| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cynS [H]
Identifier: 66046712
GI number: 66046712
Start: 4153307
End: 4153774
Strand: Reverse
Name: cynS [H]
Synonym: Psyr_3483
Alternate gene names: 66046712
Gene position: 4153774-4153307 (Counterclockwise)
Preceding gene: 66046714
Following gene: 66046711
Centisome position: 68.17
GC content: 59.83
Gene sequence:
>468_bases ATGCCGCACAGCAATATTTCCCGAGCGCCGCGCCAGCATCTGACTGAACGTGTGCTGCAGGCCAAGACTGCGAAGAACCT GACCTGGGCGGGACTTGCAGAAGGTACGGGGTTGAGCGTGGTGTATGTCACCGCTGCATTGCTCGGGCAGCACCCTTTGC CGCAAGCGGTGGCCGAGGTGGTCGCCGAGCGTCTCGGACTGGACCGGGACGCGGTCGCCGAACTGCAAACCATCCCGTTG CGCGGCAATGTCGAAGACGTCTCCAGCGACCCGACCATCTACCGCTTCCATGAAATGGTTCAGGTCTACGGCACAACGCT GAAAGCACTGGTGCATGAGCAGTTCGGCGACGGCATCATCAGCGCAATCAACTTCAAGCTCGACATCAAGAAAGTCGACG ATCCGGAAGGGGGCGAGCGAGCCGTGATCACCCTCGATGGAAAATTCCTGCCCTACAAACCGTTCTGA
Upstream 100 bases:
>100_bases ATAAGTCAGGGTTATGGCGATGATCATAAATCAGTCTTGGATCTTATGGTGATAGTTGCCGATCCTGTGAGTGATGTGAA TTCATTCCGGAGGGTTACCT
Downstream 100 bases:
>100_bases GGACGCTGAGATGAGTGATAAAGGAAGACCGCCATTGCCACCCTTCACCCTGGAGACTGCAGTCCAGAAAGTCCGTGGCG CCGAGGATGGCTGGAATTCA
Product: cyanate hydratase
Products: NA
Alternate protein names: Cyanase; Cyanate hydrolase; Cyanate lyase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPHSNISRAPRQHLTERVLQAKTAKNLTWAGLAEGTGLSVVYVTAALLGQHPLPQAVAEVVAERLGLDRDAVAELQTIPL RGNVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIKKVDDPEGGERAVITLDGKFLPYKPF
Sequences:
>Translated_155_residues MPHSNISRAPRQHLTERVLQAKTAKNLTWAGLAEGTGLSVVYVTAALLGQHPLPQAVAEVVAERLGLDRDAVAELQTIPL RGNVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIKKVDDPEGGERAVITLDGKFLPYKPF >Mature_154_residues PHSNISRAPRQHLTERVLQAKTAKNLTWAGLAEGTGLSVVYVTAALLGQHPLPQAVAEVVAERLGLDRDAVAELQTIPLR GNVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIKKVDDPEGGERAVITLDGKFLPYKPF
Specific function: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide [H]
COG id: COG1513
COG function: function code P; Cyanate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyanase family [H]
Homologues:
Organism=Escherichia coli, GI1786535, Length=156, Percent_Identity=62.8205128205128, Blast_Score=202, Evalue=9e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008076 - InterPro: IPR003712 - InterPro: IPR010982 [H]
Pfam domain/function: PF02560 Cyanate_lyase [H]
EC number: =4.2.1.104 [H]
Molecular weight: Translated: 16971; Mature: 16839
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSNISRAPRQHLTERVLQAKTAKNLTWAGLAEGTGLSVVYVTAALLGQHPLPQAVAEV CCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHH VAERLGLDRDAVAELQTIPLRGNVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGII HHHHHCCCHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHE SAINFKLDIKKVDDPEGGERAVITLDGKFLPYKPF EHEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure PHSNISRAPRQHLTERVLQAKTAKNLTWAGLAEGTGLSVVYVTAALLGQHPLPQAVAEV CCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHH VAERLGLDRDAVAELQTIPLRGNVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGII HHHHHCCCHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHE SAINFKLDIKKVDDPEGGERAVITLDGKFLPYKPF EHEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA