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The map label for this gene is efp [H]

Identifier: 66046857

GI number: 66046857

Start: 4310766

End: 4311335

Strand: Reverse

Name: efp [H]

Synonym: Psyr_3628

Alternate gene names: 66046857

Gene position: 4311335-4310766 (Counterclockwise)

Preceding gene: 66046858

Following gene: 66046854

Centisome position: 70.75

GC content: 54.21

Gene sequence:

>570_bases
ATGAAAACTGGTAAAGAGCTGAAACCCGGTACCGTGATCCGTCTCGAGAACGATCCATGGCTGGTTCAGAAAGCTGAGTT
CACCAAGTCCGGTCGTAACAGCGCGATCATGAAGACCAAGCTGAAAAACCTGCTGACCGGTTACAAGACCGAGATCGTTT
ACAGCGCCGACGACAAGCTGGACGACGTGATCCTGGATCGCAAGGAAGCCACCCTGTCTTTCATCAGCGGTGACACCTAC
ACGTTCATGGACACCTCTGACTACACCATGTACGAGCTGAACGCCGAAGACATCGAAAGCGTTCTGCCTTTCGTCGAAGA
AGGCATGACTGACGTTTGCGAAGCCGTGTTCTTCGAAGACCGTCTGGTTTCCGTAGAGCTGCCGACCACTATCGTGCGTC
AGGTTGACTACACCGAAGGCTCCGCTCGTGGCGACACGTCGGGCAAGGTCATGAAGCCTGCCAAACTGAAAAACGGCACC
GAGCTGAGCGTTGCCGACTTCATCGAAATCGGCGACATGATCGAGATCGATACCCGTGAAGGCGGTTCCTACAAAGGCCG
TGCGAAGTAA

Upstream 100 bases:

>100_bases
ATACGCGGCCTTGATACAAGGCTCTGTACGAAAAAGGCCTGCGCAGGTTGTTTCTCGTACAGAGCCTTTGGTTAATTCCA
TCCAAATTCGGATATATGCA

Downstream 100 bases:

>100_bases
GCATGGTTTTGTAACCCCGTTACGCAAAAAACCCGCATCGCTGCGGGTTTTTTTGTGCCTGAAATTCTTGCCGGGCAGCC
GTTGCCCAGGCCTCAGACAG

Product: elongation factor P

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKTGKELKPGTVIRLENDPWLVQKAEFTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGDTY
TFMDTSDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFEDRLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGT
ELSVADFIEIGDMIEIDTREGGSYKGRAK

Sequences:

>Translated_189_residues
MKTGKELKPGTVIRLENDPWLVQKAEFTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGDTY
TFMDTSDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFEDRLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGT
ELSVADFIEIGDMIEIDTREGGSYKGRAK
>Mature_189_residues
MKTGKELKPGTVIRLENDPWLVQKAEFTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKLDDVILDRKEATLSFISGDTY
TFMDTSDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFEDRLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGT
ELSVADFIEIGDMIEIDTREGGSYKGRAK

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI87082061, Length=190, Percent_Identity=30, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790590, Length=184, Percent_Identity=27.1739130434783, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 21124; Mature: 21124

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGKELKPGTVIRLENDPWLVQKAEFTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKL
CCCCCCCCCCEEEEECCCCCEEEEHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCH
DDVILDRKEATLSFISGDTYTFMDTSDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFED
HHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHC
RLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGTELSVADFIEIGDMIEIDTRE
EEEEEECCHHHHHHCCCCCCCCCCCCCCCEECCHHCCCCCEECHHHHHHCCCEEEEECCC
GGSYKGRAK
CCCCCCCCC
>Mature Secondary Structure
MKTGKELKPGTVIRLENDPWLVQKAEFTKSGRNSAIMKTKLKNLLTGYKTEIVYSADDKL
CCCCCCCCCCEEEEECCCCCEEEEHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCH
DDVILDRKEATLSFISGDTYTFMDTSDYTMYELNAEDIESVLPFVEEGMTDVCEAVFFED
HHHHHCCCCCEEEEECCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHC
RLVSVELPTTIVRQVDYTEGSARGDTSGKVMKPAKLKNGTELSVADFIEIGDMIEIDTRE
EEEEEECCHHHHHHCCCCCCCCCCCCCCCEECCHHCCCCCEECHHHHHHCCCEEEEECCC
GGSYKGRAK
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA