Click here to switch to the map view.

The map label for this gene is ooxB [H]

Identifier: 66046629

GI number: 66046629

Start: 4056800

End: 4057984

Strand: Direct

Name: ooxB [H]

Synonym: Psyr_3400

Alternate gene names: 66046629

Gene position: 4056800-4057984 (Clockwise)

Preceding gene: 66046628

Following gene: 66046630

Centisome position: 66.57

GC content: 61.01

Gene sequence:

>1185_bases
ATGACCCCACAAAAAAGCGATGTCCTGATTATCGGCGGCGGCTTCATGGGCGCATCCTCCGCGTTTTTTCTGCGCCAGCA
CGGCCGTTCGGTCACCCTGCTGGAGCGCGACCAGATCGGCCAATATGCCAGCGGCGTGAATTTCGGCAACGTGCGCCGTC
AGGGACGGTTTCTCGGCCAACTGGAACTGTCCAATCGCTCCTGGGCACTGTGGAAGCGCCTGCCGGAGCTGATCGGCGAA
GACCTGGAATTCATTCCCAGCGGGCACATGCGCGTTTGCTATCGCGAAGACGAAATCGCCGAACTGGAAGCCTATGCCGC
CGCCCCGGAAGCCCGCGAGCTGGACTTGCAGATCCTTTCCGGCAAGGCGCTGCACGACCGTTTTCCGTTTCTCGGTACAC
AAGTCAAAGGCGGTTCCTATGCGCCCCATGACGGGCACGCCAACCCAAGGCTGGCAGCCCCCGCGTTCGCCCGTGCGGCG
ATTCGTGCAGGTGCAAGAATCGAAGAACGCACTGAAGTGACCGAGGTGCAAAAGGTGGGCGGCGAGTTTCAGGTCACCAC
CGCCGATGGACAGCTATTCGTCGCCGAACAGTTGCTCATCACTGCCGGTGCCTGGGGCGCCAGGCTCGCCGAGCAGTTCG
GCGAGTCTGTCCCTCTTGAGCCCAACGGACCGCAGATGTCGGTGACAGAACCGGTGCCTTACGCGCTGCCGACGGTGATC
GGGGTGTTTACCAGGATCAAGGAAGAAGTGATCTATTTCCGGCAGATCCCGCGCGGCAACATCATCATCGGGGGTGGCAA
TCGCAATAAGCCGGACATGCTCAACCGCCGCGCCTACTTCAAGCCGGAGAGCCTGATCAACCAGATGAAACAGATGAAAC
GCCTGCTACCGGGCGCAGAAAAGCTGAACATCATCCGCGTCTGGAGCGGCATCGAGAGTTACACGCCGGACTCGCTACCG
ATCATGGGCCGCAGCGGCAAGGTCGACGGCCTGTTCTATGCGTTTGGCTTCTGCGGCCATGGTTTTCAGCTTGGTCCCGG
CGTCGGTGACGTCATGGCCGAGCTGATCAGCACCGGCAGCACGCGCACGTTGATCAGCCCGTTCGATATTCGCCGCTTCA
CCGATCCGACCGCCATCGAAATGCCGCTCATGTCCAGCCTGATGAGCACCGGAAAGCTGGTATGA

Upstream 100 bases:

>100_bases
GCGCGCGCGGTGGTGCCGGTCCCGGAATTGCACCACGGTTACCTGATCGAGATCGAAGCCCTGGCGCGTTGTAGCCAATC
AACATGACCGGGAGCCCCTC

Downstream 100 bases:

>100_bases
GCCCAACCACTCACCCACCTCATCGCAACGGAGGCGCCATGCCTGCAACCCCAGACGCTCACTACCAGTATCGCCCGGTG
ACTGCGGCGGATATCCCGGC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Octopine oxidase subunit B [H]

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTPQKSDVLIIGGGFMGASSAFFLRQHGRSVTLLERDQIGQYASGVNFGNVRRQGRFLGQLELSNRSWALWKRLPELIGE
DLEFIPSGHMRVCYREDEIAELEAYAAAPEARELDLQILSGKALHDRFPFLGTQVKGGSYAPHDGHANPRLAAPAFARAA
IRAGARIEERTEVTEVQKVGGEFQVTTADGQLFVAEQLLITAGAWGARLAEQFGESVPLEPNGPQMSVTEPVPYALPTVI
GVFTRIKEEVIYFRQIPRGNIIIGGGNRNKPDMLNRRAYFKPESLINQMKQMKRLLPGAEKLNIIRVWSGIESYTPDSLP
IMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGSTRTLISPFDIRRFTDPTAIEMPLMSSLMSTGKLV

Sequences:

>Translated_394_residues
MTPQKSDVLIIGGGFMGASSAFFLRQHGRSVTLLERDQIGQYASGVNFGNVRRQGRFLGQLELSNRSWALWKRLPELIGE
DLEFIPSGHMRVCYREDEIAELEAYAAAPEARELDLQILSGKALHDRFPFLGTQVKGGSYAPHDGHANPRLAAPAFARAA
IRAGARIEERTEVTEVQKVGGEFQVTTADGQLFVAEQLLITAGAWGARLAEQFGESVPLEPNGPQMSVTEPVPYALPTVI
GVFTRIKEEVIYFRQIPRGNIIIGGGNRNKPDMLNRRAYFKPESLINQMKQMKRLLPGAEKLNIIRVWSGIESYTPDSLP
IMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGSTRTLISPFDIRRFTDPTAIEMPLMSSLMSTGKLV
>Mature_393_residues
TPQKSDVLIIGGGFMGASSAFFLRQHGRSVTLLERDQIGQYASGVNFGNVRRQGRFLGQLELSNRSWALWKRLPELIGED
LEFIPSGHMRVCYREDEIAELEAYAAAPEARELDLQILSGKALHDRFPFLGTQVKGGSYAPHDGHANPRLAAPAFARAAI
RAGARIEERTEVTEVQKVGGEFQVTTADGQLFVAEQLLITAGAWGARLAEQFGESVPLEPNGPQMSVTEPVPYALPTVIG
VFTRIKEEVIYFRQIPRGNIIIGGGNRNKPDMLNRRAYFKPESLINQMKQMKRLLPGAEKLNIIRVWSGIESYTPDSLPI
MGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGSTRTLISPFDIRRFTDPTAIEMPLMSSLMSTGKLV

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI197927446, Length=399, Percent_Identity=25.31328320802, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI21361378, Length=399, Percent_Identity=25.31328320802, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI194306651, Length=387, Percent_Identity=24.5478036175711, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI24797151, Length=388, Percent_Identity=25, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI8923708, Length=429, Percent_Identity=25.4079254079254, Blast_Score=76, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71994045, Length=391, Percent_Identity=22.5063938618926, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994052, Length=398, Percent_Identity=22.3618090452261, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI20130091, Length=391, Percent_Identity=27.8772378516624, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI28571104, Length=387, Percent_Identity=25.8397932816537, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI20129729, Length=403, Percent_Identity=26.7990074441687, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43328; Mature: 43197

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQKSDVLIIGGGFMGASSAFFLRQHGRSVTLLERDQIGQYASGVNFGNVRRQGRFLGQ
CCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEEHHHCCHHHCCCCCHHHHHCCCEEEE
LELSNRSWALWKRLPELIGEDLEFIPSGHMRVCYREDEIAELEAYAAAPEARELDLQILS
EEECCCCHHHHHHHHHHHCCCHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCEEEEEC
GKALHDRFPFLGTQVKGGSYAPHDGHANPRLAAPAFARAAIRAGARIEERTEVTEVQKVG
CCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
GEFQVTTADGQLFVAEQLLITAGAWGARLAEQFGESVPLEPNGPQMSVTEPVPYALPTVI
CCEEEEECCCCEEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHH
GVFTRIKEEVIYFRQIPRGNIIIGGGNRNKPDMLNRRAYFKPESLINQMKQMKRLLPGAE
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCH
KLNIIRVWSGIESYTPDSLPIMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGS
HEEEEEEECCHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
TRTLISPFDIRRFTDPTAIEMPLMSSLMSTGKLV
CEEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPQKSDVLIIGGGFMGASSAFFLRQHGRSVTLLERDQIGQYASGVNFGNVRRQGRFLGQ
CCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEEHHHCCHHHCCCCCHHHHHCCCEEEE
LELSNRSWALWKRLPELIGEDLEFIPSGHMRVCYREDEIAELEAYAAAPEARELDLQILS
EEECCCCHHHHHHHHHHHCCCHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCEEEEEC
GKALHDRFPFLGTQVKGGSYAPHDGHANPRLAAPAFARAAIRAGARIEERTEVTEVQKVG
CCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
GEFQVTTADGQLFVAEQLLITAGAWGARLAEQFGESVPLEPNGPQMSVTEPVPYALPTVI
CCEEEEECCCCEEEEEHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHH
GVFTRIKEEVIYFRQIPRGNIIIGGGNRNKPDMLNRRAYFKPESLINQMKQMKRLLPGAE
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCH
KLNIIRVWSGIESYTPDSLPIMGRSGKVDGLFYAFGFCGHGFQLGPGVGDVMAELISTGS
HEEEEEEECCHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
TRTLISPFDIRRFTDPTAIEMPLMSSLMSTGKLV
CEEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]