| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is asnB [H]
Identifier: 66046975
GI number: 66046975
Start: 4464461
End: 4466233
Strand: Direct
Name: asnB [H]
Synonym: Psyr_3747
Alternate gene names: 66046975
Gene position: 4464461-4466233 (Clockwise)
Preceding gene: 66046973
Following gene: 66046976
Centisome position: 73.26
GC content: 61.2
Gene sequence:
>1773_bases ATGTGCGGATTAGCAGGTGAATTACGTTTCGACCATCAACCAGCGGACTTAGCCGCTGTTGAACGCATTACCCATGAGCT GGCGCCTCGCGGCCCGGATGCGTGGGGGTTTCATAGCCAGGGGCCGGTTGCCCTTGGTCATCGTCGCCTGAAAATCATGG ACCTGTCGGACGGCTCGGCGCAGCCGATGATCGACAGCAATCTGGGCCTGTCCCTGGCCTTCAACGGCGCGATCTACAAC TTTCCTGAATTGCGTGCCGAGTTGGAAAGCCTTGGCTATCAGTTCCATTCCGGCGGTGACACCGAAGTGTTGCTCAAGGG CTATCACGCCTGGGGCGCAGACATGCTGCCCAAGCTCAATGGCATGTTCGCCTTTGCCATCTGGGAACGTGACAGCAAGC AGCTGTTCATCGCCCGTGACCGCCTCGGCGTCAAGCCGTTGTACCTGTCAAAAACCGACAAGCGCCTGCGCTTCGCGTCC TCGCTGCCTGCCTTGCTCAAGGGCGGTGATATCAGCGGGATGCTTGATCCGGTGGCGCTCAACCATTACCTCAACTTCCA TGCGGTAGTGCCTGCGCCGCGCACCCTGCTGGCCGGCGTCGAAAAACTTCCGCCAGCCAGCTGGATGCGTATCGACGCCA GCGGCAAGGTCGAACAGAAAGTCTGGTGGACGCTGCCCTACGGCCCGCACGAAGACGAGAAAAACCTCACCCTCGAAGAC TGGCGCGACCGCGTACTGGACAGCACGCGTGAAGCGGTAGCGATTCGTCAGCGTGCTGCAGTGGACGTCGGTGTGCTGCT GTCCGGCGGCGTCGACTCGAGCATGCTGGTCGGTCTGTTGCGCGAAGTGGGCGTCGAGGACCTGTCGACCTTCTCTATCG GTTTCCAGGATGCCGGTGGCGAGCGCGGTGACGAATTTCAGTATTCCGATCTGATCGCCAAGCATTACGGCACGCGCCAT CACCAGTTGCGTATTCAGGAACGCGAGATCATCGAGCAGTTGCCTGCGGCGTTCCGCGCCATGAGCGAACCGATGGTCAG CCACGACTGCATCGCCTTCTACCTGCTGTCGCGTGAAGTGTCAAAACACTGCAAGGTGGTACAGAGCGGCCAGGGCGCTG ACGAACTGTTCGCCGGTTACCACTGGTACCCGCAAGTCGACGGCGCGAGCGATCCGGTTGCCGCCTACCGCGATGCATTC GTCGACCGCAGCTACGCGGAATACGCCGAGACCGTGCAGCCGAAGTGGCGCACTGCCAACGACGCAGCCGGTGATTTCGT TCGCGATCACTTTGCCCAGCCAGGCGCCAGCGCTGCTGTCGACAAGGCGTTGCGTCTGGACAGCACGGTGATGCTGGTCG ATGACCCGGTCAAGCGTGTCGACAACATGACCATGGCCTGGGGCCTGGAAGCGCGCACGCCGTTCCTGGACTATCGTCTG GTCGAACTGTCGGCTCGCATCCCGGGTAAATTCAAGCTGCCCGACGGTGGCAAACAGGTGCTGAAAGAAGCCGCACGCAT GGTCATTCCTTCGGAAGTGATCGACCGCAAAAAAGGCTACTTCCCGGTGCCTGGCCTCAAACACTTGCAGGGCGACACGC TTAACTGGGTGCGCGAGCTGCTGACCGACTCCAGTCAGGACCGCGGCCTGTTCAACCCTGCCATGGTCGACAAGTTGCTG ACCAACCCCGAGGGCCAGCTCACGCCATTGCGCGGCTCCAAGCTGTGGCAACTGGCAGCGCTGAACCTGTGGCTCAGCGA ACAGGGACTGTGA
Upstream 100 bases:
>100_bases TATAACTTTTTGATCTAAAACTACCATGCCCTCACTGGGTCAGTTTCTGGGTGACTGCACTTTCTCAGTCACCTCCCCAA CGGAAACCCGGTAAGGACTT
Downstream 100 bases:
>100_bases TCGATGAAACAGAACGCGACGACTTATAGCCAGCGCCTGTTGCGCGGCCAGTCGCCCTCGTATGAACGTCTGCAGGCGCG ACTCGCTGAAGACGGCAGCC
Product: asparagine synthase, glutamine-hydrolyzing
