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The map label for this gene is fliP [H]

Identifier: 66046673

GI number: 66046673

Start: 4108286

End: 4109038

Strand: Reverse

Name: fliP [H]

Synonym: Psyr_3444

Alternate gene names: 66046673

Gene position: 4109038-4108286 (Counterclockwise)

Preceding gene: 66046674

Following gene: 66046672

Centisome position: 67.43

GC content: 58.17

Gene sequence:

>753_bases
ATGGGCGCCTTGCGTTTCCTGATACTGCTGTTGCTGGTCATGGTGACGCCTGCTGCGCTGGCGGCCGATCCGCTGTCGAT
TCCGGCGATCACGCTGTCCAACGGTGCCGATGGTCAGCAGGAGTATTCGGTCAGCCTGCAGATTCTGCTGATCATGACCG
CGCTGAGCTTCATTCCGGCGTTTGTCATGTTGATGACCAGCTTCACGCGAATCATCATCGTCTTCTCGATCCTGCGTCAG
GCCCTCGGCCTGCAGCAGGCGCCGTCGAACCAGATCCTCACCGGCATGGCGCTGTTTCTGACCATGTTCATCATGGCCCC
TGTCTTCGACCGGGTGAATCAGGACGCCTTGCAGCCTTACCTGGCGGAGAAACTTTCCGCGCAGGATGCGGTGGCCAAGG
CGCAAGTGCCGATCAAGGACTTCATGCTGGCCCAGACGCGCACCAGCGATCTCGAGCTGTTCATGCGCCTGTCCAAGCGT
ACCGACATTCCGACCCCGGATGCCGCGCCATTGACTATTCTGGTTCCGGCGTTTGTGATTTCGGAACTCAAGACGGCGTT
TCAGATCGGCTTCATGATCTTCATTCCGTTTCTGATCATCGATCTGGTGGTGGCCAGTGTGCTGATGGCGATGGGTATGA
TGATGCTGTCGCCGCTGATCATTTCTCTGCCGTTCAAGATCATGCTGTTTGTGCTGGTGGACGGCTGGGCGCTGATTGTC
GGCACCCTGGCTGGCAGTTTTGGTGGCGTATGA

Upstream 100 bases:

>100_bases
TGCTCAAGGAGCCGGTGCAGGTGCCGGTGCGCGAGCAGGCCACCCCAGAATTCGCTCAGCGCCTGATGGAGCTGATGGGC
AAGGATAAGGACAAGAAGTG

Downstream 100 bases:

>100_bases
GCCGTTTTACTGAGGAGTCTGCCCGATGACGCCGGAAGTAGCCGTCGATCTGTTCCGCGAGGCGCTGTGGCTGACCACTG
TGCTGGTCGCGATTCTTGTG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MGALRFLILLLLVMVTPAALAADPLSIPAITLSNGADGQQEYSVSLQILLIMTALSFIPAFVMLMTSFTRIIIVFSILRQ
ALGLQQAPSNQILTGMALFLTMFIMAPVFDRVNQDALQPYLAEKLSAQDAVAKAQVPIKDFMLAQTRTSDLELFMRLSKR
TDIPTPDAAPLTILVPAFVISELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKIMLFVLVDGWALIV
GTLAGSFGGV

Sequences:

>Translated_250_residues
MGALRFLILLLLVMVTPAALAADPLSIPAITLSNGADGQQEYSVSLQILLIMTALSFIPAFVMLMTSFTRIIIVFSILRQ
ALGLQQAPSNQILTGMALFLTMFIMAPVFDRVNQDALQPYLAEKLSAQDAVAKAQVPIKDFMLAQTRTSDLELFMRLSKR
TDIPTPDAAPLTILVPAFVISELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKIMLFVLVDGWALIV
GTLAGSFGGV
>Mature_249_residues
GALRFLILLLLVMVTPAALAADPLSIPAITLSNGADGQQEYSVSLQILLIMTALSFIPAFVMLMTSFTRIIIVFSILRQA
LGLQQAPSNQILTGMALFLTMFIMAPVFDRVNQDALQPYLAEKLSAQDAVAKAQVPIKDFMLAQTRTSDLELFMRLSKRT
DIPTPDAAPLTILVPAFVISELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKIMLFVLVDGWALIVG
TLAGSFGGV

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=238, Percent_Identity=57.9831932773109, Blast_Score=266, Evalue=7e-73,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27143; Mature: 27012

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALRFLILLLLVMVTPAALAADPLSIPAITLSNGADGQQEYSVSLQILLIMTALSFIPA
CCHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
FVMLMTSFTRIIIVFSILRQALGLQQAPSNQILTGMALFLTMFIMAPVFDRVNQDALQPY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LAEKLSAQDAVAKAQVPIKDFMLAQTRTSDLELFMRLSKRTDIPTPDAAPLTILVPAFVI
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
SELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKIMLFVLVDGWALIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLAGSFGGV
HHHHHHCCCC
>Mature Secondary Structure 
GALRFLILLLLVMVTPAALAADPLSIPAITLSNGADGQQEYSVSLQILLIMTALSFIPA
CHHHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
FVMLMTSFTRIIIVFSILRQALGLQQAPSNQILTGMALFLTMFIMAPVFDRVNQDALQPY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LAEKLSAQDAVAKAQVPIKDFMLAQTRTSDLELFMRLSKRTDIPTPDAAPLTILVPAFVI
HHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
SELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKIMLFVLVDGWALIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLAGSFGGV
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]