Click here to switch to the map view.

The map label for this gene is yigM [C]

Identifier: 66047049

GI number: 66047049

Start: 4546637

End: 4547515

Strand: Reverse

Name: yigM [C]

Synonym: Psyr_3822

Alternate gene names: 66047049

Gene position: 4547515-4546637 (Counterclockwise)

Preceding gene: 66047051

Following gene: 66047046

Centisome position: 74.63

GC content: 61.89

Gene sequence:

>879_bases
ATGGGTTATCTACTTTTCGTCACACTGATTCAGGCGTTTTCGTTCAGCCTGATCGGTGTCTATCTGGCCGGGCACGTCGA
CAGCTATTTCGCGGTGCTGGTCCGCGTGGTGCTGGCCGGTCTGGTGTTCATTCCGCTGACCCGCTGGCGTCAGGTCGAAC
CCCGCTTCATGCGCAGCATGCTGCTGATCGGCGCGCTGCAATTCGGCGTGACCTATGTCTGCCTGTACCTGAGCTTCAGG
GTGCTGACGGTGCCGGAAGTGCTGCTGTTCACCATCCTCACGCCGCTGCACGTGACGTTGATCGAAGATGCGCTGAACCG
ACGCTTCAACCCTTGGGCATTGCTGGCGGCAGTGGTCGCGGTGCTGGGCGCTGGCGTGATTCGTTACGATGGCCTGGACG
GCGACTTCCTTGGCGGTTTCCTGCTGCTGCAACTGGCCAACTTCACCTACGCCGCCGGGCAGGTGCTGTACAAGCATCTG
GTGGCGCGCTACCCGAGCGATCTGCCGCATTACCGACGTTTCGGCTACTTCTACCTCGGCGCACTGGCGGTGGTTCTGCC
CGCGTTCCTGATGTTCGGCAACCCGCAACACCTGCCCGAGGCGCCGACCCAATGGATCGTGCTGCTATTTCTCGGCCTGT
GTTCGACGGCGCTGGGCATGTACTGGTGGAATAAAGGCGCGTGCATGGTCAACGGCGGCACACTGGCGGTGATGAATAAC
CTGCATGTGCCGCTGGGGCTGTTGATCAATCTGCTGATCTGGAACCAGCATGAGGACTTCACCCGCCTGCTGATCGGCGG
CGGGGTGATCGTGGCGTCGGTGTGGATCAGTCGCCTGGGCGTGCGCCGCGTGCCGGAGAGCGTTTCCGGCACACGTTGA

Upstream 100 bases:

>100_bases
GGGGCGCGGCGACGGCTTGGCGTCAAAAAGCGGCGGCCGTCGAGTGGACAGTGAGTGACGCAACCGCTATGGTCGCGCCC
TTAAAAAATGGGGGGCGGGC

Downstream 100 bases:

>100_bases
GTCAGACGTGCTGGCCGCCGTTGACGTGAATCTCCGCACCGTTCACGTAGGACGCGCCAGCCGTACACAGGAAGTAGATC
AGCGAGGCGACTTCCTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MGYLLFVTLIQAFSFSLIGVYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRQVEPRFMRSMLLIGALQFGVTYVCLYLSFR
VLTVPEVLLFTILTPLHVTLIEDALNRRFNPWALLAAVVAVLGAGVIRYDGLDGDFLGGFLLLQLANFTYAAGQVLYKHL
VARYPSDLPHYRRFGYFYLGALAVVLPAFLMFGNPQHLPEAPTQWIVLLFLGLCSTALGMYWWNKGACMVNGGTLAVMNN
LHVPLGLLINLLIWNQHEDFTRLLIGGGVIVASVWISRLGVRRVPESVSGTR

Sequences:

>Translated_292_residues
MGYLLFVTLIQAFSFSLIGVYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRQVEPRFMRSMLLIGALQFGVTYVCLYLSFR
VLTVPEVLLFTILTPLHVTLIEDALNRRFNPWALLAAVVAVLGAGVIRYDGLDGDFLGGFLLLQLANFTYAAGQVLYKHL
VARYPSDLPHYRRFGYFYLGALAVVLPAFLMFGNPQHLPEAPTQWIVLLFLGLCSTALGMYWWNKGACMVNGGTLAVMNN
LHVPLGLLINLLIWNQHEDFTRLLIGGGVIVASVWISRLGVRRVPESVSGTR
>Mature_291_residues
GYLLFVTLIQAFSFSLIGVYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRQVEPRFMRSMLLIGALQFGVTYVCLYLSFRV
LTVPEVLLFTILTPLHVTLIEDALNRRFNPWALLAAVVAVLGAGVIRYDGLDGDFLGGFLLLQLANFTYAAGQVLYKHLV
ARYPSDLPHYRRFGYFYLGALAVVLPAFLMFGNPQHLPEAPTQWIVLLFLGLCSTALGMYWWNKGACMVNGGTLAVMNNL
HVPLGLLINLLIWNQHEDFTRLLIGGGVIVASVWISRLGVRRVPESVSGTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790261, Length=293, Percent_Identity=45.7337883959044, Blast_Score=251, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32535; Mature: 32404

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GYLLFVTLIQAFSFSLIGVYLAGHVDSYFAVLVRVVLAGLVFIPLTRWRQVEPRFMRSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLIGALQFGVTYVCLYLSFRVLTVPEVLLFTILTPLHVTLIEDALNRRFNPWALLAAVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLGAGVIRYDGLDGDFLGGFLLLQLANFTYAAGQVLYKHLVARYPSDLPHYRRFGYFYLG
HHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALAVVLPAFLMFGNPQHLPEAPTQWIVLLFLGLCSTALGMYWWNKGACMVNGGTLAVMNN
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEECC
LHVPLGLLINLLIWNQHEDFTRLLIGGGVIVASVWISRLGVRRVPESVSGTR
CCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]