Click here to switch to the map view.

The map label for this gene is 66046640

Identifier: 66046640

GI number: 66046640

Start: 4076126

End: 4076584

Strand: Direct

Name: 66046640

Synonym: Psyr_3411

Alternate gene names: NA

Gene position: 4076126-4076584 (Clockwise)

Preceding gene: 66046639

Following gene: 66046642

Centisome position: 66.89

GC content: 57.73

Gene sequence:

>459_bases
ATGCATCGTCCGCCTCCCTCACCCCTGCGTTGCGTTCACACTGCTGTCCATGAAGGCCGTTTTGCCGCCAGCATCAACAC
GCAACCCTTCAAGACCTCCTCTCTGACAGGCAGACTGACCCTGCGATCGGAACTGGAACGGGCCCCTGCTCAATGGATAT
GGCAGGTTATCGCCGACGGCAAGGTGGGCAACAGGCGAGCCACCCTCGGCTTGTTCCTGGATCGCGATCTTGAGCCCGGC
GACCACGACCTGATCGATCATGAGCAGATCAAGGTGATCTACAACGAAACGCTGCACCGGAAGAACACCGTCTACCACTC
GGCGCATTTCCAGGGCGGCCGGCTGGTTCTGCTTGAAGGCAGTCCCTGCACACTGCGGATAAGAGGCTTATTCAGTTTCA
ATATGTCATCAATCAACCTGGATGTGACCGACGGCGCTTTCGACCTGTATTGCCGGTGA

Upstream 100 bases:

>100_bases
CAGATGATCGATTGCTGAAACCCGTTGATCATCCGGCAGGGCGTTGCGCTAAAGGTGTAACGCCCTGTCGCCGTTTTCAG
GAGCTTCTCAGGTTCAGTCC

Downstream 100 bases:

>100_bases
CTCAGGTGCGCAGGAACCCGGCAATCTCTCTCGCGGAGTCAGCCAGGCATTGCTCGTGGCTGATGCCCGCGACCTTCAAT
GGTTTGAGGTCATGATTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MHRPPPSPLRCVHTAVHEGRFAASINTQPFKTSSLTGRLTLRSELERAPAQWIWQVIADGKVGNRRATLGLFLDRDLEPG
DHDLIDHEQIKVIYNETLHRKNTVYHSAHFQGGRLVLLEGSPCTLRIRGLFSFNMSSINLDVTDGAFDLYCR

Sequences:

>Translated_152_residues
MHRPPPSPLRCVHTAVHEGRFAASINTQPFKTSSLTGRLTLRSELERAPAQWIWQVIADGKVGNRRATLGLFLDRDLEPG
DHDLIDHEQIKVIYNETLHRKNTVYHSAHFQGGRLVLLEGSPCTLRIRGLFSFNMSSINLDVTDGAFDLYCR
>Mature_152_residues
MHRPPPSPLRCVHTAVHEGRFAASINTQPFKTSSLTGRLTLRSELERAPAQWIWQVIADGKVGNRRATLGLFLDRDLEPG
DHDLIDHEQIKVIYNETLHRKNTVYHSAHFQGGRLVLLEGSPCTLRIRGLFSFNMSSINLDVTDGAFDLYCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17205; Mature: 17205

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRPPPSPLRCVHTAVHEGRFAASINTQPFKTSSLTGRLTLRSELERAPAQWIWQVIADG
CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCC
KVGNRRATLGLFLDRDLEPGDHDLIDHEQIKVIYNETLHRKNTVYHSAHFQGGRLVLLEG
CCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEECCCCEEEEEEC
SPCTLRIRGLFSFNMSSINLDVTDGAFDLYCR
CCCEEEEEEEEEECCEEEEEEEECCEEEEEEC
>Mature Secondary Structure
MHRPPPSPLRCVHTAVHEGRFAASINTQPFKTSSLTGRLTLRSELERAPAQWIWQVIADG
CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCC
KVGNRRATLGLFLDRDLEPGDHDLIDHEQIKVIYNETLHRKNTVYHSAHFQGGRLVLLEG
CCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEECCCCEEEEEEC
SPCTLRIRGLFSFNMSSINLDVTDGAFDLYCR
CCCEEEEEEEEEECCEEEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA