| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is actP [H]
Identifier: 66046984
GI number: 66046984
Start: 4472506
End: 4474164
Strand: Reverse
Name: actP [H]
Synonym: Psyr_3756
Alternate gene names: 66046984
Gene position: 4474164-4472506 (Counterclockwise)
Preceding gene: 66046985
Following gene: 66046982
Centisome position: 73.42
GC content: 58.71
Gene sequence:
>1659_bases ATGATCCGGCGCCTATCAGCAGCACTTGGCCTGGCCGCCTTCGCGCCGACCCTCTGGGCGGCAGACGCGTTGACGGGTGC AGTGCAGAAACAACCCCTGAACGTCGCCGCGATCGTCATGTTCGTGGTCTTCGTCGCTTTCACGCTGTACATCACCTACT GGGCATCGAAAAAGAACAAGACAGCGTCGGACTATTACTCGGCAGGTGGCAAGATCACCGGCTTCCAGAACGGTCTGGCG ATCGCCGGTGACTACATGTCGGCAGCGTCCTTTCTGGGTATTTCCGCGCTGGTCTACACCTCCGGCTACGATGGCCTGAT CTACTCGATCGGCTTCCTGGTAGGCTGGCCGATCATCCTGTTCCTGATCGCCGAACGCCTGCGCAACCTGGGTAAATACA CCTTTGCCGATGTGGCGTCGTACCGCCTCAAGCAAAAGGAAATTCGCACCCTGTCTGCCTGCGGCTCACTGGTGGTGGTG GCGTTTTACCTGATTGCGCAGATGGTCGGTGCCGGCAAGCTGATCCAGTTGCTGTTCGGTCTGGACTACGCCGTTGCGGT GGTGCTGGTCGGTATCCTGATGTGCCTCTATGTGCTGTTCGGCGGCATGCTCGCTACCACCTGGGTGCAGATCATCAAGG CGGTGATGTTGCTGTCCGGTGCGTCGTTCATGGCATTGATGGTCATGAAGCACGTCAACTTCGACTTCAACATGCTGTTC TCCGAAGCGATCAAGGTTCACCCCAAAGGTGAAGCGATCATGAGCCCTGGCGGGCTGGTGAAAGACCCGATCTCGGCGTT CTCGCTGGGTCTGGCCCTGATGTTCGGTACTGCGGGCCTGCCACACATCCTGATGCGCTTCTTCACCGTGAGCGATGCCA AGGAAGCGCGCAAGTCGGTGCTCTACGCAACCGGCTTTATCGGTTACTTCTACATCCTGACCTTCATCATCGGTTTCGGC GCGATCCTGCTGGTCAGCACCAATCCGGCGTTCAAGGATGCAGCAGGCGCCTTGTTGGGCGGTAACAACATGGCTGCGGT TCACCTGGCCGATGCGGTCGGTGGCAGTCTGTTCCTGGGCTTCATCTCGGCAGTCGCTTTCGCCACCATTCTGGCAGTGG TTGCCGGTCTGACCCTGGCGGGTGCTTCGGCGGTTTCCCACGACTTGTATGCCAGCGTCATCAAGGCAGGCAAAGCCAAC GAGAAGGACGAGATCCGTATCTCGAAAATCACCACCATTGCCCTGGCGGTCGTGGCGATCTTTCTGGGTATTGCCTTTGA AAGCCAGAACATCGCCTTCATGGTGGGCCTGGCGTTCTCGGTCGCGGCAAGCTGCAACTTCCCGATTCTGCTGCTTTCCA TGTACTGGAAAAACCTGACCACCCGTGGCGCCATGATCGGCGGCTGGATGGGCCTGATCAGTGCAGTGGTGCTGATGGTG CTCGGTCCGACCATCTGGGTGCAGATCCTGCACCACGAGAAAGCCATTTTCCCTTACGAATACCCGGCGCTGTTTTCCAT CGCCATCGCCTTCGTAGGTATCTGGTTCTTCTCCATCACCGACAAGTCGAAAGCGGCGGAGGGCGAGCGCGCTCTGTTCT ATCCGCAATTCGTCCGCTCGCAGACGGGGCTGGGTGCCAGTGGTGCGGTTTCGCACTAA
Upstream 100 bases:
>100_bases GGCTGATCCTTTCCGCGTTCATATTGACGGCCATCTATGTTCGCCGTGCCAACGGTGAATTCGATGACCTGAACAACGCG ATCCTCAAGGAGGCTCAGCA
Downstream 100 bases:
>100_bases GGTACCGGTGTTGTGAACGAAGCAGCCTTCGGGCTGCTTTTTCATGAGCGATAAAAAAACCCCGCTTGAAAAAGCGGGGT TTTTTATTGGCTATATGCGC
Product: acetate permease
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MIRRLSAALGLAAFAPTLWAADALTGAVQKQPLNVAAIVMFVVFVAFTLYITYWASKKNKTASDYYSAGGKITGFQNGLA IAGDYMSAASFLGISALVYTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQKEIRTLSACGSLVVV AFYLIAQMVGAGKLIQLLFGLDYAVAVVLVGILMCLYVLFGGMLATTWVQIIKAVMLLSGASFMALMVMKHVNFDFNMLF SEAIKVHPKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFG AILLVSTNPAFKDAAGALLGGNNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKAGKAN EKDEIRISKITTIALAVVAIFLGIAFESQNIAFMVGLAFSVAASCNFPILLLSMYWKNLTTRGAMIGGWMGLISAVVLMV LGPTIWVQILHHEKAIFPYEYPALFSIAIAFVGIWFFSITDKSKAAEGERALFYPQFVRSQTGLGASGAVSH
Sequences:
>Translated_552_residues MIRRLSAALGLAAFAPTLWAADALTGAVQKQPLNVAAIVMFVVFVAFTLYITYWASKKNKTASDYYSAGGKITGFQNGLA IAGDYMSAASFLGISALVYTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQKEIRTLSACGSLVVV AFYLIAQMVGAGKLIQLLFGLDYAVAVVLVGILMCLYVLFGGMLATTWVQIIKAVMLLSGASFMALMVMKHVNFDFNMLF SEAIKVHPKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFG AILLVSTNPAFKDAAGALLGGNNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKAGKAN EKDEIRISKITTIALAVVAIFLGIAFESQNIAFMVGLAFSVAASCNFPILLLSMYWKNLTTRGAMIGGWMGLISAVVLMV LGPTIWVQILHHEKAIFPYEYPALFSIAIAFVGIWFFSITDKSKAAEGERALFYPQFVRSQTGLGASGAVSH >Mature_552_residues MIRRLSAALGLAAFAPTLWAADALTGAVQKQPLNVAAIVMFVVFVAFTLYITYWASKKNKTASDYYSAGGKITGFQNGLA IAGDYMSAASFLGISALVYTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQKEIRTLSACGSLVVV AFYLIAQMVGAGKLIQLLFGLDYAVAVVLVGILMCLYVLFGGMLATTWVQIIKAVMLLSGASFMALMVMKHVNFDFNMLF SEAIKVHPKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFG AILLVSTNPAFKDAAGALLGGNNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKAGKAN EKDEIRISKITTIALAVVAIFLGIAFESQNIAFMVGLAFSVAASCNFPILLLSMYWKNLTTRGAMIGGWMGLISAVVLMV LGPTIWVQILHHEKAIFPYEYPALFSIAIAFVGIWFFSITDKSKAAEGERALFYPQFVRSQTGLGASGAVSH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=453, Percent_Identity=24.5033112582781, Blast_Score=107, Evalue=4e-23, Organism=Escherichia coli, GI1790503, Length=552, Percent_Identity=78.2608695652174, Blast_Score=866, Evalue=0.0, Organism=Escherichia coli, GI1787251, Length=457, Percent_Identity=25.164113785558, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI87082237, Length=453, Percent_Identity=21.1920529801325, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 58872; Mature: 58872
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRLSAALGLAAFAPTLWAADALTGAVQKQPLNVAAIVMFVVFVAFTLYITYWASKKNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TASDYYSAGGKITGFQNGLAIAGDYMSAASFLGISALVYTSGYDGLIYSIGFLVGWPIIL CHHHHHHCCCCEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FLIAERLRNLGKYTFADVASYRLKQKEIRTLSACGSLVVVAFYLIAQMVGAGKLIQLLFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LDYAVAVVLVGILMCLYVLFGGMLATTWVQIIKAVMLLSGASFMALMVMKHVNFDFNMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH SEAIKVHPKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSV HHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH LYATGFIGYFYILTFIIGFGAILLVSTNPAFKDAAGALLGGNNMAAVHLADAVGGSLFLG HHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCEECCCCEEEEEEHHHHHHHHHHH FISAVAFATILAVVAGLTLAGASAVSHDLYASVIKAGKANEKDEIRISKITTIALAVVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHH FLGIAFESQNIAFMVGLAFSVAASCNFPILLLSMYWKNLTTRGAMIGGWMGLISAVVLMV HHHHHCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LGPTIWVQILHHEKAIFPYEYPALFSIAIAFVGIWFFSITDKSKAAEGERALFYPQFVRS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEECHHHHHH QTGLGASGAVSH CCCCCCCCCCCC >Mature Secondary Structure MIRRLSAALGLAAFAPTLWAADALTGAVQKQPLNVAAIVMFVVFVAFTLYITYWASKKNK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC TASDYYSAGGKITGFQNGLAIAGDYMSAASFLGISALVYTSGYDGLIYSIGFLVGWPIIL CHHHHHHCCCCEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FLIAERLRNLGKYTFADVASYRLKQKEIRTLSACGSLVVVAFYLIAQMVGAGKLIQLLFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LDYAVAVVLVGILMCLYVLFGGMLATTWVQIIKAVMLLSGASFMALMVMKHVNFDFNMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH SEAIKVHPKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSV HHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH LYATGFIGYFYILTFIIGFGAILLVSTNPAFKDAAGALLGGNNMAAVHLADAVGGSLFLG HHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCEECCCCEEEEEEHHHHHHHHHHH FISAVAFATILAVVAGLTLAGASAVSHDLYASVIKAGKANEKDEIRISKITTIALAVVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHH FLGIAFESQNIAFMVGLAFSVAASCNFPILLLSMYWKNLTTRGAMIGGWMGLISAVVLMV HHHHHCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LGPTIWVQILHHEKAIFPYEYPALFSIAIAFVGIWFFSITDKSKAAEGERALFYPQFVRS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEECHHHHHH QTGLGASGAVSH CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA