Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is 66046967

Identifier: 66046967

GI number: 66046967

Start: 4454325

End: 4454912

Strand: Direct

Name: 66046967

Synonym: Psyr_3739

Alternate gene names: NA

Gene position: 4454325-4454912 (Clockwise)

Preceding gene: 66046954

Following gene: 66046968

Centisome position: 73.1

GC content: 61.73

Gene sequence:

>588_bases
ATGTCCTTCGCTGAGCAATTAACCCGCCTGCAAGTCTTCCTCGATGCAGATGAACTGCACGAAGAAGCACTGGACTACGT
GGCCGCGCATGGCTACCTGACCGCCCTGTCCATCTGCGCTGAAGAGGTGCCGGAACGCGAGTGGATCGACGCGCTGTTCT
CCGAGCCGCCGCAGTACTCCAGCGAAGCGCAACAGACAGAAGTCGAAGCGACGCTGATCGCCCTCAAGGCACACATTGCC
CGCCAGCTGGCTTCGGACGAAGAGTTCGAGCTGCCCTGCGATCTGGACCTGGGCGACGACCCGGATGATTCCGACCTGCG
CGGCTGGTGCATCGGCTTCATGGAAGGCGTGTTCCTGCGTGAAAACGCCTGGTTCGAAAGTGCCGAGGAAGAAGTCAGCG
AAATGCTCCTGCCGATCATGGTCGGTTCGGGCCTGTTCGACGAGCAGCCGGAGTTCGCCGACATCGCCCAGGACGCTAAC
CTGATGGACGACATGATCGTGGAGATCCCCGAAGCGCTGACCGCCCTGTACCTGCTCTGCCAGGCACCGGACGAAAAGCC
GGCGATCCTCAAGCCCCGCCACCACTGA

Upstream 100 bases:

>100_bases
ACATGAGCGGTCGAAATTAACTGCAATTGGCCTGCGCGCTGGCGCCACGGACGCTCAGGGCCTAGAATCCAGCATCGTTT
ATTTTCAAGGTAGCGCTTCC

Downstream 100 bases:

>100_bases
GTCGGCGCCTATGGCGCAAGGCTCACCGCGCACCAGCCGTCACCGGTCGGTGCGCTATCTGCTTGTAGCGATTGGCTGGC
TGAGCGTGGTGCTGGGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: YgfB And YecA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSFAEQLTRLQVFLDADELHEEALDYVAAHGYLTALSICAEEVPEREWIDALFSEPPQYSSEAQQTEVEATLIALKAHIA
RQLASDEEFELPCDLDLGDDPDDSDLRGWCIGFMEGVFLRENAWFESAEEEVSEMLLPIMVGSGLFDEQPEFADIAQDAN
LMDDMIVEIPEALTALYLLCQAPDEKPAILKPRHH

Sequences:

>Translated_195_residues
MSFAEQLTRLQVFLDADELHEEALDYVAAHGYLTALSICAEEVPEREWIDALFSEPPQYSSEAQQTEVEATLIALKAHIA
RQLASDEEFELPCDLDLGDDPDDSDLRGWCIGFMEGVFLRENAWFESAEEEVSEMLLPIMVGSGLFDEQPEFADIAQDAN
LMDDMIVEIPEALTALYLLCQAPDEKPAILKPRHH
>Mature_194_residues
SFAEQLTRLQVFLDADELHEEALDYVAAHGYLTALSICAEEVPEREWIDALFSEPPQYSSEAQQTEVEATLIALKAHIAR
QLASDEEFELPCDLDLGDDPDDSDLRGWCIGFMEGVFLRENAWFESAEEEVSEMLLPIMVGSGLFDEQPEFADIAQDANL
MDDMIVEIPEALTALYLLCQAPDEKPAILKPRHH

Specific function: Unknown

COG id: COG3318

COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21933; Mature: 21801

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAEQLTRLQVFLDADELHEEALDYVAAHGYLTALSICAEEVPEREWIDALFSEPPQYS
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
SEAQQTEVEATLIALKAHIARQLASDEEFELPCDLDLGDDPDDSDLRGWCIGFMEGVFLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
ENAWFESAEEEVSEMLLPIMVGSGLFDEQPEFADIAQDANLMDDMIVEIPEALTALYLLC
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAPDEKPAILKPRHH
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFAEQLTRLQVFLDADELHEEALDYVAAHGYLTALSICAEEVPEREWIDALFSEPPQYS
CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
SEAQQTEVEATLIALKAHIARQLASDEEFELPCDLDLGDDPDDSDLRGWCIGFMEGVFLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
ENAWFESAEEEVSEMLLPIMVGSGLFDEQPEFADIAQDANLMDDMIVEIPEALTALYLLC
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAPDEKPAILKPRHH
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA