| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cheZ [H]
Identifier: 66046664
GI number: 66046664
Start: 4099140
End: 4099925
Strand: Reverse
Name: cheZ [H]
Synonym: Psyr_3435
Alternate gene names: 66046664
Gene position: 4099925-4099140 (Counterclockwise)
Preceding gene: 66046665
Following gene: 66046663
Centisome position: 67.28
GC content: 53.82
Gene sequence:
>786_bases ATGGATAACAATGATTCGATGGCCGACTTTGAGTCGACCTTAAAAAGACACGCGCAGGAACTTGTCACCAGCCTTGAAAA GGGTCGTTTTGGTGACGCTGTGCAACTGATCCACGAACTCAATCAGACACGCGACCGCGGCCTTTATCAGGAAGTGGGCA AGCTGACTCGTGAGCTGCACAGTGCAATCGTAAACTTTCACATTGATCCGCACATGCCTCAAGCCGAGGAAGTGTCGCAG ATCACGGATGCTACCGAACGCCTGTCGTATGTGGTGAGGCTGACCGAGAATGCGGCCAACCGCACCATGGACCTGGTGGA GGAGAGTACGCCGGTCATGAACGGCCTGAGTTCCGACGCCAAGGCGTTGAGCGACGACTGGGGACGTTTCATGCGCCGCG AAATCGGTGCCGAAGAGTTCCGCGAGCTGGCCAAGCGGGTCGATGGTTTTCTGACGCGTACCGAGAAGGAAACCCATCAG GTTTCCGCACATCTGAATGACATTCTGCTCGCCCAGGATTACCAGGACCTTACCGGTCAGGTCATCAAGCGTGTGACGCA ACTGGTCACTGAAGTCGAGAGCAATCTGCTCAAACTGGTGCTCATGGCCAGTCATGTCGATCGCTTCGCAGGCATCGAAC ATGACGAACAATCCATCCTCAATGAAAAAGATCCTAAAAAACATCTCGCTCAGGGTGAAGGTCCGCAGATTCATGCCGAT AAACGTGAAGACGTCGTATCCGGACAGGATGATGTAGACGATCTGCTATCGAGCCTCGGCTTCTAA
Upstream 100 bases:
>100_bases AACGGCTATGTAGTCAAGCCATTCACTGCCCAAGCCCTGAAAGACAAGATCGACAAGATCTTTGAACGCGTCAATAGCTG ATGCAAGCCGCGAGGGCGCT
Downstream 100 bases:
>100_bases GGTCTGTTGACGGTTAATTTTAGGGAGCACCCCATGAGCTTCGGCGCCGATGAAGAAATCCTTCAGGATTTTCTGGTAGA GGCCGGCGAAATTCTGGAGC
Product: chemotaxis phosphatase, CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MDNNDSMADFESTLKRHAQELVTSLEKGRFGDAVQLIHELNQTRDRGLYQEVGKLTRELHSAIVNFHIDPHMPQAEEVSQ ITDATERLSYVVRLTENAANRTMDLVEESTPVMNGLSSDAKALSDDWGRFMRREIGAEEFRELAKRVDGFLTRTEKETHQ VSAHLNDILLAQDYQDLTGQVIKRVTQLVTEVESNLLKLVLMASHVDRFAGIEHDEQSILNEKDPKKHLAQGEGPQIHAD KREDVVSGQDDVDDLLSSLGF
Sequences:
>Translated_261_residues MDNNDSMADFESTLKRHAQELVTSLEKGRFGDAVQLIHELNQTRDRGLYQEVGKLTRELHSAIVNFHIDPHMPQAEEVSQ ITDATERLSYVVRLTENAANRTMDLVEESTPVMNGLSSDAKALSDDWGRFMRREIGAEEFRELAKRVDGFLTRTEKETHQ VSAHLNDILLAQDYQDLTGQVIKRVTQLVTEVESNLLKLVLMASHVDRFAGIEHDEQSILNEKDPKKHLAQGEGPQIHAD KREDVVSGQDDVDDLLSSLGF >Mature_261_residues MDNNDSMADFESTLKRHAQELVTSLEKGRFGDAVQLIHELNQTRDRGLYQEVGKLTRELHSAIVNFHIDPHMPQAEEVSQ ITDATERLSYVVRLTENAANRTMDLVEESTPVMNGLSSDAKALSDDWGRFMRREIGAEEFRELAKRVDGFLTRTEKETHQ VSAHLNDILLAQDYQDLTGQVIKRVTQLVTEVESNLLKLVLMASHVDRFAGIEHDEQSILNEKDPKKHLAQGEGPQIHAD KREDVVSGQDDVDDLLSSLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=210, Percent_Identity=37.6190476190476, Blast_Score=113, Evalue=2e-26,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 29501; Mature: 29501
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNDSMADFESTLKRHAQELVTSLEKGRFGDAVQLIHELNQTRDRGLYQEVGKLTRELH CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH SAIVNFHIDPHMPQAEEVSQITDATERLSYVVRLTENAANRTMDLVEESTPVMNGLSSDA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KALSDDWGRFMRREIGAEEFRELAKRVDGFLTRTEKETHQVSAHLNDILLAQDYQDLTGQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIKRVTQLVTEVESNLLKLVLMASHVDRFAGIEHDEQSILNEKDPKKHLAQGEGPQIHAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCCCC KREDVVSGQDDVDDLLSSLGF CHHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure MDNNDSMADFESTLKRHAQELVTSLEKGRFGDAVQLIHELNQTRDRGLYQEVGKLTRELH CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH SAIVNFHIDPHMPQAEEVSQITDATERLSYVVRLTENAANRTMDLVEESTPVMNGLSSDA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH KALSDDWGRFMRREIGAEEFRELAKRVDGFLTRTEKETHQVSAHLNDILLAQDYQDLTGQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIKRVTQLVTEVESNLLKLVLMASHVDRFAGIEHDEQSILNEKDPKKHLAQGEGPQIHAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCCCC KREDVVSGQDDVDDLLSSLGF CHHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7860605; 10052136; 10984043 [H]