| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is pobA [H]
Identifier: 66046729
GI number: 66046729
Start: 4170593
End: 4171777
Strand: Direct
Name: pobA [H]
Synonym: Psyr_3500
Alternate gene names: 66046729
Gene position: 4170593-4171777 (Clockwise)
Preceding gene: 66046727
Following gene: 66046730
Centisome position: 68.44
GC content: 61.86
Gene sequence:
>1185_bases ATGAAGACCAAGGTTGCCATTATCGGTTCAGGCCCTTCCGGGCTGCTGCTAGGCCAACTGCTGCAGCGTGCCGGCATCGA CAACGTCATCGTCGAGCGCAAGGACCCCGATTACATCCTTTCGCGCATCCGCGCCGGCGTGCTGGAACAAGGCATGACCG ACCTGTTGCGTGAAGCAGGCGTCAGTGAACGCATGGACGCAGAGGGCATGATCCATGACGGTTTCGAGCTGGCGTTCGCC GGTCGCTGCGAGCGTATCGACCTGAAGAGTCATGCCGATGGCAGGACGGTGATGGTCTACGGCCAGACCGAAGTCACCCG CGACCTGATGGCCGCGCGCGCCGCGACCGGAGCAATGACGATCTACAACGCTACGGACGTCAAAACGCACGACCTCAAGA GCGATAGTCCGTACCTGACGTTCGTGAAAGACGGCGAGACCGTGCGCCTGGACTGCGATTACATTGCCGGCTGTGACGGC TTTCACGGGGTCTCACGGCAATCGATTCCCGCTGACGCCCTCAAGGTATTCGAACGCGTCTATCCGTTCGGCTGGCTCGG CGTACTGGCCGACACGCCGCCGGTCAACGAAGAGCTGGTCTACGCCAATCACCCGCGCGGCTTTGCCTTGTGCAGCATGC GCTCGGCCATTCGCACCCGCTATTACGTGCAGGTCAGTGCCGACGAGAAGGTCGAAGACTGGTCGGACGAGCGCTTCTGG GATGAACTCAAATCCCGTCTGCCCGAGCATCTGGCAGAGCGACTGGTCACCGGCCCGTCCATCGAGAAAAGCATCGCGCC GCTGCGCAGCTTTGTGGTTGAACCCATGCAGTACGGCCGCCTGTTCCTGCTCGGCGACGCCGCGCACATCGTCCCGCCGA CCGGTGCCAAGGGCCTGAACCTGGCGGCCAGCGATGTCAGCACGCTGTACCGCATCCTGCTCAAGGTCTATCAGGAAGGC CGCACTGACCTGCTGGAAAAGTATTCACAGATCTGCCTGCGCAGAGTGTGGAAAGCCGAGCGCTTCTCCTGGTGGATGAC GTCGGTGCTGCATAACTTCCCCGACACCGACGCCTTCAGCCAGCGCATCCAGCAGACTGAACTGGACTACTACGTCGGCT CGGAAGCCGGGCGCAGGACCATTGCCGAGAACTACGTGGGCTTGCCGTATGAGGCTGTCGAGTAG
Upstream 100 bases:
>100_bases GCCTTCTTATCTCGACGGCATCCATTAAAAATGCAGGAGACAAAAACAAACACGTCCCGCTGACTAAACCTGGCAGGGAT CAAAAGACAGGACTATCGCC
Downstream 100 bases:
>100_bases AGCGTCGGCCCCGGCGCTGTGATTGCGCTGCGTACTCACAAGCCATAGGCTGCCCGTCGACATGCGTTGTGCAATCACAC AACGCATGCTCCCCGCCGCC
Product: 4-hydroxybenzoate 3-monooxygenase
Products: NA
Alternate protein names: PHBH; 4-hydroxybenzoate 3-monooxygenase [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKTKVAIIGSGPSGLLLGQLLQRAGIDNVIVERKDPDYILSRIRAGVLEQGMTDLLREAGVSERMDAEGMIHDGFELAFA GRCERIDLKSHADGRTVMVYGQTEVTRDLMAARAATGAMTIYNATDVKTHDLKSDSPYLTFVKDGETVRLDCDYIAGCDG FHGVSRQSIPADALKVFERVYPFGWLGVLADTPPVNEELVYANHPRGFALCSMRSAIRTRYYVQVSADEKVEDWSDERFW DELKSRLPEHLAERLVTGPSIEKSIAPLRSFVVEPMQYGRLFLLGDAAHIVPPTGAKGLNLAASDVSTLYRILLKVYQEG RTDLLEKYSQICLRRVWKAERFSWWMTSVLHNFPDTDAFSQRIQQTELDYYVGSEAGRRTIAENYVGLPYEAVE
Sequences:
>Translated_394_residues MKTKVAIIGSGPSGLLLGQLLQRAGIDNVIVERKDPDYILSRIRAGVLEQGMTDLLREAGVSERMDAEGMIHDGFELAFA GRCERIDLKSHADGRTVMVYGQTEVTRDLMAARAATGAMTIYNATDVKTHDLKSDSPYLTFVKDGETVRLDCDYIAGCDG FHGVSRQSIPADALKVFERVYPFGWLGVLADTPPVNEELVYANHPRGFALCSMRSAIRTRYYVQVSADEKVEDWSDERFW DELKSRLPEHLAERLVTGPSIEKSIAPLRSFVVEPMQYGRLFLLGDAAHIVPPTGAKGLNLAASDVSTLYRILLKVYQEG RTDLLEKYSQICLRRVWKAERFSWWMTSVLHNFPDTDAFSQRIQQTELDYYVGSEAGRRTIAENYVGLPYEAVE >Mature_394_residues MKTKVAIIGSGPSGLLLGQLLQRAGIDNVIVERKDPDYILSRIRAGVLEQGMTDLLREAGVSERMDAEGMIHDGFELAFA GRCERIDLKSHADGRTVMVYGQTEVTRDLMAARAATGAMTIYNATDVKTHDLKSDSPYLTFVKDGETVRLDCDYIAGCDG FHGVSRQSIPADALKVFERVYPFGWLGVLADTPPVNEELVYANHPRGFALCSMRSAIRTRYYVQVSADEKVEDWSDERFW DELKSRLPEHLAERLVTGPSIEKSIAPLRSFVVEPMQYGRLFLLGDAAHIVPPTGAKGLNLAASDVSTLYRILLKVYQEG RTDLLEKYSQICLRRVWKAERFSWWMTSVLHNFPDTDAFSQRIQQTELDYYVGSEAGRRTIAENYVGLPYEAVE
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012733 - InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.2 [H]
Molecular weight: Translated: 44218; Mature: 44218
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKVAIIGSGPSGLLLGQLLQRAGIDNVIVERKDPDYILSRIRAGVLEQGMTDLLREAG CCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC VSERMDAEGMIHDGFELAFAGRCERIDLKSHADGRTVMVYGQTEVTRDLMAARAATGAMT CCCCCCCCCCEECCEEEEECCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEE IYNATDVKTHDLKSDSPYLTFVKDGETVRLDCDYIAGCDGFHGVSRQSIPADALKVFERV EEECCCCEECCCCCCCCEEEEEECCCEEEEECCCEECCCCCCCCCCCCCCHHHHHHHHHH YPFGWLGVLADTPPVNEELVYANHPRGFALCSMRSAIRTRYYVQVSADEKVEDWSDERFW CCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHH DELKSRLPEHLAERLVTGPSIEKSIAPLRSFVVEPMQYGRLFLLGDAAHIVPPTGAKGLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCEEEEECCCEECCCCCCCCCC LAASDVSTLYRILLKVYQEGRTDLLEKYSQICLRRVWKAERFSWWMTSVLHNFPDTDAFS CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH QRIQQTELDYYVGSEAGRRTIAENYVGLPYEAVE HHHHHHHHHHEECCHHHHHHHHHHCCCCCHHHCC >Mature Secondary Structure MKTKVAIIGSGPSGLLLGQLLQRAGIDNVIVERKDPDYILSRIRAGVLEQGMTDLLREAG CCCEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC VSERMDAEGMIHDGFELAFAGRCERIDLKSHADGRTVMVYGQTEVTRDLMAARAATGAMT CCCCCCCCCCEECCEEEEECCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHHHCCCEE IYNATDVKTHDLKSDSPYLTFVKDGETVRLDCDYIAGCDGFHGVSRQSIPADALKVFERV EEECCCCEECCCCCCCCEEEEEECCCEEEEECCCEECCCCCCCCCCCCCCHHHHHHHHHH YPFGWLGVLADTPPVNEELVYANHPRGFALCSMRSAIRTRYYVQVSADEKVEDWSDERFW CCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHH DELKSRLPEHLAERLVTGPSIEKSIAPLRSFVVEPMQYGRLFLLGDAAHIVPPTGAKGLN HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCEEEEECCCEECCCCCCCCCC LAASDVSTLYRILLKVYQEGRTDLLEKYSQICLRRVWKAERFSWWMTSVLHNFPDTDAFS CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH QRIQQTELDYYVGSEAGRRTIAENYVGLPYEAVE HHHHHHHHHHEECCHHHHHHHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2465205; 10984043; 7939628; 8555229; 8312276 [H]