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The map label for this gene is occM [H]

Identifier: 66046798

GI number: 66046798

Start: 4250963

End: 4251661

Strand: Reverse

Name: occM [H]

Synonym: Psyr_3569

Alternate gene names: 66046798

Gene position: 4251661-4250963 (Counterclockwise)

Preceding gene: 66046799

Following gene: 66046797

Centisome position: 69.77

GC content: 61.09

Gene sequence:

>699_bases
ATGATCTTTGACTACAACGTGATCTGGGACAGTCTGCCGCTGTACTTCGGCGGGCTGCTGACCACCCTGAAGCTGCTGGC
GATTTCGCTCGCGTTCGGGCTGCTGGCGGCATTGCCGCTGGGCTTGATGCGGGTCTCGAAAAACCCTTGGGTGAACATGC
CGGCCTGGCTGTACACCTACGTGATTCGCGGCACGCCGATGCTGGTTCAGCTGTTCCTGATCTACTACGGACTGGCCCAG
TTCGACGCGGTGCGCGAAAGCTTTTTGTGGCCCTGGCTGTCCAGCGCCACCTTCTGTGCGTGCCTGGCATTCACCATCAA
TACCAGCGCCTACACGGCGGAGATCATCGCTGGCAGCCTCAAGGCCACTCCGGCGGGTGAAATCGAGGCCGCGCGGGCCA
TGGGCATGTCGAAAGCCAAGATGTACCGGCGCATTCTGCTGCCCTCGGCCTTGCGCCGGGCACTGCCGCAGTACAGCAAC
GAGGTCATCATGATGCTGCAGACTACCAGTCTGGCGTCCATCGTGACCCTGATCGACATCACGGGCGCGGCCCGTACGGT
CAACGCGCAGTTCTACCTGCCTTTCGAGGCTTATATCACCGCAGGTGTTTTCTATCTGGGCCTGACATTCATTCTGGTGC
GGCTGTTCAAGATCGCCGAACGCCGCTGGCTGGGCTACCTCGCCCCACGGAAGGTCTGA

Upstream 100 bases:

>100_bases
TGGCGGTTGCGGCGATGTACCTGGTGATCACCAGTGTGTCGCTGCTCGCCTTGCGTTACCTCGAAAAACGCTACTCGGTA
GGCGTGAGGGCGGCTGACCT

Downstream 100 bases:

>100_bases
AATGCAAAGAACCGATCATGTATTGCCGTGGAGCACCCTCGGCACCGAGCGCACGCTGAGTGTCTTTCGCTTCGGCACCG
GCGAGCGCAAGGCTTACATC

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMPAWLYTYVIRGTPMLVQLFLIYYGLAQ
FDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSN
EVIMMLQTTSLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLGLTFILVRLFKIAERRWLGYLAPRKV

Sequences:

>Translated_232_residues
MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMPAWLYTYVIRGTPMLVQLFLIYYGLAQ
FDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSN
EVIMMLQTTSLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLGLTFILVRLFKIAERRWLGYLAPRKV
>Mature_232_residues
MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMPAWLYTYVIRGTPMLVQLFLIYYGLAQ
FDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSN
EVIMMLQTTSLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLGLTFILVRLFKIAERRWLGYLAPRKV

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788645, Length=215, Percent_Identity=48.8372093023256, Blast_Score=198, Evalue=2e-52,
Organism=Escherichia coli, GI1787086, Length=223, Percent_Identity=36.322869955157, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1787030, Length=224, Percent_Identity=33.0357142857143, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788226, Length=200, Percent_Identity=34, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1788646, Length=208, Percent_Identity=31.7307692307692, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787087, Length=177, Percent_Identity=25.9887005649718, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082239, Length=210, Percent_Identity=29.0476190476191, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786873, Length=223, Percent_Identity=29.5964125560538, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786874, Length=214, Percent_Identity=22.8971962616822, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI48994930, Length=123, Percent_Identity=30.8943089430894, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25982; Mature: 25982

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMPAWLYTY
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VIRGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
KATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDI
CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
TGAARTVNAQFYLPFEAYITAGVFYLGLTFILVRLFKIAERRWLGYLAPRKV
CCCCEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMPAWLYTY
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
VIRGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFTINTSAYTAEIIAGSL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
KATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDI
CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
TGAARTVNAQFYLPFEAYITAGVFYLGLTFILVRLFKIAERRWLGYLAPRKV
CCCCEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA