| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66046993
Identifier: 66046993
GI number: 66046993
Start: 4483281
End: 4483715
Strand: Reverse
Name: 66046993
Synonym: Psyr_3765
Alternate gene names: NA
Gene position: 4483715-4483281 (Counterclockwise)
Preceding gene: 66046994
Following gene: 66046992
Centisome position: 73.58
GC content: 51.26
Gene sequence:
>435_bases ATGAAAAAAATAACACCTTTGGTTTTCTTGTTAGTGTCGGCTGCCAGCCAGGCGGCCGACTATTCGGTGACGACTACCAG AACCCCGACGTTTATCAATGGGCCTGCTCACAGTGCGTTTTCCCGACACCAGTTGAGATTGGCTGATTACCCCCGCGGCG CGGCTAACAACTCTCGGTTGCAAAAGATTTCCTGGACCGCGACTACCTTTCCGGAAAGCGTGAACGAACGCGCAAATCTT TGTTTCAGGAGAGGCGGTGTACATGATTCTGATTGTATCTCTATAACGCCAGGCGTGCCTGGCAGTACTGAGAGATTCAA CAGTCTTGGTTTTAGCTATGCCTCCGACGTCATGATCAGGCACAGCGCTGAAAGTGGACCTTGGCAAAGCAAGCCTGCCG GGCCAGAAACAGTCACCTTTCATTTAACGTACTGA
Upstream 100 bases:
>100_bases GTCCGGCGAATGATACGAAATAGCAGCTCGTGCAGACGTTTCAAGCCTGGGGCTTTTGCACGGCCGATGAATTTTATTTA TAAATATTGGAGTAACACCT
Downstream 100 bases:
>100_bases TTGTTAATCCCTGGCGATAACCGTCAGGGATCTTTCGGGGCAGGAGCCAACGTCATGCGAGTCATAAGTTCCGGAGCAGA TGCACTGATAGCCGCGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MKKITPLVFLLVSAASQAADYSVTTTRTPTFINGPAHSAFSRHQLRLADYPRGAANNSRLQKISWTATTFPESVNERANL CFRRGGVHDSDCISITPGVPGSTERFNSLGFSYASDVMIRHSAESGPWQSKPAGPETVTFHLTY
Sequences:
>Translated_144_residues MKKITPLVFLLVSAASQAADYSVTTTRTPTFINGPAHSAFSRHQLRLADYPRGAANNSRLQKISWTATTFPESVNERANL CFRRGGVHDSDCISITPGVPGSTERFNSLGFSYASDVMIRHSAESGPWQSKPAGPETVTFHLTY >Mature_144_residues MKKITPLVFLLVSAASQAADYSVTTTRTPTFINGPAHSAFSRHQLRLADYPRGAANNSRLQKISWTATTFPESVNERANL CFRRGGVHDSDCISITPGVPGSTERFNSLGFSYASDVMIRHSAESGPWQSKPAGPETVTFHLTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15734; Mature: 15734
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITPLVFLLVSAASQAADYSVTTTRTPTFINGPAHSAFSRHQLRLADYPRGAANNSRL CCCHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCE QKISWTATTFPESVNERANLCFRRGGVHDSDCISITPGVPGSTERFNSLGFSYASDVMIR EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHCCCCHHCCEEEE HSAESGPWQSKPAGPETVTFHLTY ECCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKKITPLVFLLVSAASQAADYSVTTTRTPTFINGPAHSAFSRHQLRLADYPRGAANNSRL CCCHHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCE QKISWTATTFPESVNERANLCFRRGGVHDSDCISITPGVPGSTERFNSLGFSYASDVMIR EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHCCCCHHCCEEEE HSAESGPWQSKPAGPETVTFHLTY ECCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA