| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ubiG
Identifier: 66046879
GI number: 66046879
Start: 4336233
End: 4336931
Strand: Direct
Name: ubiG
Synonym: Psyr_3650
Alternate gene names: 66046879
Gene position: 4336233-4336931 (Clockwise)
Preceding gene: 66046878
Following gene: 66046880
Centisome position: 71.16
GC content: 62.23
Gene sequence:
>699_bases ATGAGCAACGTCGACCGCGCAGAAATCGCCAAATTCGAGGCCCTGGCCCATCGCTGGTGGGACCGCGAAAGCGAATTCAA GCCGCTGCATGACATCAACCCGCTGCGCGTCAACTGGATCGACGAGCGCGTCGGTCTGGCGGGCAAGAAGGTGCTGGACG TCGGTTGTGGCGGCGGCATCCTCAGCGAGGCCATGGCCCTGCGCGGCGCCACGGTGACCGGCATCGACATGGGCGAAGCG CCGCTGGCAGTCGCACAGCTGCACCAGCTCGAATCGGGTGTCAGCGTCGAATACCGGCAGATCACTGCCGAGGACATGGC CGAAGAAATGCCCGAGCAGTACGATGTGGTGACTTGCCTGGAAATGCTCGAGCACGTGCCGGACCCATCCTCGGTGATCC GCGCCTGCTACCGCATGGTCAAGCCTGGCGGTCAGGTATTCTTCTCGACCATCAACCGTAATCCGAAAGCCTATCTGTTC GCTGTGGTCGGCGCCGAATACATCCTCAACCTGCTGCCGCGCGGCACCCACGACTTCAAGAAATTCATCCGCCCTTCCGA GCTGGGCGCCTGGAGCCGTGACGCCGGCCTGCAGGTCAAGGACGTCATCGGCCTGACCTACAACCCGCTGACCAAGCATT ACAAGTTGACCTCCGATGTCGGCGTCAACTACATGATCCAGACCCTGCGGGAGGCATGA
Upstream 100 bases:
>100_bases GGTAAAGCCGAATAATTCGATTCGGACCGAACACATGTCAGTCAGGCTTATCTATAAGCCTGACTGACGAAAAAGAATTT TGAGTTCAAGAGGGACACCC
Downstream 100 bases:
>100_bases CAGATGCGCCTGAGAGCGGTTTTATTCGACATGGACGGCACTCTGCTCGACACCGCACCGGACTTCATCGCCATTGCCCA GGCGATGCTTGCCGATCGCA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVGLAGKKVLDVGCGGGILSEAMALRGATVTGIDMGEA PLAVAQLHQLESGVSVEYRQITAEDMAEEMPEQYDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLF AVVGAEYILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYMIQTLREA
Sequences:
>Translated_232_residues MSNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVGLAGKKVLDVGCGGGILSEAMALRGATVTGIDMGEA PLAVAQLHQLESGVSVEYRQITAEDMAEEMPEQYDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLF AVVGAEYILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYMIQTLREA >Mature_231_residues SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVGLAGKKVLDVGCGGGILSEAMALRGATVTGIDMGEAP LAVAQLHQLESGVSVEYRQITAEDMAEEMPEQYDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFA VVGAEYILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYMIQTLREA
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=237, Percent_Identity=36.7088607594937, Blast_Score=180, Evalue=1e-45, Organism=Escherichia coli, GI1788564, Length=227, Percent_Identity=64.7577092511013, Blast_Score=307, Evalue=4e-85, Organism=Caenorhabditis elegans, GI115533050, Length=240, Percent_Identity=32.9166666666667, Blast_Score=128, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6324476, Length=286, Percent_Identity=30.4195804195804, Blast_Score=119, Evalue=5e-28, Organism=Drosophila melanogaster, GI281365311, Length=246, Percent_Identity=32.1138211382114, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI24585589, Length=267, Percent_Identity=29.9625468164794, Blast_Score=131, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_PSE14 (Q48FM4)
Other databases:
- EMBL: CP000058 - RefSeq: YP_275812.1 - ProteinModelPortal: Q48FM4 - STRING: Q48FM4 - GeneID: 3557257 - GenomeReviews: CP000058_GR - KEGG: psp:PSPPH_3670 - eggNOG: COG2227 - HOGENOM: HBG738842 - OMA: DHAEIAK - PhylomeDB: Q48FM4 - ProtClustDB: PRK05134 - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 25922; Mature: 25791
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVGLAGKKVLDVGCGGGI CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCEEEECCCCHH LSEAMALRGATVTGIDMGEAPLAVAQLHQLESGVSVEYRQITAEDMAEEMPEQYDVVTCL HHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH EMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEYILNLLPRGTHDFK HHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCEEEHHHHHHHHHHHHCCCCHHHHH KFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYMIQTLREA HHCCHHHCCCCCCCCCCCHHHHHCCCCCCHHHHEECHHHCCHHHHHHHHHCC >Mature Secondary Structure SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVGLAGKKVLDVGCGGGI CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHCCCCCCEEEECCCCHH LSEAMALRGATVTGIDMGEAPLAVAQLHQLESGVSVEYRQITAEDMAEEMPEQYDVVTCL HHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHH EMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEYILNLLPRGTHDFK HHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCCEEEHHHHHHHHHHHHCCCCHHHHH KFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYMIQTLREA HHCCHHHCCCCCCCCCCCHHHHHCCCCCCHHHHEECHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA