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The map label for this gene is yqjH [H]

Identifier: 66047154

GI number: 66047154

Start: 4671508

End: 4672275

Strand: Direct

Name: yqjH [H]

Synonym: Psyr_3927

Alternate gene names: 66047154

Gene position: 4671508-4672275 (Clockwise)

Preceding gene: 66047153

Following gene: 66047157

Centisome position: 76.66

GC content: 62.37

Gene sequence:

>768_bases
ATGAATTCACAGCAGTCAATCCATCGTGTCATGCATGAAATCAAGCGACGCAAGCTGCAGGTGGTGCGGGTCACGGAGCT
GACACCCCTGATGCGCCGCATTACCTTGCAGGGGCCGGAGCTGGCGGGTTTCATCAGCCTGGGCACGGATGACCACGTCA
AACTGTTCTTCCCGCAGACGGCAGAAGAACAGGCCGCGCTGGAAAACCTCAACCCTGCCGCCGACAAGGACACGCCGCGC
CCGCCGATGCGCGATTACACGCCGCGTCGCTACGACGAAAAAACCGGGGAACTGGATATCGATTTCGTGCTGCATGGCGA
AGGCCCGGCGACCACTTGGGCCGCTCAGGCAGCGCCCGGGCAATTCCTGCACATCGCCGGGCCAAAGGGTTCGATGGTGG
TGCCGGACATGTTCGACAGCTACCTGCTGATCGGCGACGAAACAGCCATTCCCGCCATCGCCCGACGCCTCGAAGCGCTG
CCCGCCAACCGCGCTGCGCTGGTGGTGGTCGAAGTGGCCAACCCGCAGGAACAGCAGGTGTTCGACAGCGCTGCGCAGGT
CGACGTGATCTGGATTGTACGCGGCGAACAGAATCTGCTGGACGTCACGCGGCGCCTGGAGATGCCCGAGGGCAAGCTGT
ACGCCTGGGTCGCGACCGAATCCGCGCTGTCACGCAAGCTACGTCGTGTACTGCTCGACGAGTTCGGCCTGGAAGAGGAA
TTCGTCAAGGCTGCCGGTTACTGGAAGCTGGACAGCACAGAAGAATGA

Upstream 100 bases:

>100_bases
GCCGCTGGAGCCCGGAAGAGATTCTGCGGGTCAGCGAACTGCTCAACAGCACGGCCAGGGCGGTCGTCGATGGGCCCCAA
CCTGCCTCGGAGGAGTCGGC

Downstream 100 bases:

>100_bases
GCAGGACCGGGCGACTCACAGCGTGCGACGAGACGCCCGTTTATCGACGCCCAGCAACAACAATGCGATGAGCACGAAAC
CGAGCAGCACACCCAGCGCG

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNSQQSIHRVMHEIKRRKLQVVRVTELTPLMRRITLQGPELAGFISLGTDDHVKLFFPQTAEEQAALENLNPAADKDTPR
PPMRDYTPRRYDEKTGELDIDFVLHGEGPATTWAAQAAPGQFLHIAGPKGSMVVPDMFDSYLLIGDETAIPAIARRLEAL
PANRAALVVVEVANPQEQQVFDSAAQVDVIWIVRGEQNLLDVTRRLEMPEGKLYAWVATESALSRKLRRVLLDEFGLEEE
FVKAAGYWKLDSTEE

Sequences:

>Translated_255_residues
MNSQQSIHRVMHEIKRRKLQVVRVTELTPLMRRITLQGPELAGFISLGTDDHVKLFFPQTAEEQAALENLNPAADKDTPR
PPMRDYTPRRYDEKTGELDIDFVLHGEGPATTWAAQAAPGQFLHIAGPKGSMVVPDMFDSYLLIGDETAIPAIARRLEAL
PANRAALVVVEVANPQEQQVFDSAAQVDVIWIVRGEQNLLDVTRRLEMPEGKLYAWVATESALSRKLRRVLLDEFGLEEE
FVKAAGYWKLDSTEE
>Mature_255_residues
MNSQQSIHRVMHEIKRRKLQVVRVTELTPLMRRITLQGPELAGFISLGTDDHVKLFFPQTAEEQAALENLNPAADKDTPR
PPMRDYTPRRYDEKTGELDIDFVLHGEGPATTWAAQAAPGQFLHIAGPKGSMVVPDMFDSYLLIGDETAIPAIARRLEAL
PANRAALVVVEVANPQEQQVFDSAAQVDVIWIVRGEQNLLDVTRRLEMPEGKLYAWVATESALSRKLRRVLLDEFGLEEE
FVKAAGYWKLDSTEE

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=258, Percent_Identity=35.2713178294574, Blast_Score=144, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 28672; Mature: 28672

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSQQSIHRVMHEIKRRKLQVVRVTELTPLMRRITLQGPELAGFISLGTDDHVKLFFPQT
CCCHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCC
AEEQAALENLNPAADKDTPRPPMRDYTPRRYDEKTGELDIDFVLHGEGPATTWAAQAAPG
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCC
QFLHIAGPKGSMVVPDMFDSYLLIGDETAIPAIARRLEALPANRAALVVVEVANPQEQQV
CEEEEECCCCCEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
FDSAAQVDVIWIVRGEQNLLDVTRRLEMPEGKLYAWVATESALSRKLRRVLLDEFGLEEE
HHHCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHH
FVKAAGYWKLDSTEE
HHHHCCCEECCCCCC
>Mature Secondary Structure
MNSQQSIHRVMHEIKRRKLQVVRVTELTPLMRRITLQGPELAGFISLGTDDHVKLFFPQT
CCCHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCC
AEEQAALENLNPAADKDTPRPPMRDYTPRRYDEKTGELDIDFVLHGEGPATTWAAQAAPG
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCCCCC
QFLHIAGPKGSMVVPDMFDSYLLIGDETAIPAIARRLEALPANRAALVVVEVANPQEQQV
CEEEEECCCCCEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
FDSAAQVDVIWIVRGEQNLLDVTRRLEMPEGKLYAWVATESALSRKLRRVLLDEFGLEEE
HHHCCCEEEEEEEECCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHH
FVKAAGYWKLDSTEE
HHHHCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]