 4798356

End: 4799294

Strand: Reverse

Name: ndoR [H]

Synonym: Psyr_4030

Alternate gene names: 66047257

Gene position: 4799294-4798356 (Counterclockwise)

Preceding gene: 66047259

Following gene: 66047255

Centisome position: 78.76

GC content: 64.86

Gene sequence:

>939_bases
ATGCCTCAATTGCATGTGGGTGAGCTTAGCTGGTCGGTGACATCGGCCAGCAATCTGCTCGACGCCCTGAACCATGCCGG
TATTCCGGTCCCTTATAGCTGTCGTGCCGGCAGTTGCCATGCGTGCCTGGTGCGCGTCGTAAAGGGCGAGCCTGAAGACG
CGTTGCCCGACGCGCTGCCTGCCGAAAAGCGCCAGCAGGGTTGGCGGCTTGCCTGTCAGTGCCGAGTGACGGGGGATCTG
GCTGTCGAGGTGTTTGACCCCCAGCGTGATGGCCTGCCTGCCACAGTGGCAAGCTGCGACTGGCTCTCTGCGTCGGTGCT
GCGTTTGCGTCTGGAGCCTGCGCGGCCTTTGCGCTACAGCGCCGGGCAGCACCAGGTGTTGTGGACTGACAGCGGTGTTG
CGCGGCCTTACTCGCTGGCGAGCCTTCCCGGTGAGGATGCGTTTCTGGAGTTTCACATCGACTGCCTGCAGCCCGGGGCC
TTCCGTGACGTTGCCCGCCAGTTGCAGGTCGGCAACGCCCTGAGGCTCGGCGAGTTGCGTGGCGGGGCGCTGCGTTACGA
CCCGGACTGGCAGGAGAAGCCCTTGTTGCTGCTGGCCGCCGGCACCGGGCTCGGTCCCTTGTGGGGCGTGCTGCGCGAGG
CTCTGCGTCAGGACCATCAAGGCGCGATACGCGTGATTCACCTGGCCCGCGACAGCCAGGAGCACTATCTGGCCGATGGA
CTGCACGCTCTGGCTGAACGTTGCCCCCAGCTGCATGTTCAGCTGGTTACCCCGCAGACGCTACAGGCAACCCTGGCTGA
ACTGCGCCTGTTGTCGCGGCACGCGATGGCGCTGGTGTGCGGCAGTGCCGACAGCGTCGAGATGTTTGCCAAACGGCTGT
ATCTGGCCGGGCTGCCGCGTAATCAGTTGCTGGCTGATGTGTTTGTGGCGCGGGAATAA

Upstream 100 bases:

>100_bases
TGTCAGGTTGGCGATAGCGGGCGCAAAAAGGCGCGGCAGTATAACCCGCCCGACAGGCCAGTCTGTACAATCGCCGTTAT
TTTCTGCACAGGCCGTTTTG

Downstream 100 bases:

>100_bases
GAGGCACGTCAGTTACAGTTCTCGTTCTTCGACACGATAATCACAAAAGGCTGACCCAACGCAAAAGGCCCCGACTCTTG
CGAGACGGGGCCTTGGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MPQLHVGELSWSVTSASNLLDALNHAGIPVPYSCRAGSCHACLVRVVKGEPEDALPDALPAEKRQQGWRLACQCRVTGDL
AVEVFDPQRDGLPATVASCDWLSASVLRLRLEPARPLRYSAGQHQVLWTDSGVARPYSLASLPGEDAFLEFHIDCLQPGA
FRDVARQLQVGNALRLGELRGGALRYDPDWQEKPLLLLAAGTGLGPLWGVLREALRQDHQGAIRVIHLARDSQEHYLADG
LHALAERCPQLHVQLVTPQTLQATLAELRLLSRHAMALVCGSADSVEMFAKRLYLAGLPRNQLLADVFVARE

Sequences:

>Translated_312_residues
MPQLHVGELSWSVTSASNLLDALNHAGIPVPYSCRAGSCHACLVRVVKGEPEDALPDALPAEKRQQGWRLACQCRVTGDL
AVEVFDPQRDGLPATVASCDWLSASVLRLRLEPARPLRYSAGQHQVLWTDSGVARPYSLASLPGEDAFLEFHIDCLQPGA
FRDVARQLQVGNALRLGELRGGALRYDPDWQEKPLLLLAAGTGLGPLWGVLREALRQDHQGAIRVIHLARDSQEHYLADG
LHALAERCPQLHVQLVTPQTLQATLAELRLLSRHAMALVCGSADSVEMFAKRLYLAGLPRNQLLADVFVARE
>Mature_311_residues
PQLHVGELSWSVTSASNLLDALNHAGIPVPYSCRAGSCHACLVRVVKGEPEDALPDALPAEKRQQGWRLACQCRVTGDLA
VEVFDPQRDGLPATVASCDWLSASVLRLRLEPARPLRYSAGQHQVLWTDSGVARPYSLASLPGEDAFLEFHIDCLQPGAF
RDVARQLQVGNALRLGELRGGALRYDPDWQEKPLLLLAAGTGLGPLWGVLREALRQDHQGAIRVIHLARDSQEHYLADGL
HALAERCPQLHVQLVTPQTLQATLAELRLLSRHAMALVCGSADSVEMFAKRLYLAGLPRNQLLADVFVARE

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. Transfers electrons from ferredoxin (ndoA) to NADH [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367314, Length=170, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 34153; Mature: 34021

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLHVGELSWSVTSASNLLDALNHAGIPVPYSCRAGSCHACLVRVVKGEPEDALPDALP
CCCCEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
AEKRQQGWRLACQCRVTGDLAVEVFDPQRDGLPATVASCDWLSASVLRLRLEPARPLRYS
CHHHHCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHCCHHHHHHHHEECCCCCCCEEC
AGQHQVLWTDSGVARPYSLASLPGEDAFLEFHIDCLQPGAFRDVARQLQVGNALRLGELR
CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCC
GGALRYDPDWQEKPLLLLAAGTGLGPLWGVLREALRQDHQGAIRVIHLARDSQEHYLADG
CCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHH
LHALAERCPQLHVQLVTPQTLQATLAELRLLSRHAMALVCGSADSVEMFAKRLYLAGLPR
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCH
NQLLADVFVARE
HHHHHHHHHCCC
>Mature Secondary Structure 
PQLHVGELSWSVTSASNLLDALNHAGIPVPYSCRAGSCHACLVRVVKGEPEDALPDALP
CCCEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
AEKRQQGWRLACQCRVTGDLAVEVFDPQRDGLPATVASCDWLSASVLRLRLEPARPLRYS
CHHHHCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHCCHHHHHHHHEECCCCCCCEEC
AGQHQVLWTDSGVARPYSLASLPGEDAFLEFHIDCLQPGAFRDVARQLQVGNALRLGELR
CCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCC
GGALRYDPDWQEKPLLLLAAGTGLGPLWGVLREALRQDHQGAIRVIHLARDSQEHYLADG
CCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHH
LHALAERCPQLHVQLVTPQTLQATLAELRLLSRHAMALVCGSADSVEMFAKRLYLAGLPR
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCH
NQLLADVFVARE
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8486285; 8787402; 2294092 [H]