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MCGLAGELRFDHQPADLAAVERITHELAPRGPDAWGFHSQGPVALGHRRLKIMDLSDGSAQPMIDSNLGLSLAFNGAIYN FPELRAELESLGYQFHSGGDTEVLLKGYHAWGADMLPKLNGMFAFAIWERDSKQLFIARDRLGVKPLYLSKTDKRLRFAS SLPALLKGGDISGMLDPVALNHYLNFHAVVPAPRTLLAGVEKLPPASWMRIDASGKVEQKVWWTLPYGPHEDEKNLTLED WRDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREVGVEDLSTFSIGFQDAGGERGDEFQYSDLIAKHYGTRH HQLRIQEREIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVSKHCKVVQSGQGADELFAGYHWYPQVDGASDPVAAYRDAF VDRSYAEYAETVQPKWRTANDAAGDFVRDHFAQPGASAAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRL VELSARIPGKFKLPDGGKQVLKEAARMVIPSEVIDRKKGYFPVPGLKHLQGDTLNWVRELLTDSSQDRGLFNPAMVDKLL TNPEGQLTPLRGSKLWQLAALNLWLSEQGL
Sequences:
>Translated_590_residues MCGLAGELRFDHQPADLAAVERITHELAPRGPDAWGFHSQGPVALGHRRLKIMDLSDGSAQPMIDSNLGLSLAFNGAIYN FPELRAELESLGYQFHSGGDTEVLLKGYHAWGADMLPKLNGMFAFAIWERDSKQLFIARDRLGVKPLYLSKTDKRLRFAS SLPALLKGGDISGMLDPVALNHYLNFHAVVPAPRTLLAGVEKLPPASWMRIDASGKVEQKVWWTLPYGPHEDEKNLTLED WRDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREVGVEDLSTFSIGFQDAGGERGDEFQYSDLIAKHYGTRH HQLRIQEREIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVSKHCKVVQSGQGADELFAGYHWYPQVDGASDPVAAYRDAF VDRSYAEYAETVQPKWRTANDAAGDFVRDHFAQPGASAAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRL VELSARIPGKFKLPDGGKQVLKEAARMVIPSEVIDRKKGYFPVPGLKHLQGDTLNWVRELLTDSSQDRGLFNPAMVDKLL TNPEGQLTPLRGSKLWQLAALNLWLSEQGL >Mature_590_residues MCGLAGELRFDHQPADLAAVERITHELAPRGPDAWGFHSQGPVALGHRRLKIMDLSDGSAQPMIDSNLGLSLAFNGAIYN FPELRAELESLGYQFHSGGDTEVLLKGYHAWGADMLPKLNGMFAFAIWERDSKQLFIARDRLGVKPLYLSKTDKRLRFAS SLPALLKGGDISGMLDPVALNHYLNFHAVVPAPRTLLAGVEKLPPASWMRIDASGKVEQKVWWTLPYGPHEDEKNLTLED WRDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREVGVEDLSTFSIGFQDAGGERGDEFQYSDLIAKHYGTRH HQLRIQEREIIEQLPAAFRAMSEPMVSHDCIAFYLLSREVSKHCKVVQSGQGADELFAGYHWYPQVDGASDPVAAYRDAF VDRSYAEYAETVQPKWRTANDAAGDFVRDHFAQPGASAAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRL VELSARIPGKFKLPDGGKQVLKEAARMVIPSEVIDRKKGYFPVPGLKHLQGDTLNWVRELLTDSSQDRGLFNPAMVDKLL TNPEGQLTPLRGSKLWQLAALNLWLSEQGL
Specific function: Main asparagine synthetase in vegetative cells [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1786889, Length=563, Percent_Identity=25.9325044404973, Blast_Score=149, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6325403, Length=589, Percent_Identity=25.6366723259762, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321563, Length=647, Percent_Identity=24.8840803709428, Blast_Score=121, Evalue=3e-28, Organism=Drosophila melanogaster, GI45553209, Length=569, Percent_Identity=25.8347978910369, Blast_Score=126, Evalue=5e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 65596; Mature: 65596
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGLAGELRFDHQPADLAAVERITHELAPRGPDAWGFHSQGPVALGHRRLKIMDLSDGSA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCC QPMIDSNLGLSLAFNGAIYNFPELRAELESLGYQFHSGGDTEVLLKGYHAWGADMLPKLN CCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEECCCCCCEEEEEECCCCCCHHHHHHC GMFAFAIWERDSKQLFIARDRLGVKPLYLSKTDKRLRFASSLPALLKGGDISGMLDPVAL CEEEEEEEECCCCEEEEEECCCCCCEEEECCCHHHHHHHHCCHHHHCCCCCCCCCCHHHH NHYLNFHAVVPAPRTLLAGVEKLPPASWMRIDASGKVEQKVWWTLPYGPHEDEKNLTLED HHHCCEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHH WRDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREVGVEDLSTFSIGFQDAGG HHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCHHHHHHEEECCCCCCC ERGDEFQYSDLIAKHYGTRHHQLRIQEREIIEQLPAAFRAMSEPMVSHDCIAFYLLSREV CCCCCCHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SKHCKVVQSGQGADELFAGYHWYPQVDGASDPVAAYRDAFVDRSYAEYAETVQPKWRTAN HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCC DAAGDFVRDHFAQPGASAAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRL CHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCHHHHHCCCEEEECCCCCCCCCCEEE VELSARIPGKFKLPDGGKQVLKEAARMVIPSEVIDRKKGYFPVPGLKHLQGDTLNWVREL EEECCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHCCCCHHHHHHHH LTDSSQDRGLFNPAMVDKLLTNPEGQLTPLRGSKLWQLAALNLWLSEQGL HCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MCGLAGELRFDHQPADLAAVERITHELAPRGPDAWGFHSQGPVALGHRRLKIMDLSDGSA CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCC QPMIDSNLGLSLAFNGAIYNFPELRAELESLGYQFHSGGDTEVLLKGYHAWGADMLPKLN CCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCEEECCCCCCEEEEEECCCCCCHHHHHHC GMFAFAIWERDSKQLFIARDRLGVKPLYLSKTDKRLRFASSLPALLKGGDISGMLDPVAL CEEEEEEEECCCCEEEEEECCCCCCEEEECCCHHHHHHHHCCHHHHCCCCCCCCCCHHHH NHYLNFHAVVPAPRTLLAGVEKLPPASWMRIDASGKVEQKVWWTLPYGPHEDEKNLTLED HHHCCEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCHHH WRDRVLDSTREAVAIRQRAAVDVGVLLSGGVDSSMLVGLLREVGVEDLSTFSIGFQDAGG HHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHCHHHHHHEEECCCCCCC ERGDEFQYSDLIAKHYGTRHHQLRIQEREIIEQLPAAFRAMSEPMVSHDCIAFYLLSREV CCCCCCHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SKHCKVVQSGQGADELFAGYHWYPQVDGASDPVAAYRDAFVDRSYAEYAETVQPKWRTAN HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCC DAAGDFVRDHFAQPGASAAVDKALRLDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRL CHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCHHHHHCCCEEEECCCCCCCCCCEEE VELSARIPGKFKLPDGGKQVLKEAARMVIPSEVIDRKKGYFPVPGLKHLQGDTLNWVREL EEECCCCCCCEECCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHCCCCHHHHHHHH LTDSSQDRGLFNPAMVDKLLTNPEGQLTPLRGSKLWQLAALNLWLSEQGL HCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8755891; 10498721 [H]