Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is galE [H]

Identifier: 66046867

GI number: 66046867

Start: 4320070

End: 4321050

Strand: Reverse

Name: galE [H]

Synonym: Psyr_3638

Alternate gene names: 66046867

Gene position: 4321050-4320070 (Counterclockwise)

Preceding gene: 66046868

Following gene: 66046866

Centisome position: 70.91

GC content: 58.0

Gene sequence:

>981_bases
ATGAGCGGTGATGTTGCATTGGTTGCAATAACAGGTGCGACAGGTTTCGTGGGCAGTGCCGTGGTTCGTCGGCTGATCGA
GCGCACAGGCTGTTCTGTGAGGGTTGCAGTCCGGGGCGCTTATGTCGTTTCCAGCCCGCGCATCGATGTTGTCAGTGCAC
AATCACTGGCACCGGATAATCAATGGGCAAGCTTTGTAACCGGCGCGGATGTGGTGATTCATTGTGCTGCGCGAGTTCAT
GTGCTCAATGAGACCGCCGACGCACCGGATCAGGAGTACTTTCGCGCCAATGTCACCGCAACCCTGAATCTGGCCGAGCA
GGCCGCAGCGGCAGGCGTCAAGCGCTTCATCTTTATCAGTTCCATCAAGGCCAATGGCGAGTCTACGCTTGCGGGTGCGC
CATTCACGGCCAGCGACCCGTGCACTCCGCTGGATGCCTACGGCGTGTCAAAACACAGGGCTGAGGAGGGCTTGCGCGAG
TTGTCTGCCCGCACCGGTATGCAGGTGGTGATCATTCGACCGGTGCTGGTCTACGGTCCGGGGGTCAAGGCTAATTTCAG
AAGCATGATGCGCTGGCTGGACAAAGGGCTGCCGTTGCCGCTCGGGTCCATCGATAATCGCAGAAGCCTGGTGGCGGTGG
ATAATCTGGCAGATCTGGTGACGGTCTGTGTCGATCATCCTGCTGCGGCTGACCAGACGTTTCTGGTCAGTGACGGGGAC
GATCTGTCCACGTCCAGGCTGCTGCGCGAAATGGGCAAGGCCTTGGGCAAACCTGCCCGGCTGCTGCCGGTGCCGGCCTC
GCTGTTGAAAGCGGCTGCAGCACTGTTGGGCAAGAAAGCTTTTTCACAACGGCTGTGCAACTCGCTGCAGGTCGATATCA
GTAAAACCTGTACGATGCTGGATTGGCATCCACCTGTGAGTATTGAACACGCCATGCAGGACACTGCTCGATATTATCTG
GAACACGACAAGCATGATTGA

Upstream 100 bases:

>100_bases
TGAGCGTCATCATGAAAGTTATAAAATGGATTGACGATATTTCAGTTGTCAAAAAGCGTTACTTGAGCAATATTTGGCCG
ATTTGGAAGGGCGTGTTTGC

Downstream 100 bases:

>100_bases
GTGGCTGTCGGTAATCGCTATTGCCTTTCTGTCTCTGATTCTAACGGCGTTGCTGCGCAAGTATGCGCTTGCCAAAAGTC
TGATCGACATTCCAAACGCC

Product: UDP-glucose 4-epimerase, putative

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSGDVALVAITGATGFVGSAVVRRLIERTGCSVRVAVRGAYVVSSPRIDVVSAQSLAPDNQWASFVTGADVVIHCAARVH
VLNETADAPDQEYFRANVTATLNLAEQAAAAGVKRFIFISSIKANGESTLAGAPFTASDPCTPLDAYGVSKHRAEEGLRE
LSARTGMQVVIIRPVLVYGPGVKANFRSMMRWLDKGLPLPLGSIDNRRSLVAVDNLADLVTVCVDHPAAADQTFLVSDGD
DLSTSRLLREMGKALGKPARLLPVPASLLKAAAALLGKKAFSQRLCNSLQVDISKTCTMLDWHPPVSIEHAMQDTARYYL
EHDKHD

Sequences:

>Translated_326_residues
MSGDVALVAITGATGFVGSAVVRRLIERTGCSVRVAVRGAYVVSSPRIDVVSAQSLAPDNQWASFVTGADVVIHCAARVH
VLNETADAPDQEYFRANVTATLNLAEQAAAAGVKRFIFISSIKANGESTLAGAPFTASDPCTPLDAYGVSKHRAEEGLRE
LSARTGMQVVIIRPVLVYGPGVKANFRSMMRWLDKGLPLPLGSIDNRRSLVAVDNLADLVTVCVDHPAAADQTFLVSDGD
DLSTSRLLREMGKALGKPARLLPVPASLLKAAAALLGKKAFSQRLCNSLQVDISKTCTMLDWHPPVSIEHAMQDTARYYL
EHDKHD
>Mature_325_residues
SGDVALVAITGATGFVGSAVVRRLIERTGCSVRVAVRGAYVVSSPRIDVVSAQSLAPDNQWASFVTGADVVIHCAARVHV
LNETADAPDQEYFRANVTATLNLAEQAAAAGVKRFIFISSIKANGESTLAGAPFTASDPCTPLDAYGVSKHRAEEGLREL
SARTGMQVVIIRPVLVYGPGVKANFRSMMRWLDKGLPLPLGSIDNRRSLVAVDNLADLVTVCVDHPAAADQTFLVSDGDD
LSTSRLLREMGKALGKPARLLPVPASLLKAAAALLGKKAFSQRLCNSLQVDISKTCTMLDWHPPVSIEHAMQDTARYYLE
HDKHD

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 34859; Mature: 34728

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDVALVAITGATGFVGSAVVRRLIERTGCSVRVAVRGAYVVSSPRIDVVSAQSLAPDN
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEECCCCCCCC
QWASFVTGADVVIHCAARVHVLNETADAPDQEYFRANVTATLNLAEQAAAAGVKRFIFIS
HHHHHHCCCHHHHHHHHHHEEECCCCCCCCHHHHEECCEEEEHHHHHHHHHHHHHEEEEE
SIKANGESTLAGAPFTASDPCTPLDAYGVSKHRAEEGLRELSARTGMQVVIIRPVLVYGP
EEECCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEECC
GVKANFRSMMRWLDKGLPLPLGSIDNRRSLVAVDNLADLVTVCVDHPAAADQTFLVSDGD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEEECCC
DLSTSRLLREMGKALGKPARLLPVPASLLKAAAALLGKKAFSQRLCNSLQVDISKTCTML
CCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEE
DWHPPVSIEHAMQDTARYYLEHDKHD
ECCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGDVALVAITGATGFVGSAVVRRLIERTGCSVRVAVRGAYVVSSPRIDVVSAQSLAPDN
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEEECCCCCCCC
QWASFVTGADVVIHCAARVHVLNETADAPDQEYFRANVTATLNLAEQAAAAGVKRFIFIS
HHHHHHCCCHHHHHHHHHHEEECCCCCCCCHHHHEECCEEEEHHHHHHHHHHHHHEEEEE
SIKANGESTLAGAPFTASDPCTPLDAYGVSKHRAEEGLRELSARTGMQVVIIRPVLVYGP
EEECCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEECC
GVKANFRSMMRWLDKGLPLPLGSIDNRRSLVAVDNLADLVTVCVDHPAAADQTFLVSDGD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCEEEEECCC
DLSTSRLLREMGKALGKPARLLPVPASLLKAAAALLGKKAFSQRLCNSLQVDISKTCTML
CCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEE
DWHPPVSIEHAMQDTARYYLEHDKHD
ECCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]