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The map label for this gene is 66047040

Identifier: 66047040

GI number: 66047040

Start: 4533648

End: 4534502

Strand: Direct

Name: 66047040

Synonym: Psyr_3813

Alternate gene names: NA

Gene position: 4533648-4534502 (Clockwise)

Preceding gene: 66047037

Following gene: 66047041

Centisome position: 74.4

GC content: 48.89

Gene sequence:

>855_bases
ATGGGACTATGTATTTCAAAACATTCTGGCAGCAGCTACAGCTACAGTGATAGCGACCGCTGGGAAGTGCCTGTAAACCC
TTCAAACGTCAGGTCTGCATCCAGTCATCAAACGGTATCTGCGAGCGATAGAGCCTCAGACAAGGTGGACGAACGTCCTG
CAACATTTTCTCATTTTCAACTCGCGCGGTGCGGCGAAGATTATACTCTTAGCATGGTTTCTTTAGCAGCTTATCAAGCA
GAAAGACGGCATCGCGGTAATTTAATAAAGGATCGTAGTCAATCCGCACTTCCCTGGGTGCAGGTATATCACTCTGAAAC
AGGCCTGGACTACAGTTTCCAGATTGACAGAACCACGACTGTCAAAGTGGCCGGATTCAACTACAATGTCCCCAATGATG
GAGAGACTCGGCATTTATACAGTGCCGGCACGAGCCAGGTAAATATGCCTGTCATCACAGACAACATGAGTGCGTGCATT
GCTGTCGCGTGTGCGGCGGAAAACGTAGATGCCGGCACGGGTGAACGTAGGCCGGGGGCGAAAGTTCGCGTATTCCATCT
ACTCCCTTTTCGTCGCGAAGACCTTATGCCAGAACAAGTTTTAGCCTCTGTGCGCGATTATCTGCGGGATATTAAGGAAC
AGGGGCTAACAATGCGCGTAGCCCTGCATGGAGGAAATAGAGAGGGTGATTTCTCAGTCAGCACTGCGGAGGCATTGAAA
AGCCTGTTTGCTGATGAAGGAATCCCGATTGAATTCGACGAAACTTGTGCAAACCGAACATCTGAAACACTGCTTGGCGC
CGTTATTCTTAATGACAACTCGACTCAATTCATAAAGCATTTGGTCGCTTTATGA

Upstream 100 bases:

>100_bases
CTATAAATTAGCCATGTGGGGCGTGGCAACGACCATACTAATTTTTCGGTTATGTCGCTGCGCGCCTATCGCTTAATCCT
ACATCGAAGAGAGAACCGTC

Downstream 100 bases:

>100_bases
CACGATGCTGCGGCTGTCGGCAGCGCTTCGATTTTGCCTGAACAGTTCGCAGACGAACCGGTTTTTTTTTGGGGGGGTGG
AGCCCGACGTCGCAAGCAAT

Product: type III effector HopAF1

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MGLCISKHSGSSYSYSDSDRWEVPVNPSNVRSASSHQTVSASDRASDKVDERPATFSHFQLARCGEDYTLSMVSLAAYQA
ERRHRGNLIKDRSQSALPWVQVYHSETGLDYSFQIDRTTTVKVAGFNYNVPNDGETRHLYSAGTSQVNMPVITDNMSACI
AVACAAENVDAGTGERRPGAKVRVFHLLPFRREDLMPEQVLASVRDYLRDIKEQGLTMRVALHGGNREGDFSVSTAEALK
SLFADEGIPIEFDETCANRTSETLLGAVILNDNSTQFIKHLVAL

Sequences:

>Translated_284_residues
MGLCISKHSGSSYSYSDSDRWEVPVNPSNVRSASSHQTVSASDRASDKVDERPATFSHFQLARCGEDYTLSMVSLAAYQA
ERRHRGNLIKDRSQSALPWVQVYHSETGLDYSFQIDRTTTVKVAGFNYNVPNDGETRHLYSAGTSQVNMPVITDNMSACI
AVACAAENVDAGTGERRPGAKVRVFHLLPFRREDLMPEQVLASVRDYLRDIKEQGLTMRVALHGGNREGDFSVSTAEALK
SLFADEGIPIEFDETCANRTSETLLGAVILNDNSTQFIKHLVAL
>Mature_283_residues
GLCISKHSGSSYSYSDSDRWEVPVNPSNVRSASSHQTVSASDRASDKVDERPATFSHFQLARCGEDYTLSMVSLAAYQAE
RRHRGNLIKDRSQSALPWVQVYHSETGLDYSFQIDRTTTVKVAGFNYNVPNDGETRHLYSAGTSQVNMPVITDNMSACIA
VACAAENVDAGTGERRPGAKVRVFHLLPFRREDLMPEQVLASVRDYLRDIKEQGLTMRVALHGGNREGDFSVSTAEALKS
LFADEGIPIEFDETCANRTSETLLGAVILNDNSTQFIKHLVAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31341; Mature: 31210

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLCISKHSGSSYSYSDSDRWEVPVNPSNVRSASSHQTVSASDRASDKVDERPATFSHFQ
CCEEEECCCCCCCCCCCCCCEEECCCHHHCCCCCCCCEECCCCCCCCHHHCCCCCHHHHH
LARCGEDYTLSMVSLAAYQAERRHRGNLIKDRSQSALPWVQVYHSETGLDYSFQIDRTTT
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCEEE
VKVAGFNYNVPNDGETRHLYSAGTSQVNMPVITDNMSACIAVACAAENVDAGTGERRPGA
EEEEEEECCCCCCCCCEEEEECCCCCCCCEEEECCHHHHEEEEECCCCCCCCCCCCCCCC
KVRVFHLLPFRREDLMPEQVLASVRDYLRDIKEQGLTMRVALHGGNREGDFSVSTAEALK
EEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHH
SLFADEGIPIEFDETCANRTSETLLGAVILNDNSTQFIKHLVAL
HHHCCCCCCEEECHHHHCCCHHHEEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
GLCISKHSGSSYSYSDSDRWEVPVNPSNVRSASSHQTVSASDRASDKVDERPATFSHFQ
CEEEECCCCCCCCCCCCCCEEECCCHHHCCCCCCCCEECCCCCCCCHHHCCCCCHHHHH
LARCGEDYTLSMVSLAAYQAERRHRGNLIKDRSQSALPWVQVYHSETGLDYSFQIDRTTT
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCEEE
VKVAGFNYNVPNDGETRHLYSAGTSQVNMPVITDNMSACIAVACAAENVDAGTGERRPGA
EEEEEEECCCCCCCCCEEEEECCCCCCCCEEEECCHHHHEEEEECCCCCCCCCCCCCCCC
KVRVFHLLPFRREDLMPEQVLASVRDYLRDIKEQGLTMRVALHGGNREGDFSVSTAEALK
EEEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHH
SLFADEGIPIEFDETCANRTSETLLGAVILNDNSTQFIKHLVAL
HHHCCCCCCEEECHHHHCCCHHHEEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA