| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046831
Identifier: 66046831
GI number: 66046831
Start: 4283061
End: 4284644
Strand: Direct
Name: 66046831
Synonym: Psyr_3602
Alternate gene names: NA
Gene position: 4283061-4284644 (Clockwise)
Preceding gene: 66046830
Following gene: 66046832
Centisome position: 70.29
GC content: 64.65
Gene sequence:
>1584_bases ATGACCACACCTGCCACCCGATCATTCGCCGACATTCGCCAGGCCTTGCTGGACCGTCAGGAGCTGGCCCTGGTAGACGT CCGCGAAGAGGCTCCCTTTGCCCAGGCTCATCCGCTGTTTGCCGTGAACATCCCGTTGTCGAAGCTGGAGCTGGAGGTTT TCTCCCGCATCCCGCGACGCGACACGGCCGTGACCCTGTACGACGATGGCGAAGGCTTGGCCCAGATCGCCCTGCAACGC CTGCAGACACTGGGCTACAGCGACGTGAAACTGCTCGACGGCGGCCTGCAGGGCTGGCGCGCGGCTGGCGGCGAGCTGTT CATCGACGTGAATGTGCCGAGCAAGGCGTTTGGCGAGCTGGTGGAGCATCACCGCGCCACCCCGTCGCTGGCCGCAGAAG AGGTCAAGCGCCTGCTCGACAGCAATGCCGACGTGGTGGTGCTCGATGCCCGGCGCTATGACGAATACCAGACCATGAGC ATTCCCGGCGGCATCAGCGTGCCGGGTGCCGAACTGGTGCTGCGGGCACGTGAGCTGGCACCGGATCCCACTACTCGAAT CATCGTCAATTGTGCCGGTCGCACGCGCAGCATCATCGGCACCCAGTCGCTGGTCAACGCGGGTCTGCCCAACCCGATCA ACGCACTGCGCAACGGCACCATTGGCTGGCTGCTGGCCGGCCAGACGCTGGACCATGGCCAGAACCGGCGTTTTGCGGCA GTCAGTGAAGAGACCCGCGAAACCGCCAGTGCCGATGCCCGCAAGGTGGCCGATCGCGCCAGCGTCAAACGTGCCAGCCG TGCCGATCTGCAACGCTGGCAAGCCGGGGCTTCACGCACCACTTACCTGTTCGATGTACGCACCCCGGAAGAGTTTGCCA AAGGCCACCTGCCCGGCGCGCGCTCTACACCGGGCGGGCAACTGGTGCAGGAAACCGATCATTTCGCCAGCGTACGCGGT GCGCGAATCGCTCTGCTGGACGACGACGGCGTACGCGCCAACATGTCGGCCTCCTGGCTGGCACAGTTGGGCTGGGACGT GGCGGTGATCGATGACCTGGATGCGGCCGACTTCAGCGAACAGGGCGACTGGGACGCGCCCTTCCCGACGCCGCCGCAGG TGGAGGCGATCAGCGTCGAGACTCTCACCCAGTGGCAGACACAGGTAAAGGTGGCGGTGCTGGATTTCACTGCCAGCGCC AACTATGTCAAACAGCATATTCCCGGCGCCTGGTGGACGTTGCGTGCCGACCTGAAACAGGCGCTGCACAAGCTGCCGGC TGCTGACCGCTATGTCTTGACCTGCGGCAGCAGCCGTCTGGCGCGCTTTGCCGTAGCCGACCTCGAAGCGTTGACCGACA AGCCGGTGTTCCTCCTCGAAGGCGGCACCGCCAGCTGGATCAAGGCAGGTCTGCCGCTGGAGCACGGCGAAAGCCGACTG GCCTCGCCACGCATCGATCGCTATCGCCGCCCCTATGAAGGCACCGATGCTCCGCGTGAAGCCATGCAAGCCTACCTGAA CTGGGAGTTCGGGCTGGTCGAGCAGTTGGGACGTGACGGGACACATGGGTTTTACGTGATTTGA
Upstream 100 bases:
>100_bases GTGCGGTCTATGACCTCGACGGCAGCGAAAAACTGTTCATCTCCGGCTATTCGAACGCCGCCACTGCCCATCAGGATCAG CCAACAGGGAGCCCGACCCC
Downstream 100 bases:
>100_bases TGCCGTTGAGTACACCGCGCAGCGCATTGGCACAAGCGCCAAGTGGGAGCGAGCTTGCTCGCGAAGAGGGCGCTACATTC GGTGCATTTTCTGCGTCTGG
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Thiosulfate Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Transferase; Sulfurtransferase; Rhodanese Domain Protein/Cystathionine Beta-Lyase; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Proteine; Transferase/Cystathione Beta-Lyase; Rhodanese-Like Domain-Containing; Rhodanese-Like Sulfur Transferase; Thiosulfate Sulfurtransferase Rhodanese-Like; Rhodanese-Like Protein Sulfurtransferase; Cystathionine Beta-Lyase
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MTTPATRSFADIRQALLDRQELALVDVREEAPFAQAHPLFAVNIPLSKLELEVFSRIPRRDTAVTLYDDGEGLAQIALQR LQTLGYSDVKLLDGGLQGWRAAGGELFIDVNVPSKAFGELVEHHRATPSLAAEEVKRLLDSNADVVVLDARRYDEYQTMS IPGGISVPGAELVLRARELAPDPTTRIIVNCAGRTRSIIGTQSLVNAGLPNPINALRNGTIGWLLAGQTLDHGQNRRFAA VSEETRETASADARKVADRASVKRASRADLQRWQAGASRTTYLFDVRTPEEFAKGHLPGARSTPGGQLVQETDHFASVRG ARIALLDDDGVRANMSASWLAQLGWDVAVIDDLDAADFSEQGDWDAPFPTPPQVEAISVETLTQWQTQVKVAVLDFTASA NYVKQHIPGAWWTLRADLKQALHKLPAADRYVLTCGSSRLARFAVADLEALTDKPVFLLEGGTASWIKAGLPLEHGESRL ASPRIDRYRRPYEGTDAPREAMQAYLNWEFGLVEQLGRDGTHGFYVI
Sequences:
>Translated_527_residues MTTPATRSFADIRQALLDRQELALVDVREEAPFAQAHPLFAVNIPLSKLELEVFSRIPRRDTAVTLYDDGEGLAQIALQR LQTLGYSDVKLLDGGLQGWRAAGGELFIDVNVPSKAFGELVEHHRATPSLAAEEVKRLLDSNADVVVLDARRYDEYQTMS IPGGISVPGAELVLRARELAPDPTTRIIVNCAGRTRSIIGTQSLVNAGLPNPINALRNGTIGWLLAGQTLDHGQNRRFAA VSEETRETASADARKVADRASVKRASRADLQRWQAGASRTTYLFDVRTPEEFAKGHLPGARSTPGGQLVQETDHFASVRG ARIALLDDDGVRANMSASWLAQLGWDVAVIDDLDAADFSEQGDWDAPFPTPPQVEAISVETLTQWQTQVKVAVLDFTASA NYVKQHIPGAWWTLRADLKQALHKLPAADRYVLTCGSSRLARFAVADLEALTDKPVFLLEGGTASWIKAGLPLEHGESRL ASPRIDRYRRPYEGTDAPREAMQAYLNWEFGLVEQLGRDGTHGFYVI >Mature_526_residues TTPATRSFADIRQALLDRQELALVDVREEAPFAQAHPLFAVNIPLSKLELEVFSRIPRRDTAVTLYDDGEGLAQIALQRL QTLGYSDVKLLDGGLQGWRAAGGELFIDVNVPSKAFGELVEHHRATPSLAAEEVKRLLDSNADVVVLDARRYDEYQTMSI PGGISVPGAELVLRARELAPDPTTRIIVNCAGRTRSIIGTQSLVNAGLPNPINALRNGTIGWLLAGQTLDHGQNRRFAAV SEETRETASADARKVADRASVKRASRADLQRWQAGASRTTYLFDVRTPEEFAKGHLPGARSTPGGQLVQETDHFASVRGA RIALLDDDGVRANMSASWLAQLGWDVAVIDDLDAADFSEQGDWDAPFPTPPQVEAISVETLTQWQTQVKVAVLDFTASAN YVKQHIPGAWWTLRADLKQALHKLPAADRYVLTCGSSRLARFAVADLEALTDKPVFLLEGGTASWIKAGLPLEHGESRLA SPRIDRYRRPYEGTDAPREAMQAYLNWEFGLVEQLGRDGTHGFYVI
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57802; Mature: 57670
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPATRSFADIRQALLDRQELALVDVREEAPFAQAHPLFAVNIPLSKLELEVFSRIPRR CCCCCCCHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCC DTAVTLYDDGEGLAQIALQRLQTLGYSDVKLLDGGLQGWRAAGGELFIDVNVPSKAFGEL CCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCEEEEEECCCHHHHHHH VEHHRATPSLAAEEVKRLLDSNADVVVLDARRYDEYQTMSIPGGISVPGAELVLRARELA HHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCC PDPTTRIIVNCAGRTRSIIGTQSLVNAGLPNPINALRNGTIGWLLAGQTLDHGQNRRFAA CCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCCCCCCCEEEE VSEETRETASADARKVADRASVKRASRADLQRWQAGASRTTYLFDVRTPEEFAKGHLPGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCC RSTPGGQLVQETDHFASVRGARIALLDDDGVRANMSASWLAQLGWDVAVIDDLDAADFSE CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCC QGDWDAPFPTPPQVEAISVETLTQWQTQVKVAVLDFTASANYVKQHIPGAWWTLRADLKQ CCCCCCCCCCCCCEEEEEHHHHHHHHHEEEEEEEEECCCHHHHHHHCCCCCEEHHHHHHH ALHKLPAADRYVLTCGSSRLARFAVADLEALTDKPVFLLEGGTASWIKAGLPLEHGESRL HHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCHHC ASPRIDRYRRPYEGTDAPREAMQAYLNWEFGLVEQLGRDGTHGFYVI CCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEEC >Mature Secondary Structure TTPATRSFADIRQALLDRQELALVDVREEAPFAQAHPLFAVNIPLSKLELEVFSRIPRR CCCCCCHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCC DTAVTLYDDGEGLAQIALQRLQTLGYSDVKLLDGGLQGWRAAGGELFIDVNVPSKAFGEL CCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCEEEEEECCCHHHHHHH VEHHRATPSLAAEEVKRLLDSNADVVVLDARRYDEYQTMSIPGGISVPGAELVLRARELA HHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCC PDPTTRIIVNCAGRTRSIIGTQSLVNAGLPNPINALRNGTIGWLLAGQTLDHGQNRRFAA CCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECCCCCCCCCCEEEE VSEETRETASADARKVADRASVKRASRADLQRWQAGASRTTYLFDVRTPEEFAKGHLPGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCC RSTPGGQLVQETDHFASVRGARIALLDDDGVRANMSASWLAQLGWDVAVIDDLDAADFSE CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCC QGDWDAPFPTPPQVEAISVETLTQWQTQVKVAVLDFTASANYVKQHIPGAWWTLRADLKQ CCCCCCCCCCCCCEEEEEHHHHHHHHHEEEEEEEEECCCHHHHHHHCCCCCEEHHHHHHH ALHKLPAADRYVLTCGSSRLARFAVADLEALTDKPVFLLEGGTASWIKAGLPLEHGESRL HHHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCHHC ASPRIDRYRRPYEGTDAPREAMQAYLNWEFGLVEQLGRDGTHGFYVI CCCCHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA