| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ylxH [H]
Identifier: 66046667
GI number: 66046667
Start: 4101313
End: 4102146
Strand: Reverse
Name: ylxH [H]
Synonym: Psyr_3438
Alternate gene names: 66046667
Gene position: 4102146-4101313 (Counterclockwise)
Preceding gene: 66046668
Following gene: 66046666
Centisome position: 67.32
GC content: 61.51
Gene sequence:
>834_bases ATGGGCAGCATGCATCCCGTACAGGTTATCGCGGTGACCGGTGGCAAAGGTGGCGTCGGTAAGACTAACGTGTCAGTGAA CCTTTCACTGGCCCTCGCCGAGCTCGGCCGTCGCGTCATGCTGCTGGACGCCGATCTGGGTCTGGCCAATGTCGACGTGC TGCTTGGGTTGACGCCCAAGCGCACGCTTGCCGATGTCATCGAGGGGCGTTGTGAGTTGCGCGACGTGCTGTTGCAGGGG CCGGGCGGGGTTCGGATCGTACCCGCTGCGTCCGGCACCCAGAGCATGGTGCATCTGTCGCCCGCTCAGCATGCCGGCCT GATCCAGGCGTTCAGCGAGATTGGCGACAACCTCGATGTGCTGGTGATCGACACAGCCGCCGGTATTGGCGAGTCGGTGG TCAGCTTCGTGCGCGCCGCTCAGGAAGTGCTGCTGGTGGTGTGCGACGAGCCCACGTCGATCACCGATGCCTACGCCCTG ATCAAACTGCTCAACCGCGATTACGGCATGAACCGCTTCCGGGTGCTGGCCAACATGGCACAGAGCCCGCAGGAAGGGCG CAACCTGTTCGCCAAACTGACCAAAGTGACGGATCGTTTTCTCGATGTTGCGCTGCAGTATGTAGGTGCCGTGCCGTACG ACGAGTGCGTACGCAAGGCTGTACAGAAACAGCGCGCCGTTTACGAAGCATTCCCGCGTTCCAAATGTGCACTGGCCTTC AAGGCCATTGCCCAGAAGGTTGATACCTGGCCGTTGCCAGCCAACCCGCGGGGTCATCTCGAGTTCTTCGTTGAGCGACT CGTTCACCAGACCAGTGCAGGGCCTGTGCAATGA
Upstream 100 bases:
>100_bases GGAATGTCCCTGCGTCAACGGTCTGCCATGCGGTGTTCATTTGCGCACGTGCAGCCCTCGATGTGGTTTCGGTCTACGCA AGACAAGGTAAAGAAATAAC
Downstream 100 bases:
>100_bases CTGCGAGCGGCTACCAGATGTACAGCAAGACTTCCCGTAATTCACAATACGAGTTGATCGAGCGCTATGCGCCCTTGGTC AAGCGTATCGCTTATCATCT
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MGSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPKRTLADVIEGRCELRDVLLQG PGGVRIVPAASGTQSMVHLSPAQHAGLIQAFSEIGDNLDVLVIDTAAGIGESVVSFVRAAQEVLLVVCDEPTSITDAYAL IKLLNRDYGMNRFRVLANMAQSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDECVRKAVQKQRAVYEAFPRSKCALAF KAIAQKVDTWPLPANPRGHLEFFVERLVHQTSAGPVQ
Sequences:
>Translated_277_residues MGSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPKRTLADVIEGRCELRDVLLQG PGGVRIVPAASGTQSMVHLSPAQHAGLIQAFSEIGDNLDVLVIDTAAGIGESVVSFVRAAQEVLLVVCDEPTSITDAYAL IKLLNRDYGMNRFRVLANMAQSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDECVRKAVQKQRAVYEAFPRSKCALAF KAIAQKVDTWPLPANPRGHLEFFVERLVHQTSAGPVQ >Mature_276_residues GSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPKRTLADVIEGRCELRDVLLQGP GGVRIVPAASGTQSMVHLSPAQHAGLIQAFSEIGDNLDVLVIDTAAGIGESVVSFVRAAQEVLLVVCDEPTSITDAYALI KLLNRDYGMNRFRVLANMAQSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDECVRKAVQKQRAVYEAFPRSKCALAFK AIAQKVDTWPLPANPRGHLEFFVERLVHQTSAGPVQ
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=227, Percent_Identity=25.9911894273128, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29752; Mature: 29621
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPK CCCCCCEEEEEEECCCCCCCCCEEEEEEEEEHHHHCCEEEEEECCCCCCCCHHEEECCCH RTLADVIEGRCELRDVLLQGPGGVRIVPAASGTQSMVHLSPAQHAGLIQAFSEIGDNLDV HHHHHHHHCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCCEE LVIDTAAGIGESVVSFVRAAQEVLLVVCDEPTSITDAYALIKLLNRDYGMNRFRVLANMA EEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH QSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDECVRKAVQKQRAVYEAFPRSKCALAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH KAIAQKVDTWPLPANPRGHLEFFVERLVHQTSAGPVQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPK CCCCCEEEEEEECCCCCCCCCEEEEEEEEEHHHHCCEEEEEECCCCCCCCHHEEECCCH RTLADVIEGRCELRDVLLQGPGGVRIVPAASGTQSMVHLSPAQHAGLIQAFSEIGDNLDV HHHHHHHHCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHCCCCEE LVIDTAAGIGESVVSFVRAAQEVLLVVCDEPTSITDAYALIKLLNRDYGMNRFRVLANMA EEEECCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH QSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDECVRKAVQKQRAVYEAFPRSKCALAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH KAIAQKVDTWPLPANPRGHLEFFVERLVHQTSAGPVQ HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]