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The map label for this gene is stbB [H]

Identifier: 66046647

GI number: 66046647

Start: 4081543

End: 4081995

Strand: Direct

Name: stbB [H]

Synonym: Psyr_3418

Alternate gene names: 66046647

Gene position: 4081543-4081995 (Clockwise)

Preceding gene: 66046646

Following gene: 66046648

Centisome position: 66.98

GC content: 58.06

Gene sequence:

>453_bases
ATGTTCCTGCTCGACACCAACGTGGTTTCAGAGCTCAGAAAGCGCACTGCAGACGCCAATGTGCTGCGCTGGTCGCGAAC
ACAAATGGCCTCCAGCCTGTTCATCTCGTCCATCACGATTCTTGAACTCGAAACAGGTATCCTGCGCATCGAACGCCGCG
ACCCGACACAAGGCGCAATATTGCGAATGTGGCTCGACCAGCATGTATTGAAGGCGTTCGCCGGGCGTATCCTGACCGTC
GACATTCAGGTCGCTAGGCGCTGCGCGCAATTGCACGTTCCCGACCCGCGCAGCGAATGCGATGCGTTGATCGCCGCCAC
TGCGCTGGTGCATGGCATGACCGTGGTCACACGCAACACAATGGACTTTCAGTCGTGCGGGGTCGCGCTGCTCAATCCCT
GGGTCAGCCAGTTGAATGAAGAAGCGGCCGTTTATTCACGTGCAGCACGTTGA

Upstream 100 bases:

>100_bases
CGGCAAGCATCGCCGACATGCTGATAATGCCCACTGACATCGATATCGAGTTCGAGCCTCAGCGCGCCGTGATCACGCCT
CGACAGGTTGATCTGTCCTG

Downstream 100 bases:

>100_bases
ACGCGGATGTGAACCTGCCTGACCGGTATCGGCCGGGGTCAGGCTACCGCCACTGGACTCATCGATGACCAAGCAGATTC
CAGTACACGACATCACCCCG

Product: PilT protein, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MFLLDTNVVSELRKRTADANVLRWSRTQMASSLFISSITILELETGILRIERRDPTQGAILRMWLDQHVLKAFAGRILTV
DIQVARRCAQLHVPDPRSECDALIAATALVHGMTVVTRNTMDFQSCGVALLNPWVSQLNEEAAVYSRAAR

Sequences:

>Translated_150_residues
MFLLDTNVVSELRKRTADANVLRWSRTQMASSLFISSITILELETGILRIERRDPTQGAILRMWLDQHVLKAFAGRILTV
DIQVARRCAQLHVPDPRSECDALIAATALVHGMTVVTRNTMDFQSCGVALLNPWVSQLNEEAAVYSRAAR
>Mature_150_residues
MFLLDTNVVSELRKRTADANVLRWSRTQMASSLFISSITILELETGILRIERRDPTQGAILRMWLDQHVLKAFAGRILTV
DIQVARRCAQLHVPDPRSECDALIAATALVHGMTVVTRNTMDFQSCGVALLNPWVSQLNEEAAVYSRAAR

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 16806; Mature: 16806

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLDTNVVSELRKRTADANVLRWSRTQMASSLFISSITILELETGILRIERRDPTQGAI
CEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCHHH
LRMWLDQHVLKAFAGRILTVDIQVARRCAQLHVPDPRSECDALIAATALVHGMTVVTRNT
HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECC
MDFQSCGVALLNPWVSQLNEEAAVYSRAAR
CCHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLLDTNVVSELRKRTADANVLRWSRTQMASSLFISSITILELETGILRIERRDPTQGAI
CEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCHHH
LRMWLDQHVLKAFAGRILTVDIQVARRCAQLHVPDPRSECDALIAATALVHGMTVVTRNT
HHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEECC
MDFQSCGVALLNPWVSQLNEEAAVYSRAAR
CCHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]