| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046858
Identifier: 66046858
GI number: 66046858
Start: 4311435
End: 4312571
Strand: Reverse
Name: 66046858
Synonym: Psyr_3629
Alternate gene names: NA
Gene position: 4312571-4311435 (Counterclockwise)
Preceding gene: 66046862
Following gene: 66046857
Centisome position: 70.77
GC content: 61.21
Gene sequence:
>1137_bases ATGAAAGCCTCGTGGGATATTTTTTGCAGCGTAGTCGACAACTACGGTGATGCGGGCGTGACCTGGCGTCTGGCGCGCCA GCTGGTCGCCGAGCATGGCCTGCAGGTGCGTTTATGGATCGATGACCTGTCGGCCTTCGTTCGCTTGTGCCCCGGTGCCG ATCTCCAGGCCCGGCAACAATGGCAAGAGGGCGTGAGCGTTTGCCAGTGGCCGAGCGAATGGGTGAACACCGATATTCCT GATGGGGTCATCGAAGCGTTCGCCTGCCGCCTGCCGACGCGCTACACCGAATCGATGCTGCAGCGTTCGCCAAGGCCGTT GTGGCTGAATCTGGATTACCTCAGCGCCGAGGACTGGGTGTCTGGCTGCCACGGCCTGCCTTCGCCACAATCGAACGGTT TGAAGAAGTTCTTTTTCTTTCCGGGTTTTTCCGAGGCCACCGGTGGCCTGTTGCGCGAAAAAAACCTGATCGAACAGCGC CAGGCGTTTCAGCAAAACAGCGCGGCAAGGCAAGCGTTCCTGAGCGGATTGGGTATCGACGCGTTGGCCGGTGCGCGTCT GATCTCAGTATTTGCCTATGAAAATCCCGCGCTCGGCAGGTGGCTCGATGCCCTGGCCAGCGACAGCCGGCCGACGCATC TTCTGGTGCCGGAGGGACGCATCCTCGGCGACCTGCAGCGCTGGCTGGGTGTCGACGATCCGCTGCGCGCCGGGTTCACT CAGGTCAGCGGCGGGCTGACGGTTCAGGTCCTGCCGTTCATCCGTCAGGAGCTTTACGACCAACTGCTCTGGAGCTGCGA TTTCAATATCGTGCGCGGCGAGGACTCGTTCGTGCGTGCGCAGTGGTCGGGGCGGCCAATGCTCTGGCACATCTACCAGC AGGAAGACGACGCGCATCTGCCCAAGCTCGATGCGTTTTTAACGCTCTATCTCGCGGGTCTTTCTCCGGCCGCCGCGCAG GCGGTGAATCAGTTCTGGCAGCGCTGGAATGTCGGCGGCGACCTTGGCGAATGCTGGACGGCGCTGGCAGAACACTGGTC GCAGATCGAGCGCAATGCCGAACGCTGGTGCCAGCAACAAGCCGCACAGACTGATCTTGCCACGGCGCTGGTGCAGTTTT ATGTAAATTCGCTATGA
Upstream 100 bases:
>100_bases GAAACGGTGCTGCATGTTTGCCCGGCAGCATCAGGCTGGTGACAACAGACCTTTGTGAACGACAATCAGCGTTTTTGCCA TCCAGCCTCAGGGAGCCAGG
Downstream 100 bases:
>100_bases TACGCGGCCTTGATACAAGGCTCTGTACGAAAAAGGCCTGCGCAGGTTGTTTCTCGTACAGAGCCTTTGGTTAATTCCAT CCAAATTCGGATATATGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKASWDIFCSVVDNYGDAGVTWRLARQLVAEHGLQVRLWIDDLSAFVRLCPGADLQARQQWQEGVSVCQWPSEWVNTDIP DGVIEAFACRLPTRYTESMLQRSPRPLWLNLDYLSAEDWVSGCHGLPSPQSNGLKKFFFFPGFSEATGGLLREKNLIEQR QAFQQNSAARQAFLSGLGIDALAGARLISVFAYENPALGRWLDALASDSRPTHLLVPEGRILGDLQRWLGVDDPLRAGFT QVSGGLTVQVLPFIRQELYDQLLWSCDFNIVRGEDSFVRAQWSGRPMLWHIYQQEDDAHLPKLDAFLTLYLAGLSPAAAQ AVNQFWQRWNVGGDLGECWTALAEHWSQIERNAERWCQQQAAQTDLATALVQFYVNSL
Sequences:
>Translated_378_residues MKASWDIFCSVVDNYGDAGVTWRLARQLVAEHGLQVRLWIDDLSAFVRLCPGADLQARQQWQEGVSVCQWPSEWVNTDIP DGVIEAFACRLPTRYTESMLQRSPRPLWLNLDYLSAEDWVSGCHGLPSPQSNGLKKFFFFPGFSEATGGLLREKNLIEQR QAFQQNSAARQAFLSGLGIDALAGARLISVFAYENPALGRWLDALASDSRPTHLLVPEGRILGDLQRWLGVDDPLRAGFT QVSGGLTVQVLPFIRQELYDQLLWSCDFNIVRGEDSFVRAQWSGRPMLWHIYQQEDDAHLPKLDAFLTLYLAGLSPAAAQ AVNQFWQRWNVGGDLGECWTALAEHWSQIERNAERWCQQQAAQTDLATALVQFYVNSL >Mature_378_residues MKASWDIFCSVVDNYGDAGVTWRLARQLVAEHGLQVRLWIDDLSAFVRLCPGADLQARQQWQEGVSVCQWPSEWVNTDIP DGVIEAFACRLPTRYTESMLQRSPRPLWLNLDYLSAEDWVSGCHGLPSPQSNGLKKFFFFPGFSEATGGLLREKNLIEQR QAFQQNSAARQAFLSGLGIDALAGARLISVFAYENPALGRWLDALASDSRPTHLLVPEGRILGDLQRWLGVDDPLRAGFT QVSGGLTVQVLPFIRQELYDQLLWSCDFNIVRGEDSFVRAQWSGRPMLWHIYQQEDDAHLPKLDAFLTLYLAGLSPAAAQ AVNQFWQRWNVGGDLGECWTALAEHWSQIERNAERWCQQQAAQTDLATALVQFYVNSL
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42662; Mature: 42662
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASWDIFCSVVDNYGDAGVTWRLARQLVAEHGLQVRLWIDDLSAFVRLCPGADLQARQQ CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCHHHHHH WQEGVSVCQWPSEWVNTDIPDGVIEAFACRLPTRYTESMLQRSPRPLWLNLDYLSAEDWV HHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHH SGCHGLPSPQSNGLKKFFFFPGFSEATGGLLREKNLIEQRQAFQQNSAARQAFLSGLGID HHCCCCCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALAGARLISVFAYENPALGRWLDALASDSRPTHLLVPEGRILGDLQRWLGVDDPLRAGFT HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHCHH QVSGGLTVQVLPFIRQELYDQLLWSCDFNIVRGEDSFVRAQWSGRPMLWHIYQQEDDAHL HHCCCCEEEHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCCC PKLDAFLTLYLAGLSPAAAQAVNQFWQRWNVGGDLGECWTALAEHWSQIERNAERWCQQQ CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAQTDLATALVQFYVNSL HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKASWDIFCSVVDNYGDAGVTWRLARQLVAEHGLQVRLWIDDLSAFVRLCPGADLQARQQ CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCHHHHHH WQEGVSVCQWPSEWVNTDIPDGVIEAFACRLPTRYTESMLQRSPRPLWLNLDYLSAEDWV HHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHH SGCHGLPSPQSNGLKKFFFFPGFSEATGGLLREKNLIEQRQAFQQNSAARQAFLSGLGID HHCCCCCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALAGARLISVFAYENPALGRWLDALASDSRPTHLLVPEGRILGDLQRWLGVDDPLRAGFT HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCCHHHHCHH QVSGGLTVQVLPFIRQELYDQLLWSCDFNIVRGEDSFVRAQWSGRPMLWHIYQQEDDAHL HHCCCCEEEHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCEEEEEEECCCCCCC PKLDAFLTLYLAGLSPAAAQAVNQFWQRWNVGGDLGECWTALAEHWSQIERNAERWCQQQ CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAQTDLATALVQFYVNSL HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA