| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047005
Identifier: 66047005
GI number: 66047005
Start: 4495804
End: 4496304
Strand: Reverse
Name: 66047005
Synonym: Psyr_3777
Alternate gene names: NA
Gene position: 4496304-4495804 (Counterclockwise)
Preceding gene: 66047006
Following gene: 66047004
Centisome position: 73.79
GC content: 60.48
Gene sequence:
>501_bases ATGACTGATCATGTTCGGGGCTCGCGCGGCACGTGGCATACCTGCCTGGCATTGCTGGCCTGTCTGTGCCTGGAGGCGAT GCATCCGGCCTGTGCCGAAGAGGCCGACGACATGGCGCTGGCGCTGGTGGAGCAACGAAATCTGGGCGAGGGCCTTGCCT GGCTGGGGTATCAGGTCGCCTCGCGCACGGCGACGTTTGCCGGTATCGTGCAGGCAGTCGGCAAGACTGAAGCGCAGGAA CTGGTACAGAAGGAATTACAGCGCCTCAAACCGGAATATCAGGCGCAGTGGGACCGCAATCTGGCAGCCGCTTATGCTCA TTCATTTACCGCCGAGGAATTGCGTTCGCTCAATCAGGGCGGGGATTCGCCTTCATTGGGGAACAGCTTCAGGGCCAGAA ACACCCAGGTCAGCGTCGATATGAAAGCCCGATCATCGGAGCTGCTGGGACAATTTGTCAGTCGTGCGCTGAGCAATGCC GAGGCAGCACTGCGACGCTGA
Upstream 100 bases:
>100_bases AGCTGATAACGGCATCAATGAACGGTATGCGACGCGCCGAGTGGTAAAGCCCCGCCGAGCTGATAAGTTCAGGTCTGGGT CAATCGATGCGGGAGGCGTC
Downstream 100 bases:
>100_bases CAGCTATTTTGACGAGACGAGGCAAAAAAACATGGACGCATTCATGCAGGCAGCATTCGATGAGGCGCAACTCGGGCTGA AGGAAGGCGGAATCCCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTDHVRGSRGTWHTCLALLACLCLEAMHPACAEEADDMALALVEQRNLGEGLAWLGYQVASRTATFAGIVQAVGKTEAQE LVQKELQRLKPEYQAQWDRNLAAAYAHSFTAEELRSLNQGGDSPSLGNSFRARNTQVSVDMKARSSELLGQFVSRALSNA EAALRR
Sequences:
>Translated_166_residues MTDHVRGSRGTWHTCLALLACLCLEAMHPACAEEADDMALALVEQRNLGEGLAWLGYQVASRTATFAGIVQAVGKTEAQE LVQKELQRLKPEYQAQWDRNLAAAYAHSFTAEELRSLNQGGDSPSLGNSFRARNTQVSVDMKARSSELLGQFVSRALSNA EAALRR >Mature_165_residues TDHVRGSRGTWHTCLALLACLCLEAMHPACAEEADDMALALVEQRNLGEGLAWLGYQVASRTATFAGIVQAVGKTEAQEL VQKELQRLKPEYQAQWDRNLAAAYAHSFTAEELRSLNQGGDSPSLGNSFRARNTQVSVDMKARSSELLGQFVSRALSNAE AALRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18150; Mature: 18018
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHVRGSRGTWHTCLALLACLCLEAMHPACAEEADDMALALVEQRNLGEGLAWLGYQVA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SRTATFAGIVQAVGKTEAQELVQKELQRLKPEYQAQWDRNLAAAYAHSFTAEELRSLNQG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC GDSPSLGNSFRARNTQVSVDMKARSSELLGQFVSRALSNAEAALRR CCCCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDHVRGSRGTWHTCLALLACLCLEAMHPACAEEADDMALALVEQRNLGEGLAWLGYQVA CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH SRTATFAGIVQAVGKTEAQELVQKELQRLKPEYQAQWDRNLAAAYAHSFTAEELRSLNQG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC GDSPSLGNSFRARNTQVSVDMKARSSELLGQFVSRALSNAEAALRR CCCCCCCCCHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA