| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046994
Identifier: 66046994
GI number: 66046994
Start: 4483919
End: 4484650
Strand: Reverse
Name: 66046994
Synonym: Psyr_3766
Alternate gene names: NA
Gene position: 4484650-4483919 (Counterclockwise)
Preceding gene: 66046995
Following gene: 66046993
Centisome position: 73.59
GC content: 57.79
Gene sequence:
>732_bases ATGACTGTTTGTTTTGTTCGGGGCGAGTCAGGTGCCGACGTGTCGTTGCGGCTGGATCCGCAGCGGCCCGGTTTTAATAT GACAACAAACTTCCATCATCTGGCAACCCGGCAGTCCGCGCTTTCGGTGGCGCAACTGGCCGAGCAACAGGCAAAGCTGT CCGGCCCCGTTGGCCTGTTTGCCAAACTCTGTCGGCAGCTTCGTTCGCATGGGCGTCAGTCACCCTTGCTCGAAGACATT GCCCGGCTTGAGGGCCGCAAGCGTCAATGGCTGGCCGAGCGCGCCGTACAATTCGCACTGGGCCTGCACGGCCGTCGGCC AGAAGTCGAGAACCCGTTCAAAGGCCTGGTGCGCGAAGACCTGTGCTGCATCGTGTTCGATGACCCCTCAACGCACACGC TGGTCGAGCGTTATACCGCCAGCGAAGCGCTGCGGGCTCAGGACAGTGAGTACTTCGTCAAACTCATTGCCACCACGCGC AACACCGTCGAGCGGCGAATCGTCTTCCATGGTCTGCTCGAACACTTCGACCGATTACTGCCCATTGAGAAGAGCATCTA TCCGCTCAACTATCGCGCTGTCCAGCAAGCGCACCTCGATAATGAGGAAGCCCTCTATGGAGCACTGATGATGGAGCAGC CCATCGGTACATTGCTTGAGATGCATACGCCTGAGTGGCTGTTGAATAACCTGTCCTCGTTTGAACTTTCCATTGATCAA GCGTGTGGCTAA
Upstream 100 bases:
>100_bases CTGTGACGCCCATCAGGCACTGCTTCCTGGCTGGCTGCAGAAAGGAATATCCGAAGCCTGCTCGCACGACGAACTGTAAA CAATAAAAAAGGAACCACTC
Downstream 100 bases:
>100_bases GCAGGTGTTGGAAGCGGGTGTTGATCCTCTCGGCTGATAGGGTTTTACAAGCGGTTCAGGTTTTTTCTAACAAAACACGT TCAAGCTCAGTGCGCGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTVCFVRGESGADVSLRLDPQRPGFNMTTNFHHLATRQSALSVAQLAEQQAKLSGPVGLFAKLCRQLRSHGRQSPLLEDI ARLEGRKRQWLAERAVQFALGLHGRRPEVENPFKGLVREDLCCIVFDDPSTHTLVERYTASEALRAQDSEYFVKLIATTR NTVERRIVFHGLLEHFDRLLPIEKSIYPLNYRAVQQAHLDNEEALYGALMMEQPIGTLLEMHTPEWLLNNLSSFELSIDQ ACG
Sequences:
>Translated_243_residues MTVCFVRGESGADVSLRLDPQRPGFNMTTNFHHLATRQSALSVAQLAEQQAKLSGPVGLFAKLCRQLRSHGRQSPLLEDI ARLEGRKRQWLAERAVQFALGLHGRRPEVENPFKGLVREDLCCIVFDDPSTHTLVERYTASEALRAQDSEYFVKLIATTR NTVERRIVFHGLLEHFDRLLPIEKSIYPLNYRAVQQAHLDNEEALYGALMMEQPIGTLLEMHTPEWLLNNLSSFELSIDQ ACG >Mature_242_residues TVCFVRGESGADVSLRLDPQRPGFNMTTNFHHLATRQSALSVAQLAEQQAKLSGPVGLFAKLCRQLRSHGRQSPLLEDIA RLEGRKRQWLAERAVQFALGLHGRRPEVENPFKGLVREDLCCIVFDDPSTHTLVERYTASEALRAQDSEYFVKLIATTRN TVERRIVFHGLLEHFDRLLPIEKSIYPLNYRAVQQAHLDNEEALYGALMMEQPIGTLLEMHTPEWLLNNLSSFELSIDQA CG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27582; Mature: 27451
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVCFVRGESGADVSLRLDPQRPGFNMTTNFHHLATRQSALSVAQLAEQQAKLSGPVGLF CEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AKLCRQLRSHGRQSPLLEDIARLEGRKRQWLAERAVQFALGLHGRRPEVENPFKGLVRED HHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC LCCIVFDDPSTHTLVERYTASEALRAQDSEYFVKLIATTRNTVERRIVFHGLLEHFDRLL CEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PIEKSIYPLNYRAVQQAHLDNEEALYGALMMEQPIGTLLEMHTPEWLLNNLSSFELSIDQ CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHEECHHC ACG CCC >Mature Secondary Structure TVCFVRGESGADVSLRLDPQRPGFNMTTNFHHLATRQSALSVAQLAEQQAKLSGPVGLF EEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AKLCRQLRSHGRQSPLLEDIARLEGRKRQWLAERAVQFALGLHGRRPEVENPFKGLVRED HHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC LCCIVFDDPSTHTLVERYTASEALRAQDSEYFVKLIATTRNTVERRIVFHGLLEHFDRLL CEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PIEKSIYPLNYRAVQQAHLDNEEALYGALMMEQPIGTLLEMHTPEWLLNNLSSFELSIDQ CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHEECHHC ACG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA