Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66047055

Identifier: 66047055

GI number: 66047055

Start: 4557364

End: 4558491

Strand: Reverse

Name: 66047055

Synonym: Psyr_3828

Alternate gene names: NA

Gene position: 4558491-4557364 (Counterclockwise)

Preceding gene: 66047056

Following gene: 66047051

Centisome position: 74.81

GC content: 61.52

Gene sequence:

>1128_bases
ATGCCTGTTCACGTAATCGACAGCCTCGCCACCGTTGCGCCTGCCCAGTGGGATGCGCTGGTACCTGGCAATCAGCCATT
CCTGCGGCATGCGTTTCTCAGCTCGCTGGAGGACAGCGGCAGTCTCGGGCCACGATCGGGCTGGCGTGCCGAACATGTGC
TGCACTACGAAAACGATCAGTTGGTGGCGGCATTGCCAGCCTACCGAAAGTGGCATTCGTATGGCGAGTACGTGTTCGAT
CACGCCTGGGCAGACGCCTGCCGTCGCGCCGGCATCGCCTATTACCCCAAGCTGCTGATCGCCGTGCCGTTCAGCCCGGT
CGGCGGTTCGCGGATTCTGTCCGCGACGCCTCAGGGTGGCATCGAGTTGCTCGGCGAGCTGCCGGCATACCTGCAACGTG
AGGGGCTGTCGAGCGCACACGTGAACTTTACCGATCCGGCGGCCGATGCCTTGCTTGAAACCCAGCCGGGCTGGTTGCAG
CGCATCGGTTGCCAGTTTCACTGGCATAACCGGGGTTACCGGGACTTTCAGGACTTTCTTGACGCATTGAGTTCACGCAA
GCGCAAACAGATGCGCAAGGAACGTGAACAAGTGGCGGGGCAGGGCATCGAGTTTGAATGGCTCGAGGGCGCGCAGATGA
GCGAAGTGCTGTGGGACTTCGTTTATGCGTGCTACTCCAATACCTACGAGGTGCGTGGGCAGGCGCCTTACCTGACGCGT
GAGTTCTTCAGCCTGTTGGCCGAGCGCATGCCCGAATCGATCCGTGTGGTCATCGCGCTGCAGGGCTCACGGCCTGTGGC
GATGGCCTTCAGCCTGATTGGCGATGACAGTTTCTATGGGCGCTACTGGGGCTGCCTGGCCGAGTTTGACCGGCTGCATT
TCGAAACCTGTTTCTATCAAGGTATGGACTATGCCATCGCCCACGGCCTGCAACGATTCGACGCCGGCGCGCAGGGCGAA
CACAAACTGATCCGCGGCTTCGAACCGCAGATCACCCGTTCGTGGCACTACCTGATGCACCCAGGCCTGAAAGACGCGGT
CAGCGAGTTTCTGGAGCAGGAGCGAGTCGGCGTACTGGCCTATGCCGAGGAAGCGCGCAGCGCGCTGCCGTATCGGCAGG
CGGAGTAA

Upstream 100 bases:

>100_bases
TGATTTCGCGATCACTCTTTCCAGGCAGATTGCCGAGGCGGTGAACATGACGCCTCAATAAGGGATATTCTTCACCCTGT
CAGCCTATCGGGGAACCTGC

Downstream 100 bases:

>100_bases
CCGGCCAGAAGACATTCAGCGACTGCACGGGCCTCTTCGCGAGCAAGCTCGCTCCCACAAGTGCGGTGTACACCTGACCG
ACAGGTGAGTAGCTACCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MPVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQLVAALPAYRKWHSYGEYVFD
HAWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGGIELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQ
RIGCQFHWHNRGYRDFQDFLDALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTR
EFFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIAHGLQRFDAGAQGE
HKLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLAYAEEARSALPYRQAE

Sequences:

>Translated_375_residues
MPVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQLVAALPAYRKWHSYGEYVFD
HAWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGGIELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQ
RIGCQFHWHNRGYRDFQDFLDALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTR
EFFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIAHGLQRFDAGAQGE
HKLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLAYAEEARSALPYRQAE
>Mature_374_residues
PVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQLVAALPAYRKWHSYGEYVFDH
AWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGGIELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQR
IGCQFHWHNRGYRDFQDFLDALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTRE
FFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIAHGLQRFDAGAQGEH
KLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLAYAEEARSALPYRQAE

Specific function: Unknown

COG id: COG3146

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42620; Mature: 42489

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQ
CCCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
LVAALPAYRKWHSYGEYVFDHAWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGG
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCEEECCCCHH
IELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQRIGCQFHWHNRGYRDFQDFL
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHH
DALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTR
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHH
EFFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQ
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GMDYAIAHGLQRFDAGAQGEHKLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLA
CCHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHCHHHHHCCCHHHHHHHHHHHHCCCHHE
YAEEARSALPYRQAE
EHHHHHHCCCCCCCC
>Mature Secondary Structure 
PVHVIDSLATVAPAQWDALVPGNQPFLRHAFLSSLEDSGSLGPRSGWRAEHVLHYENDQ
CCHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC
LVAALPAYRKWHSYGEYVFDHAWADACRRAGIAYYPKLLIAVPFSPVGGSRILSATPQGG
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEEECCCCCCCCCEEECCCCHH
IELLGELPAYLQREGLSSAHVNFTDPAADALLETQPGWLQRIGCQFHWHNRGYRDFQDFL
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHH
DALSSRKRKQMRKEREQVAGQGIEFEWLEGAQMSEVLWDFVYACYSNTYEVRGQAPYLTR
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHH
EFFSLLAERMPESIRVVIALQGSRPVAMAFSLIGDDSFYGRYWGCLAEFDRLHFETCFYQ
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GMDYAIAHGLQRFDAGAQGEHKLIRGFEPQITRSWHYLMHPGLKDAVSEFLEQERVGVLA
CCHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHCHHHHHCCCHHHHHHHHHHHHCCCHHE
YAEEARSALPYRQAE
EHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA