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The map label for this gene is 66046645

Identifier: 66046645

GI number: 66046645

Start: 4080189

End: 4081166

Strand: Direct

Name: 66046645

Synonym: Psyr_3416

Alternate gene names: NA

Gene position: 4080189-4081166 (Clockwise)

Preceding gene: 66046644

Following gene: 66046646

Centisome position: 66.96

GC content: 61.86

Gene sequence:

>978_bases
ATGAGTACGTTCTGGAGCCTGTACATCGCGGTCCTGACCCTGGGCACCATCATCGCCATGCTCTGGCTGCTGCTGTCCAC
ACGCAAAGGTCAGCCCGACGAACCGACAGATGAAACCGTCGGCCATACGTTCGACGGTATCGAGGAATACGACAACCCGC
TGCCCAGATGGTGGTTCTATCTGTTCCTGGCGACCATCGTCTTTGCACTGGGCTATCTGCTCCTGTACCCGGGGCTGGGC
AACTGGCAGGGGTTGCTGCCCGGTTATGAATACCGGGACCAGGACAGCAAGACGCAATTCTCCGACGGCCAGCAAGGCTG
GACCAGTGTCCATGAATGGGAGCGGGAAGTCGCAAACGCCGAGGCCCGTTACGGGCCGCTGTTTGCCAGGTACGCGGCCA
TGCCCGTCGAGGAAGTGGCCAAAGACCCCCAGGCGTTGAAAATCGGTGCACGTCTGTTCGCGTCCAACTGCTCGGTCTGC
CACGGCTCTGACGCGAAAGGCGCCTATGGCTTTCCCAACCTGACCGATGCCGACTGGCGCTGGGGCGGCGATGCCCAGTC
GATCAAGACCTCCATTCTTGCAGGCCGTATGGGCGTGATGCCGGCCCTGGGCGGCGTGCTCGGCGAACAGGATGTTCGCG
ATGTGGCGGCCTACGTGCTGACGCAGCTGGACGCGCGCGCACTACCGGAGGATGCCAAGGCTGACCCGGTGGCCGGACAG
AAGACCTTCGCCAGCCTGTGCGTGGCCTGTCATGGTCCAGAGGGCAAGGGAATGCCGATTCTCGGCGCACCGGATCTGAC
CCACCCCAACGCGTTTATTTACGGTTCCAGCTACGCTCAGTTGCAGCAGACCATACGTGATGGCCGCCAGGGCCAGATGC
CTGCTCAGCAAGCACTGCAAGGCAATGACCGGGTTCACATTCTGGCTGCCTATGTTTACAGCCTGTCCCGCCAGGAGCAG
CCTGCTGAATCCAGATGA

Upstream 100 bases:

>100_bases
GCAAGGCAGACTTCGACGACGCGACCCTGCTGCCTTTCGCGGATGACCCCGAGGCCATCGGCAAGGTCGAAACTGCCAGG
GCTGAACGGGAAGGCCGGTC

Downstream 100 bases:

>100_bases
CAGGGCTCCGCTCAGTCCATGGTTGTTGCAGTCTGAAACAACAAATTCTTTGTAGTTACATCTCTACATGACTAGACTCG
CTCACGACCACAATACGCTG

Product: cytochrome c oxidase cbb3-type, subunit III

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit III; Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome C Class I; Cytochrome C Oxidase Subunit CcoP; Cytochrome-C Oxidase FixP Chain; Cytochrome C; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase Subunit III; Cytochrome C Mono- And Diheme Variant; Cytochrome C Subfamily; Cytochrome C Oxidase CcoP Subunit; FixP2 Diheme C-Type Cytochrome; Class I Cytochrome C; Cytochrome C Mono- And Diheme Variants; FixP Protein; Cytochrome Oxidase Component Cytochrome C Protein; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; FixP3 Cytochrome C Oxidase Membrane Anchored Subunit; Gluconate 2-Dehydrogenase; Cytochrome Cbb3 Oxidase Diheme Subunit Membrane-Bound CcoP; Cbb3-Type Cytochrome C Oxidase Subunit CcoP; Cytochrome C Oxidase; Membrane-Anchored Cbb3 Cytochrome Oxidase Subunit; Cytochrome C Oxidase Transmembrane Protein; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome C Oxidase Protein FixP Chain; Cbb3 Oxidase Subunit III; Cytochrome C Oxidase FixP Chain Protein; Diheme Cytochrome C

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSTFWSLYIAVLTLGTIIAMLWLLLSTRKGQPDEPTDETVGHTFDGIEEYDNPLPRWWFYLFLATIVFALGYLLLYPGLG
NWQGLLPGYEYRDQDSKTQFSDGQQGWTSVHEWEREVANAEARYGPLFARYAAMPVEEVAKDPQALKIGARLFASNCSVC
HGSDAKGAYGFPNLTDADWRWGGDAQSIKTSILAGRMGVMPALGGVLGEQDVRDVAAYVLTQLDARALPEDAKADPVAGQ
KTFASLCVACHGPEGKGMPILGAPDLTHPNAFIYGSSYAQLQQTIRDGRQGQMPAQQALQGNDRVHILAAYVYSLSRQEQ
PAESR

Sequences:

>Translated_325_residues
MSTFWSLYIAVLTLGTIIAMLWLLLSTRKGQPDEPTDETVGHTFDGIEEYDNPLPRWWFYLFLATIVFALGYLLLYPGLG
NWQGLLPGYEYRDQDSKTQFSDGQQGWTSVHEWEREVANAEARYGPLFARYAAMPVEEVAKDPQALKIGARLFASNCSVC
HGSDAKGAYGFPNLTDADWRWGGDAQSIKTSILAGRMGVMPALGGVLGEQDVRDVAAYVLTQLDARALPEDAKADPVAGQ
KTFASLCVACHGPEGKGMPILGAPDLTHPNAFIYGSSYAQLQQTIRDGRQGQMPAQQALQGNDRVHILAAYVYSLSRQEQ
PAESR
>Mature_324_residues
STFWSLYIAVLTLGTIIAMLWLLLSTRKGQPDEPTDETVGHTFDGIEEYDNPLPRWWFYLFLATIVFALGYLLLYPGLGN
WQGLLPGYEYRDQDSKTQFSDGQQGWTSVHEWEREVANAEARYGPLFARYAAMPVEEVAKDPQALKIGARLFASNCSVCH
GSDAKGAYGFPNLTDADWRWGGDAQSIKTSILAGRMGVMPALGGVLGEQDVRDVAAYVLTQLDARALPEDAKADPVAGQK
TFASLCVACHGPEGKGMPILGAPDLTHPNAFIYGSSYAQLQQTIRDGRQGQMPAQQALQGNDRVHILAAYVYSLSRQEQP
AESR

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 35714; Mature: 35582

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFWSLYIAVLTLGTIIAMLWLLLSTRKGQPDEPTDETVGHTFDGIEEYDNPLPRWWFY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHCCCHHHHHHH
LFLATIVFALGYLLLYPGLGNWQGLLPGYEYRDQDSKTQFSDGQQGWTSVHEWEREVANA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
EARYGPLFARYAAMPVEEVAKDPQALKIGARLFASNCSVCHGSDAKGAYGFPNLTDADWR
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCC
WGGDAQSIKTSILAGRMGVMPALGGVLGEQDVRDVAAYVLTQLDARALPEDAKADPVAGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
KTFASLCVACHGPEGKGMPILGAPDLTHPNAFIYGSSYAQLQQTIRDGRQGQMPAQQALQ
HHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHC
GNDRVHILAAYVYSLSRQEQPAESR
CCCCEEHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STFWSLYIAVLTLGTIIAMLWLLLSTRKGQPDEPTDETVGHTFDGIEEYDNPLPRWWFY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHCCCHHHHHHH
LFLATIVFALGYLLLYPGLGNWQGLLPGYEYRDQDSKTQFSDGQQGWTSVHEWEREVANA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
EARYGPLFARYAAMPVEEVAKDPQALKIGARLFASNCSVCHGSDAKGAYGFPNLTDADWR
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCC
WGGDAQSIKTSILAGRMGVMPALGGVLGEQDVRDVAAYVLTQLDARALPEDAKADPVAGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
KTFASLCVACHGPEGKGMPILGAPDLTHPNAFIYGSSYAQLQQTIRDGRQGQMPAQQALQ
HHHHHHHHHHCCCCCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHC
GNDRVHILAAYVYSLSRQEQPAESR
CCCCEEHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA