| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ygcG [H]
Identifier: 66047219
GI number: 66047219
Start: 4750621
End: 4751334
Strand: Reverse
Name: ygcG [H]
Synonym: Psyr_3992
Alternate gene names: 66047219
Gene position: 4751334-4750621 (Counterclockwise)
Preceding gene: 66047227
Following gene: 66047218
Centisome position: 77.97
GC content: 61.48
Gene sequence:
>714_bases TTGAAGTCTGTTTCACAGTGGATGCTGTACATGGTGATGCTGTTGGGAGGGGTATTGCGGGCCGAGGCAGAGCCATCAGC ACTGGTTTTTCCGCCGATGACCGGCAGTGTGGTGGATGCCGCACAGATGCTCGACAGCCAGACTACGGTTCGTCTGGCCA GACTTCTGAGCGCCCATGAAAAGGCGACCGGGGAGCGGGTAGTGGTGGTGACCCTCGCTGATCTGCAGGGCACGAGCATC GAAGAGTTCGGCTCTCGACTCGGCGACGCCTGGGGCCTGGGGCTGCATGGCAAGGATGACAGTGTTCTGCTGGTGGTCTA TCGCGACAAGCGCAAGGTGTTCATGGAGGTCGGCGGTGCGCTGAAGGACCGTCTCAACGACGCCCAGGCGTCTCTGATCA TCGACATGCTGATGACCCCCGAGTTTGACGACAACCGGTTTGCCGTCGGCATAGAGCGCGGTACGCGCGCGGTCATCGCG GCATTGGGTGGGCAGATACCCGATTATCCCGAGCCGACAGGGCAGATGTCCGACTATGACGAGCAGCCCGATGACGACCA GGTCTGGCTGATCGGTATCATGTTGACCCTCATCGTGCTGGGGATTGTAATCATGAGTGTCAGACGGGGCGGCGCCACCC GGCCCGCACGTGAAAGAGTCGCCGATCGCAGTGGCGGACGCTTCGGCGGTGGCGGTGCTTCAGGCAACTGGTAG
Upstream 100 bases:
>100_bases GAACGCACCAGGTGTTGGCGGTGGATTATGCCGGGGAACTTGTGTTTTGGCTAAGGCGTGTCGTTTCAATGGATTCAAAA AAACACCGGAGGTCTGGATT
Downstream 100 bases:
>100_bases TTGATTGATTCGGAATGAGGGAACCATGGCTTTACTGAACAAAGACGAACAGCGGCAGGTTGCCGAAGCGATTGACCGCG TCGAGCAGCGCACTGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKSVSQWMLYMVMLLGGVLRAEAEPSALVFPPMTGSVVDAAQMLDSQTTVRLARLLSAHEKATGERVVVVTLADLQGTSI EEFGSRLGDAWGLGLHGKDDSVLLVVYRDKRKVFMEVGGALKDRLNDAQASLIIDMLMTPEFDDNRFAVGIERGTRAVIA ALGGQIPDYPEPTGQMSDYDEQPDDDQVWLIGIMLTLIVLGIVIMSVRRGGATRPARERVADRSGGRFGGGGASGNW
Sequences:
>Translated_237_residues MKSVSQWMLYMVMLLGGVLRAEAEPSALVFPPMTGSVVDAAQMLDSQTTVRLARLLSAHEKATGERVVVVTLADLQGTSI EEFGSRLGDAWGLGLHGKDDSVLLVVYRDKRKVFMEVGGALKDRLNDAQASLIIDMLMTPEFDDNRFAVGIERGTRAVIA ALGGQIPDYPEPTGQMSDYDEQPDDDQVWLIGIMLTLIVLGIVIMSVRRGGATRPARERVADRSGGRFGGGGASGNW >Mature_237_residues MKSVSQWMLYMVMLLGGVLRAEAEPSALVFPPMTGSVVDAAQMLDSQTTVRLARLLSAHEKATGERVVVVTLADLQGTSI EEFGSRLGDAWGLGLHGKDDSVLLVVYRDKRKVFMEVGGALKDRLNDAQASLIIDMLMTPEFDDNRFAVGIERGTRAVIA ALGGQIPDYPEPTGQMSDYDEQPDDDQVWLIGIMLTLIVLGIVIMSVRRGGATRPARERVADRSGGRFGGGGASGNW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=164, Percent_Identity=28.6585365853659, Blast_Score=70, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 25609; Mature: 25609
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVSQWMLYMVMLLGGVLRAEAEPSALVFPPMTGSVVDAAQMLDSQTTVRLARLLSAHE CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHH KATGERVVVVTLADLQGTSIEEFGSRLGDAWGLGLHGKDDSVLLVVYRDKRKVFMEVGGA HCCCCEEEEEEEECCCCCCHHHHHHHHCHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHH LKDRLNDAQASLIIDMLMTPEFDDNRFAVGIERGTRAVIAALGGQIPDYPEPTGQMSDYD HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC EQPDDDQVWLIGIMLTLIVLGIVIMSVRRGGATRPARERVADRSGGRFGGGGASGNW CCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKSVSQWMLYMVMLLGGVLRAEAEPSALVFPPMTGSVVDAAQMLDSQTTVRLARLLSAHE CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHH KATGERVVVVTLADLQGTSIEEFGSRLGDAWGLGLHGKDDSVLLVVYRDKRKVFMEVGGA HCCCCEEEEEEEECCCCCCHHHHHHHHCHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHH LKDRLNDAQASLIIDMLMTPEFDDNRFAVGIERGTRAVIAALGGQIPDYPEPTGQMSDYD HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC EQPDDDQVWLIGIMLTLIVLGIVIMSVRRGGATRPARERVADRSGGRFGGGGASGNW CCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]