| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is aaeB [H]
Identifier: 66046607
GI number: 66046607
Start: 4036675
End: 4038762
Strand: Direct
Name: aaeB [H]
Synonym: Psyr_3378
Alternate gene names: 66046607
Gene position: 4036675-4038762 (Clockwise)
Preceding gene: 66046606
Following gene: 66046608
Centisome position: 66.24
GC content: 62.36
Gene sequence:
>2088_bases TTGAACGGATTTTTCTCCAGCGTTCCACCTGCACGCGACTGGTTCTACGGTGTGCGCACCTTCGGCGCATCAATGCTGGC GCTGTACATCGCATTGTTGATGGAAATGCCCCGCCCCTACTGGGCAATGGCCACGGTGTACATCGTCTCCAGCCCCTTCG TCGGCCCGACCAGCTCCAAGGCCCTGTACAGAGCCGCCGGAACCCTGGCCGGTGCCGCAGCATCGGTGGTGCTGGTGCCC ATGTTCGTGCAGACGCCCTTGTTGCTGGCCATCGTGGTCGGGCTGTGGACGGGCACCCTGTTGTTTCTGTCCCTGCACTT GCGCACCGCCAACAGCTACGCATTGATGCTGGCCGGCTACACCATGCCGCTGATTTCGCTGCCGGTGGTCGACAACCCGC AGGCTGTTTTCGACATCGCGGTGTCGCGTACCGAAGAGATTTTTCTCGGCATCATCTGCGCCGCTGTCGTGGGTGCGATG TTCTGGCCCAGACGCCTGGCACCGGTGTTTCAGGCCACCACGGAAAAGTGGTTCAGTGACGCCGCGACTTACAGTCAGCG CTTTATCAGCCGCACCTGTCAGCCCGAAGAAATCGGCACACTGCGAAATTCGATGGTCGGCAGCTTCAACTCGCTGGAAA TGATGATCGGCCAGTTGAGCCACGAAGGCGCCCGCAAGCAAACCGTGCGCAATGCCAATGAACTGCGCGGCCGGATGATC CACCTCTTGCCGGTCATTGATGCGCTGGATGACGCGCTGTGGGCGCTGGAGCGACGCACACCCGAGCTGCTGGCCAGCGT CAGACCCTTATTGCACAAGACTTGCGACTGGCTCGAAAGCACTGCCGACGGGCCGCAGGTGGAGCAATGGCAGCAGCTGC ATCGTGATCTGCAGAGCCTGCAACCGGACTCCGCGCAACTGGACGATCGCGATCAACTGCTGCTCTCCAATACGCTGTTC AGGCTGGGCGAATGGATCGACCTGTGGCTGGATTGCCGAACCCTGCAATACGCGATCAAGACCGACGACCAGTCACAGTG GCGCGCGGTCTACCGCCACTGGCGCCTGGGCCGGCTTACCCCGTTTCTCGACCGCGGTCTGATGCTCTATTCGGTGACCT CGACAGTACTGGCGATCATCGCCGCGTCGGTGTTGTGGATTCTGCTCGGCTGGAAAGACGGCGCAAGTGCCGTGGCACTG GCGGCGGTGTCGTGCAGCTTCTTCGCCGCCATGGACGACCCTGCTCCGCAAATCTACCGGTTCTTTTTCTGGACCCTGCT CTCGGTGGTGTTCGCCAGCCTGTACCTGTTTGTGGTGCTGCCCAACCTGCATGACTTCCCGATGCTGGTGCTGGCCTTTG CCGTGCCGTTCATTTGCGTCGGCACCCTGACCGTGCAGCCGCGCTTCTTTCTCGGCACGCTGCTGACCATCGTCAACACC TCGTCGTTCATCAGTATCCAGAGCGCTTATGACGCGGACTTCATGAACTTCCTCAACGCCAACCTGGCGGGTCCTGTCGG ACTGCTGTTCGCCTTCATCTGGACCCTGGTGTTCCGCCCGTTCGGCGTCGAACTGGCGGTCAAGCGCCTGACCCGGTTCA GCTGGCGTGACATCGCCAGTCTCAGTGAAAACGCGTCTCTGGCCGAGCATCGGCGCATGGGCGTGCAAATGCTCGACCGC CTGATGCAACAACTGCCGCGCCTGACGCTCACCGCCCAGGACACCGGGATTGCCCTGCGTGAACTGCGCGTCGCGCTGAA CATGCTCGACCTGCTGGCCTACACCCGCCGTGCCACGCCTGCGGCTCAGGTGCTGTTGCGTCAGGTGATCGACGAAGTCA GCGGCTATTTCAAACTGTGCCGCAAGGCCGGTGAACGGCTACCCGCGCCCAGAGGCCTGCTGATGGCCATGGACCGCGCA CGCCGTTCACTGACCGATCAGGAGATGGGCGACAACCCGGCCCGACTGCACCTTCTGCATGCCCTGAGTGGCCTGCGCCT GGCTCTGCTCCCGGGGGTCGAGATCGTCACCGTGGGCGGGGAACTGACCGAGCAACTGCCGCATAACATCGATGGAGCGC CCCTGTGA
Upstream 100 bases:
>100_bases CCGAAGTGCTGCAAGGGCTGCAACCTGCCGATCTGGAAGCCACGTTACGGGTGTTACAGGCGTTTGCCGATGCGGCGCAG CGCGAACACGGGGGCCAGGC
Downstream 100 bases:
>100_bases TCGGTGATCTGGATATCAGCGGGATCTTCATCCCCACGTTCCTGGCGATGATGGGCATCGCCTATCTGCTGTTTCTGGTC GTGCACGCGGTGCTGTCGCG
Product: fusaric acid resistance protein region
Products: NA
Alternate protein names: pHBA efflux pump protein B [H]
Number of amino acids: Translated: 695; Mature: 695
Protein sequence:
>695_residues MNGFFSSVPPARDWFYGVRTFGASMLALYIALLMEMPRPYWAMATVYIVSSPFVGPTSSKALYRAAGTLAGAAASVVLVP MFVQTPLLLAIVVGLWTGTLLFLSLHLRTANSYALMLAGYTMPLISLPVVDNPQAVFDIAVSRTEEIFLGIICAAVVGAM FWPRRLAPVFQATTEKWFSDAATYSQRFISRTCQPEEIGTLRNSMVGSFNSLEMMIGQLSHEGARKQTVRNANELRGRMI HLLPVIDALDDALWALERRTPELLASVRPLLHKTCDWLESTADGPQVEQWQQLHRDLQSLQPDSAQLDDRDQLLLSNTLF RLGEWIDLWLDCRTLQYAIKTDDQSQWRAVYRHWRLGRLTPFLDRGLMLYSVTSTVLAIIAASVLWILLGWKDGASAVAL AAVSCSFFAAMDDPAPQIYRFFFWTLLSVVFASLYLFVVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFFLGTLLTIVNT SSFISIQSAYDADFMNFLNANLAGPVGLLFAFIWTLVFRPFGVELAVKRLTRFSWRDIASLSENASLAEHRRMGVQMLDR LMQQLPRLTLTAQDTGIALRELRVALNMLDLLAYTRRATPAAQVLLRQVIDEVSGYFKLCRKAGERLPAPRGLLMAMDRA RRSLTDQEMGDNPARLHLLHALSGLRLALLPGVEIVTVGGELTEQLPHNIDGAPL
Sequences:
>Translated_695_residues MNGFFSSVPPARDWFYGVRTFGASMLALYIALLMEMPRPYWAMATVYIVSSPFVGPTSSKALYRAAGTLAGAAASVVLVP MFVQTPLLLAIVVGLWTGTLLFLSLHLRTANSYALMLAGYTMPLISLPVVDNPQAVFDIAVSRTEEIFLGIICAAVVGAM FWPRRLAPVFQATTEKWFSDAATYSQRFISRTCQPEEIGTLRNSMVGSFNSLEMMIGQLSHEGARKQTVRNANELRGRMI HLLPVIDALDDALWALERRTPELLASVRPLLHKTCDWLESTADGPQVEQWQQLHRDLQSLQPDSAQLDDRDQLLLSNTLF RLGEWIDLWLDCRTLQYAIKTDDQSQWRAVYRHWRLGRLTPFLDRGLMLYSVTSTVLAIIAASVLWILLGWKDGASAVAL AAVSCSFFAAMDDPAPQIYRFFFWTLLSVVFASLYLFVVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFFLGTLLTIVNT SSFISIQSAYDADFMNFLNANLAGPVGLLFAFIWTLVFRPFGVELAVKRLTRFSWRDIASLSENASLAEHRRMGVQMLDR LMQQLPRLTLTAQDTGIALRELRVALNMLDLLAYTRRATPAAQVLLRQVIDEVSGYFKLCRKAGERLPAPRGLLMAMDRA RRSLTDQEMGDNPARLHLLHALSGLRLALLPGVEIVTVGGELTEQLPHNIDGAPL >Mature_695_residues MNGFFSSVPPARDWFYGVRTFGASMLALYIALLMEMPRPYWAMATVYIVSSPFVGPTSSKALYRAAGTLAGAAASVVLVP MFVQTPLLLAIVVGLWTGTLLFLSLHLRTANSYALMLAGYTMPLISLPVVDNPQAVFDIAVSRTEEIFLGIICAAVVGAM FWPRRLAPVFQATTEKWFSDAATYSQRFISRTCQPEEIGTLRNSMVGSFNSLEMMIGQLSHEGARKQTVRNANELRGRMI HLLPVIDALDDALWALERRTPELLASVRPLLHKTCDWLESTADGPQVEQWQQLHRDLQSLQPDSAQLDDRDQLLLSNTLF RLGEWIDLWLDCRTLQYAIKTDDQSQWRAVYRHWRLGRLTPFLDRGLMLYSVTSTVLAIIAASVLWILLGWKDGASAVAL AAVSCSFFAAMDDPAPQIYRFFFWTLLSVVFASLYLFVVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFFLGTLLTIVNT SSFISIQSAYDADFMNFLNANLAGPVGLLFAFIWTLVFRPFGVELAVKRLTRFSWRDIASLSENASLAEHRRMGVQMLDR LMQQLPRLTLTAQDTGIALRELRVALNMLDLLAYTRRATPAAQVLLRQVIDEVSGYFKLCRKAGERLPAPRGLLMAMDRA RRSLTDQEMGDNPARLHLLHALSGLRLALLPGVEIVTVGGELTEQLPHNIDGAPL
Specific function: Efflux pump whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell [H]
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=641, Percent_Identity=24.4929797191888, Blast_Score=126, Evalue=6e-30, Organism=Escherichia coli, GI1787933, Length=560, Percent_Identity=26.9642857142857, Blast_Score=112, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 77611; Mature: 77611
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGFFSSVPPARDWFYGVRTFGASMLALYIALLMEMPRPYWAMATVYIVSSPFVGPTSSK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCH ALYRAAGTLAGAAASVVLVPMFVQTPLLLAIVVGLWTGTLLFLSLHLRTANSYALMLAGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC TMPLISLPVVDNPQAVFDIAVSRTEEIFLGIICAAVVGAMFWPRRLAPVFQATTEKWFSD HHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATYSQRFISRTCQPEEIGTLRNSMVGSFNSLEMMIGQLSHEGARKQTVRNANELRGRMI HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHH HLLPVIDALDDALWALERRTPELLASVRPLLHKTCDWLESTADGPQVEQWQQLHRDLQSL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC QPDSAQLDDRDQLLLSNTLFRLGEWIDLWLDCRTLQYAIKTDDQSQWRAVYRHWRLGRLT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC PFLDRGLMLYSVTSTVLAIIAASVLWILLGWKDGASAVALAAVSCSFFAAMDDPAPQIYR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH FFFWTLLSVVFASLYLFVVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFFLGTLLTIVNT HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC SSFISIQSAYDADFMNFLNANLAGPVGLLFAFIWTLVFRPFGVELAVKRLTRFSWRDIAS CHHEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LSENASLAEHRRMGVQMLDRLMQQLPRLTLTAQDTGIALRELRVALNMLDLLAYTRRATP HHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCH AAQVLLRQVIDEVSGYFKLCRKAGERLPAPRGLLMAMDRARRSLTDQEMGDNPARLHLLH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHH ALSGLRLALLPGVEIVTVGGELTEQLPHNIDGAPL HHHCCCEEECCCCEEEEECHHHHHHCCCCCCCCCC >Mature Secondary Structure MNGFFSSVPPARDWFYGVRTFGASMLALYIALLMEMPRPYWAMATVYIVSSPFVGPTSSK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCH ALYRAAGTLAGAAASVVLVPMFVQTPLLLAIVVGLWTGTLLFLSLHLRTANSYALMLAGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC TMPLISLPVVDNPQAVFDIAVSRTEEIFLGIICAAVVGAMFWPRRLAPVFQATTEKWFSD HHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATYSQRFISRTCQPEEIGTLRNSMVGSFNSLEMMIGQLSHEGARKQTVRNANELRGRMI HHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHH HLLPVIDALDDALWALERRTPELLASVRPLLHKTCDWLESTADGPQVEQWQQLHRDLQSL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC QPDSAQLDDRDQLLLSNTLFRLGEWIDLWLDCRTLQYAIKTDDQSQWRAVYRHWRLGRLT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC PFLDRGLMLYSVTSTVLAIIAASVLWILLGWKDGASAVALAAVSCSFFAAMDDPAPQIYR HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHH FFFWTLLSVVFASLYLFVVLPNLHDFPMLVLAFAVPFICVGTLTVQPRFFLGTLLTIVNT HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC SSFISIQSAYDADFMNFLNANLAGPVGLLFAFIWTLVFRPFGVELAVKRLTRFSWRDIAS CHHEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LSENASLAEHRRMGVQMLDRLMQQLPRLTLTAQDTGIALRELRVALNMLDLLAYTRRATP HHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCH AAQVLLRQVIDEVSGYFKLCRKAGERLPAPRGLLMAMDRARRSLTDQEMGDNPARLHLLH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHH ALSGLRLALLPGVEIVTVGGELTEQLPHNIDGAPL HHHCCCEEECCCCEEEEECHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA