| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046718
Identifier: 66046718
GI number: 66046718
Start: 4158023
End: 4158490
Strand: Direct
Name: 66046718
Synonym: Psyr_3489
Alternate gene names: NA
Gene position: 4158023-4158490 (Clockwise)
Preceding gene: 66046717
Following gene: 66046719
Centisome position: 68.23
GC content: 57.69
Gene sequence:
>468_bases ATGCAAGACACTACTTTGCTGCAGATGATCACTGACGACATGGTTTCGGCCCGACAGCTTCTTGAGCTGTTGCAGGCCGA ATCACTGATTCTTCACGGCCGCGACATGGGCGAGATGGAGCAGGTGCTGGCGCAGAAACAGGCGCTGGTCATTCTTCTCG ACCAGCATGGTCGCAAACGTAGCCAGGTGCTTGCGGGCATGGGGCTGCCTGCCAATCGCAGTGGTCTCCAGCAACTGGCC AGCCAGTCGGATATCGGTGAGCAACTGCTGCTGGCCGCCGACGAACTGAACACGTTGATCAACGAATGCCAGACGCTCAA CGAGCGCAATGGTAGTCTGATCCAGTTGCAACAGGTCAGTACCGCTCACCAGCTTCGCATCCTGAACGGTGGCGATACGC CTACACTCTATGACAGCCGCGGATCGACTGCGCTTAGAGCAAAACCACGCCCTCTGAGCCAGGCGTAA
Upstream 100 bases:
>100_bases GACAGCAACCGTGTCGCCAGCAAACTGTTGAATTTCGAAACCCAACGCTAAGCCAAGGCTGGCGCTGGATATTCTGGACG CTTAAAAACCAGAGCATGCG
Downstream 100 bases:
>100_bases CTTCCTGTATCAAGGTTTCGTGCATAGTGGCAGAATGCCTGCTGTTGCGTTGCCGTAGTATTTTGCCTGGAGATTCAAGA ACGTGAATGGCTCAAGCGCG
Product: FlgN
Products: NA
Alternate protein names: Flagellar Protein FlgN; Flagella Synthesis Protein FlgN; FlgN Family Flagellar Protein; Flagella Synthesis Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MQDTTLLQMITDDMVSARQLLELLQAESLILHGRDMGEMEQVLAQKQALVILLDQHGRKRSQVLAGMGLPANRSGLQQLA SQSDIGEQLLLAADELNTLINECQTLNERNGSLIQLQQVSTAHQLRILNGGDTPTLYDSRGSTALRAKPRPLSQA
Sequences:
>Translated_155_residues MQDTTLLQMITDDMVSARQLLELLQAESLILHGRDMGEMEQVLAQKQALVILLDQHGRKRSQVLAGMGLPANRSGLQQLA SQSDIGEQLLLAADELNTLINECQTLNERNGSLIQLQQVSTAHQLRILNGGDTPTLYDSRGSTALRAKPRPLSQA >Mature_155_residues MQDTTLLQMITDDMVSARQLLELLQAESLILHGRDMGEMEQVLAQKQALVILLDQHGRKRSQVLAGMGLPANRSGLQQLA SQSDIGEQLLLAADELNTLINECQTLNERNGSLIQLQQVSTAHQLRILNGGDTPTLYDSRGSTALRAKPRPLSQA
Specific function: Unknown
COG id: COG3418
COG function: function code NUO; Flagellar biosynthesis/type III secretory pathway chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16995; Mature: 16995
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDTTLLQMITDDMVSARQLLELLQAESLILHGRDMGEMEQVLAQKQALVILLDQHGRKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCCCHH SQVLAGMGLPANRSGLQQLASQSDIGEQLLLAADELNTLINECQTLNERNGSLIQLQQVS HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHC TAHQLRILNGGDTPTLYDSRGSTALRAKPRPLSQA CHHHEEEECCCCCCCEECCCCCEEEECCCCCCCCC >Mature Secondary Structure MQDTTLLQMITDDMVSARQLLELLQAESLILHGRDMGEMEQVLAQKQALVILLDQHGRKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCCCHH SQVLAGMGLPANRSGLQQLASQSDIGEQLLLAADELNTLINECQTLNERNGSLIQLQQVS HHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHC TAHQLRILNGGDTPTLYDSRGSTALRAKPRPLSQA CHHHEEEECCCCCCCEECCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA