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The map label for this gene is 66046737

Identifier: 66046737

GI number: 66046737

Start: 4183611

End: 4184909

Strand: Reverse

Name: 66046737

Synonym: Psyr_3508

Alternate gene names: NA

Gene position: 4184909-4183611 (Counterclockwise)

Preceding gene: 66046738

Following gene: 66046736

Centisome position: 68.68

GC content: 62.2

Gene sequence:

>1299_bases
ATGCGTGTTATTTCCCGAAACGTGGCTGCATGGAGCGCAGGCCTGATTGTTGTGGCGATTTTTCTCAGTGCGTGGCTCAG
CCATCCACAGCACCGTATTGCGCCCTTTGCGGTCAGCCCGGCGCCAGTTGGCGCTGAGAGCGTGGCGCCCAAGGCGTCCT
ATATGTCGCGCTTCGCGTCTTCCGACCTGGACGATTTCGTGCATTCTTCAGCCGTGACGGCGTTGCCCGGCGGCGACCTG
ATGTCGGTATGGTTCGCCGGCTCTCGCGAAGGAGCGGGGGACGTCGAAATACGCACCTCGCGCTTCGATGCGGCCAGTGG
CGAGTGGGGCGGCGAGCAGGTGCTGGCAACCCGCGAGTCCACCCAGGCGGGCACCGGCAAATACATCCGCAAACTGGGCA
ATCCGGTGATCGCCCTGGCTCCGGACAATCGCCTGTGGCTGTTCTACGTTTCAGTCTCGGTCGGCGGCTGGGCGGGCAGC
ACGGTCAACGCCATGGTCTCCAGCGACATGGGCGCCAGCTGGTCGCCGCCGTGGCAACTGGTGACAACACCGTTTCTGAA
CATCAGTACGCTGGTACGCGGTGCGCCGGTGTTTCATGCCGACGGTTCGATCGGCCTGCCGGTCTACCACGAGTTTCTCG
GCAAGTTTGCCGAATACCTGTACCTGAGCGCCGACGGTGAGGTCATCGACAAGTTTCGCCTCAGCCGTGGCAACAATTCC
CTGCAGCCCACCGTCGTGCCTTTGGATGGGCAGCGTGCCGTGGCCTTGCTGCGCTATGCCGGCGAGACGTTCCACCGGGT
GCTGGCCAGCCGCACCGAAGACGGCGGGCAGAGCTGGAGCGAGCCGTATCCGTTGACCCCGAGCAACCCCAATTCTTCGC
TGGCTGCGGTCGGTGTGCCGGGCAAGGGCCTGCTGGTGGCGCTCAATGACTTGCGCGAGGGGCGCTTCAAACTCAGTCTG
TACGGGACTGACGAGGAGATGAACGTCTGGCGGCCATTGATGGATTTCGACAAGTCGCCCGATCCGCTGGGCACGCCGTT
TACCCTTGAGGCGTACAAGGAGGTGATCGGCGAGGGCTTCCGCAGCTCCAGTGGTGCCCTGCGTCAACCGATGGAAGAGG
CGTTTCTGAGCAATCTGGACCAACGCGTCTGCTCGCCTCAGGGCTGCGATTTCGAATACGAATACCCGTACTTCATCCGC
AGTCCGGACGGCCTGTATCACCTGGTCTACTCATGGAATAACACCTTCATCAAGCATGTCAGCTTCAACGAGGCCTGGCT
GGCGGAGCAACTTTTATGA

Upstream 100 bases:

>100_bases
ACCTGCCCTTGTCGATGCTGACAGGCAAGCGACGTCCGTTGCCCGAAGATCGCCATCGCTGAAACCACACCTTTGTTCCT
CTTTACAGTGATGCCTCCCG

Downstream 100 bases:

>100_bases
TCGCTTTGGGATTGGCTCATCTGGCGTTTGCCTGGACCCTGTTTGTGCTGTTGGCACCCTTGACCGCATCGTTATGGTGG
CGCTGCGGCCTGCTGGCCGC

Product: BNR repeat-containing glycosyl hydrolase

Products: NA

Alternate protein names: Neuraminidase; BNR Repeat-Containing Glycosyl Hydrolase; BNR/Asp-Box Repeat Protein; Glycosyl Hydrolase Protein; Glycosyl Hydrolase BNR Repeat; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase; Inner Membrane Protein; BNR/Asp Box Repeat-Containing Protein; Sialidase

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRVISRNVAAWSAGLIVVAIFLSAWLSHPQHRIAPFAVSPAPVGAESVAPKASYMSRFASSDLDDFVHSSAVTALPGGDL
MSVWFAGSREGAGDVEIRTSRFDAASGEWGGEQVLATRESTQAGTGKYIRKLGNPVIALAPDNRLWLFYVSVSVGGWAGS
TVNAMVSSDMGASWSPPWQLVTTPFLNISTLVRGAPVFHADGSIGLPVYHEFLGKFAEYLYLSADGEVIDKFRLSRGNNS
LQPTVVPLDGQRAVALLRYAGETFHRVLASRTEDGGQSWSEPYPLTPSNPNSSLAAVGVPGKGLLVALNDLREGRFKLSL
YGTDEEMNVWRPLMDFDKSPDPLGTPFTLEAYKEVIGEGFRSSSGALRQPMEEAFLSNLDQRVCSPQGCDFEYEYPYFIR
SPDGLYHLVYSWNNTFIKHVSFNEAWLAEQLL

Sequences:

>Translated_432_residues
MRVISRNVAAWSAGLIVVAIFLSAWLSHPQHRIAPFAVSPAPVGAESVAPKASYMSRFASSDLDDFVHSSAVTALPGGDL
MSVWFAGSREGAGDVEIRTSRFDAASGEWGGEQVLATRESTQAGTGKYIRKLGNPVIALAPDNRLWLFYVSVSVGGWAGS
TVNAMVSSDMGASWSPPWQLVTTPFLNISTLVRGAPVFHADGSIGLPVYHEFLGKFAEYLYLSADGEVIDKFRLSRGNNS
LQPTVVPLDGQRAVALLRYAGETFHRVLASRTEDGGQSWSEPYPLTPSNPNSSLAAVGVPGKGLLVALNDLREGRFKLSL
YGTDEEMNVWRPLMDFDKSPDPLGTPFTLEAYKEVIGEGFRSSSGALRQPMEEAFLSNLDQRVCSPQGCDFEYEYPYFIR
SPDGLYHLVYSWNNTFIKHVSFNEAWLAEQLL
>Mature_432_residues
MRVISRNVAAWSAGLIVVAIFLSAWLSHPQHRIAPFAVSPAPVGAESVAPKASYMSRFASSDLDDFVHSSAVTALPGGDL
MSVWFAGSREGAGDVEIRTSRFDAASGEWGGEQVLATRESTQAGTGKYIRKLGNPVIALAPDNRLWLFYVSVSVGGWAGS
TVNAMVSSDMGASWSPPWQLVTTPFLNISTLVRGAPVFHADGSIGLPVYHEFLGKFAEYLYLSADGEVIDKFRLSRGNNS
LQPTVVPLDGQRAVALLRYAGETFHRVLASRTEDGGQSWSEPYPLTPSNPNSSLAAVGVPGKGLLVALNDLREGRFKLSL
YGTDEEMNVWRPLMDFDKSPDPLGTPFTLEAYKEVIGEGFRSSSGALRQPMEEAFLSNLDQRVCSPQGCDFEYEYPYFIR
SPDGLYHLVYSWNNTFIKHVSFNEAWLAEQLL

Specific function: Unknown

COG id: COG4692

COG function: function code G; Predicted neuraminidase (sialidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47204; Mature: 47204

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISRNVAAWSAGLIVVAIFLSAWLSHPQHRIAPFAVSPAPVGAESVAPKASYMSRFAS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCHHHCCCHHHHHHHHHC
SDLDDFVHSSAVTALPGGDLMSVWFAGSREGAGDVEIRTSRFDAASGEWGGEQVLATRES
CCHHHHHHHCCEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCC
TQAGTGKYIRKLGNPVIALAPDNRLWLFYVSVSVGGWAGSTVNAMVSSDMGASWSPPWQL
CCCCHHHHHHHHCCCEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEE
VTTPFLNISTLVRGAPVFHADGSIGLPVYHEFLGKFAEYLYLSADGEVIDKFRLSRGNNS
EECCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCC
LQPTVVPLDGQRAVALLRYAGETFHRVLASRTEDGGQSWSEPYPLTPSNPNSSLAAVGVP
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
GKGLLVALNDLREGRFKLSLYGTDEEMNVWRPLMDFDKSPDPLGTPFTLEAYKEVIGEGF
CCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCC
RSSSGALRQPMEEAFLSNLDQRVCSPQGCDFEYEYPYFIRSPDGLYHLVYSWNNTFIKHV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCEEEEEEECCCEEEEEE
SFNEAWLAEQLL
CCCHHHHHHHCC
>Mature Secondary Structure
MRVISRNVAAWSAGLIVVAIFLSAWLSHPQHRIAPFAVSPAPVGAESVAPKASYMSRFAS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCCHHHCCCHHHHHHHHHC
SDLDDFVHSSAVTALPGGDLMSVWFAGSREGAGDVEIRTSRFDAASGEWGGEQVLATRES
CCHHHHHHHCCEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCC
TQAGTGKYIRKLGNPVIALAPDNRLWLFYVSVSVGGWAGSTVNAMVSSDMGASWSPPWQL
CCCCHHHHHHHHCCCEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCEE
VTTPFLNISTLVRGAPVFHADGSIGLPVYHEFLGKFAEYLYLSADGEVIDKFRLSRGNNS
EECCCCCHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCCC
LQPTVVPLDGQRAVALLRYAGETFHRVLASRTEDGGQSWSEPYPLTPSNPNSSLAAVGVP
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
GKGLLVALNDLREGRFKLSLYGTDEEMNVWRPLMDFDKSPDPLGTPFTLEAYKEVIGEGF
CCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCC
RSSSGALRQPMEEAFLSNLDQRVCSPQGCDFEYEYPYFIRSPDGLYHLVYSWNNTFIKHV
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEECCCCEEEEEEECCCEEEEEE
SFNEAWLAEQLL
CCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA