Click here to switch to the map view.

The map label for this gene is flgH [H]

Identifier: 66046703

GI number: 66046703

Start: 4144839

End: 4145552

Strand: Reverse

Name: flgH [H]

Synonym: Psyr_3474

Alternate gene names: 66046703

Gene position: 4145552-4144839 (Counterclockwise)

Preceding gene: 66046704

Following gene: 66046702

Centisome position: 68.03

GC content: 59.1

Gene sequence:

>714_bases
ATGAACCGCCTTAGTGTTCCGCGTTTTTCAGTGTTGATCGCTTCATTGTGCGGGATCACCCTGCTGTCCGGCTGTGTTGC
GCCGACGGCCAAGCCCAATGACCCTTATTACGCTCCGGTGTTGCCGCGTACGCCCATGTCGGCGGCTGCCAACAATGGCG
CCATCTATCAGGCCGGTTTCGAGCAGAACCTGTACGGCGACCGCAAGGCCTTCCGTATTGGCGACATCATTACCATCACG
CTCTCCGAGCGTATGGCGGCGAGCAAGGCGGCCACGTCGGCAATGTCCAAGGACAGCACCAACAGCATTGGTCTGACCTC
GCTGTTCGGTTCGGGTCTGACCACCAACAACCCGATTGGCGGCAACGACCTGAGTCTGAATGCCGGTTACAACGGTGCGC
GGACCACCAAGGGTGATGGCAAGGCTGCACAGAGCAACAGTCTGACCGGTTCGGTCACCGTGACGGTTGCGGATGTGCTG
CCCAACGGCATTCTGGCGGTACGTGGTGAAAAGTGGATGACCCTCAATACCGGTGATGAACTGGTGCGGATTGCCGGCCT
GGTCCGGGCTGACGATATCGCCACCGACAACACTGTGTCATCTACCCGTATCGCTGATGCACGTATTACCTATTCGGGGA
CCGGAGCCTTTGCCGATACCAGCCAGCCAGGCTGGTTCGACCGGTTCTTCCTCAGCCCGTTGTTCCCTTTCTGA

Upstream 100 bases:

>100_bases
GACGCAGAACCTGTAAGGCCTTGATGTCGCTGCTCGTAGAACCGCTCAATCCGATGGGGCGCCTGATAAGCGCCTGTTAC
ACCGCGAGGTTTCAAGTGTC

Downstream 100 bases:

>100_bases
TAGCGGGATAGACATGATCAAGCTCAAGCAACTGATAGCGGCGACCTTGTTGTTGTCCACAGCGTTCGGCGTCCACGCCG
AGCGTCTGAAGGACATCGCG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNRLSVPRFSVLIASLCGITLLSGCVAPTAKPNDPYYAPVLPRTPMSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITIT
LSERMAASKAATSAMSKDSTNSIGLTSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVL
PNGILAVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGWFDRFFLSPLFPF

Sequences:

>Translated_237_residues
MNRLSVPRFSVLIASLCGITLLSGCVAPTAKPNDPYYAPVLPRTPMSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITIT
LSERMAASKAATSAMSKDSTNSIGLTSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVL
PNGILAVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGWFDRFFLSPLFPF
>Mature_237_residues
MNRLSVPRFSVLIASLCGITLLSGCVAPTAKPNDPYYAPVLPRTPMSAAANNGAIYQAGFEQNLYGDRKAFRIGDIITIT
LSERMAASKAATSAMSKDSTNSIGLTSLFGSGLTTNNPIGGNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVL
PNGILAVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGWFDRFFLSPLFPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=211, Percent_Identity=38.3886255924171, Blast_Score=110, Evalue=6e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24842; Mature: 24842

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLSVPRFSVLIASLCGITLLSGCVAPTAKPNDPYYAPVLPRTPMSAAANNGAIYQAGF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHCCCCCEEEECCC
EQNLYGDRKAFRIGDIITITLSERMAASKAATSAMSKDSTNSIGLTSLFGSGLTTNNPIG
CCCCCCCCCEEEECCEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCC
GNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGILAVRGEKWMTLNTGDE
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCEEEECCCEEEEECCCHH
LVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGWFDRFFLSPLFPF
HHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MNRLSVPRFSVLIASLCGITLLSGCVAPTAKPNDPYYAPVLPRTPMSAAANNGAIYQAGF
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHCCCCCEEEECCC
EQNLYGDRKAFRIGDIITITLSERMAASKAATSAMSKDSTNSIGLTSLFGSGLTTNNPIG
CCCCCCCCCEEEECCEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCC
GNDLSLNAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVLPNGILAVRGEKWMTLNTGDE
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCEEEECCCEEEEECCCHH
LVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFADTSQPGWFDRFFLSPLFPF
HHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA