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The map label for this gene is yhhS [C]

Identifier: 66046807

GI number: 66046807

Start: 4260255

End: 4261454

Strand: Direct

Name: yhhS [C]

Synonym: Psyr_3578

Alternate gene names: 66046807

Gene position: 4260255-4261454 (Clockwise)

Preceding gene: 66046806

Following gene: 161486729

Centisome position: 69.91

GC content: 62.33

Gene sequence:

>1200_bases
ATGTCCGAGACACAGCAAAAAACACCACAAACCCCGATGGCCGTTACCCTGACCGTCGTGTCCATCGTGATGTTCACCTT
TATCGGCTACCTGAACATCGGCATTCCCCTCGCCGTTCTGCCCGGCTATGTCCACAGTGATCTGGGCTTTGGTGCAGTCA
TCGCCGGGCTGGTCATCAGTGTGCAATACCTGGCCACGCTGATCAGTCGGCCCTGGTCGAGTCGCATCATCGACAATCTG
GGCAGCAAGAAAGCTGTGCAGATCGGGCTGACCGGTTGCGGGCTGAGCGGTGTGTTCATGCTGGTGCCGGTGTGGCTGGA
CAGCTGGCCGATGGCGAGCCTGGTGATTCTGCTGATTGGCCGGGTGATCCTCGGTGCTGCGGAAAGCCTGGTCGGTTCTG
GTTCGATTGGCTGGGGCATCGGCCGGGTCGGCGCACAGAACACCGCCAAGGTCATTTCCTGGAATGGCATCGCCAGCTAC
GGCGCGCTGGCCATCGGTGCGCCACTGGGCGTATGGATGGTTGACGAACTCGGCCTGTGGACAGTGGGCGTGAGCATCAT
GCTGCTGTGCGCGCTGGGCCTGTACCTGACCTGGCATAAAGAGCCGGCGCCTATTGTGCAGGGTGAGCGACTGCCATTCA
TGCATGTGCTGGGGCGAGTGTTTCCGCATGGCATGGGCCTGGCATTGGGCGGTATCGGTTTCGGCACTATCGCGACGTTC
ATCACCCTGTATTACGCGAGTAACCACTGGCCGAATGCCGCGCTGTGCCTGACGCTGTTTGGTGGCAGTTTCATCGCCGC
GCGCCTGCTGTTCGGCAACCTGATCAATCGCCTGGGCGGCTTTCGAGTGGCGATTGTCTGCATGTCCGTGGAAAGCCTGG
GGCTGTTGCTGCTGTGGCTGGCACCCACTCCGGACCTGGCGCTGGCTGGCGCGGCGCTGACCGGCTTCGGATTCTCGCTG
GTGTTCCCGGCGCTGGGCGTGGAAGCGGTCAATCTGGTCCCGGCGTCAAGCCGAGGCGCGGCAGTGGGCGCCTACTCGCT
GTTCATCGACCTGTCACTGGGCATCACCGGGCCACTGGCAGGCGCCATTGCCGCCGGTTTCGGCTTCGTCTCGATCTTCC
TGTTCGCGGCACTGGCGTCACTCACCGGGCTGGCGTTGAGCGTTTATCTGTACAAGCAGGCACAGGTGCTGCGCCAGTAA

Upstream 100 bases:

>100_bases
ATCGCCCGATGCATCGGTATGATGAGCACTTCGAGAGCTTGCTAAGGGTTTTCCCTGCCCGCTCGAACGCCATGCCCGCA
AAAGAACGAAAGCCCGCCCC

Downstream 100 bases:

>100_bases
TGATCGGAGCTCATAGTCATACAGGTCCTGAAGAGCCCGAAAAGCGGAGTTTTCAGGCTGCTGCCCGCAGGGCGTAGGAG
CGAACTTGTTCGCGAAGACA

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSETQQKTPQTPMAVTLTVVSIVMFTFIGYLNIGIPLAVLPGYVHSDLGFGAVIAGLVISVQYLATLISRPWSSRIIDNL
GSKKAVQIGLTGCGLSGVFMLVPVWLDSWPMASLVILLIGRVILGAAESLVGSGSIGWGIGRVGAQNTAKVISWNGIASY
GALAIGAPLGVWMVDELGLWTVGVSIMLLCALGLYLTWHKEPAPIVQGERLPFMHVLGRVFPHGMGLALGGIGFGTIATF
ITLYYASNHWPNAALCLTLFGGSFIAARLLFGNLINRLGGFRVAIVCMSVESLGLLLLWLAPTPDLALAGAALTGFGFSL
VFPALGVEAVNLVPASSRGAAVGAYSLFIDLSLGITGPLAGAIAAGFGFVSIFLFAALASLTGLALSVYLYKQAQVLRQ

Sequences:

>Translated_399_residues
MSETQQKTPQTPMAVTLTVVSIVMFTFIGYLNIGIPLAVLPGYVHSDLGFGAVIAGLVISVQYLATLISRPWSSRIIDNL
GSKKAVQIGLTGCGLSGVFMLVPVWLDSWPMASLVILLIGRVILGAAESLVGSGSIGWGIGRVGAQNTAKVISWNGIASY
GALAIGAPLGVWMVDELGLWTVGVSIMLLCALGLYLTWHKEPAPIVQGERLPFMHVLGRVFPHGMGLALGGIGFGTIATF
ITLYYASNHWPNAALCLTLFGGSFIAARLLFGNLINRLGGFRVAIVCMSVESLGLLLLWLAPTPDLALAGAALTGFGFSL
VFPALGVEAVNLVPASSRGAAVGAYSLFIDLSLGITGPLAGAIAAGFGFVSIFLFAALASLTGLALSVYLYKQAQVLRQ
>Mature_398_residues
SETQQKTPQTPMAVTLTVVSIVMFTFIGYLNIGIPLAVLPGYVHSDLGFGAVIAGLVISVQYLATLISRPWSSRIIDNLG
SKKAVQIGLTGCGLSGVFMLVPVWLDSWPMASLVILLIGRVILGAAESLVGSGSIGWGIGRVGAQNTAKVISWNGIASYG
ALAIGAPLGVWMVDELGLWTVGVSIMLLCALGLYLTWHKEPAPIVQGERLPFMHVLGRVFPHGMGLALGGIGFGTIATFI
TLYYASNHWPNAALCLTLFGGSFIAARLLFGNLINRLGGFRVAIVCMSVESLGLLLLWLAPTPDLALAGAALTGFGFSLV
FPALGVEAVNLVPASSRGAAVGAYSLFIDLSLGITGPLAGAIAAGFGFVSIFLFAALASLTGLALSVYLYKQAQVLRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=393, Percent_Identity=50.1272264631043, Blast_Score=330, Evalue=1e-91,
Organism=Escherichia coli, GI1788662, Length=390, Percent_Identity=41.025641025641, Blast_Score=268, Evalue=4e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41595; Mature: 41464

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETQQKTPQTPMAVTLTVVSIVMFTFIGYLNIGIPLAVLPGYVHSDLGFGAVIAGLVIS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCHHHHHHHHHHH
VQYLATLISRPWSSRIIDNLGSKKAVQIGLTGCGLSGVFMLVPVWLDSWPMASLVILLIG
HHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHH
RVILGAAESLVGSGSIGWGIGRVGAQNTAKVISWNGIASYGALAIGAPLGVWMVDELGLW
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHCHHHHCCCCCHHHHHHCCHH
TVGVSIMLLCALGLYLTWHKEPAPIVQGERLPFMHVLGRVFPHGMGLALGGIGFGTIATF
HHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHH
ITLYYASNHWPNAALCLTLFGGSFIAARLLFGNLINRLGGFRVAIVCMSVESLGLLLLWL
HHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCEEEEEE
APTPDLALAGAALTGFGFSLVFPALGVEAVNLVPASSRGAAVGAYSLFIDLSLGITGPLA
CCCCCHHHHHHHHHHCCHHHHHHHHCCHHEEEECCCCCCCEEEEEEEEEEEECCCCCHHH
GAIAAGFGFVSIFLFAALASLTGLALSVYLYKQAQVLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETQQKTPQTPMAVTLTVVSIVMFTFIGYLNIGIPLAVLPGYVHSDLGFGAVIAGLVIS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCHHHHHHHHHHH
VQYLATLISRPWSSRIIDNLGSKKAVQIGLTGCGLSGVFMLVPVWLDSWPMASLVILLIG
HHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHH
RVILGAAESLVGSGSIGWGIGRVGAQNTAKVISWNGIASYGALAIGAPLGVWMVDELGLW
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHCHHHHCCCCCHHHHHHCCHH
TVGVSIMLLCALGLYLTWHKEPAPIVQGERLPFMHVLGRVFPHGMGLALGGIGFGTIATF
HHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCHHHHHHH
ITLYYASNHWPNAALCLTLFGGSFIAARLLFGNLINRLGGFRVAIVCMSVESLGLLLLWL
HHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCEEEEEE
APTPDLALAGAALTGFGFSLVFPALGVEAVNLVPASSRGAAVGAYSLFIDLSLGITGPLA
CCCCCHHHHHHHHHHCCHHHHHHHHCCHHEEEECCCCCCCEEEEEEEEEEEECCCCCHHH
GAIAAGFGFVSIFLFAALASLTGLALSVYLYKQAQVLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]