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The map label for this gene is atoS [C]

Identifier: 66046584

GI number: 66046584

Start: 4012518

End: 4014458

Strand: Reverse

Name: atoS [C]

Synonym: Psyr_3355

Alternate gene names: 66046584

Gene position: 4014458-4012518 (Counterclockwise)

Preceding gene: 66046585

Following gene: 66046581

Centisome position: 65.88

GC content: 60.59

Gene sequence:

>1941_bases
ATGGATGAAGGCTTTTGCATCATTGAATTCCTTGACGGGCCGCACGGTCCGCTGAGCGATTACATTCACGTTGAAGCCAA
CCCGGCCTATGAGTACCACGCCGGCATTTCCAACGTGGTGGGCAAGAAGCTGCGTGAGATGGTTCGCGAGGAGGCCGATG
GCTGGGTGGAGTTTTACGGCGACGTGTTGCGGACCGGCAAGCCGATCCGTTTTGAACGCGAACTGGTGGCCACCGGGCGC
TATCTGGCCTTGACCGCGTTTCGCATCGAGCCGGCCAGCCGTCGGCAGGTCGCTGTACTGTTTCAAGACATCACTGAACG
CAAGCGCGCTGAACTGGAGCTCAAGCAGCTGAACGAGACACTGGAGGCGCGCATTGTCGAAGCAGTGGCCGAGCGCAATG
TGCTGGCCGATGTCGTCAACGGCACCAATGCGATCATTCATGTCGTCGACTGCAATTTTCGCTGGATGGCCATCAATGGC
GCGGCACTGCGCGAGTTCGAGCGCCTGTTCGGCATCCGGCCGCAAGTGGGTGACAGTATGCTCGACCTGCTCGACGACCG
TCCGCAGAGCAAGGCTGATCTTGAAAGGCGCTGGACGCGCGCATTAGCGGGCGAAGAGTTCGCCGAAAGCGTCAGCTTCA
GCGACTCGAACGATCCGGCCAGCCATTTTGAAATACGTTACAGCACGCTGCGCAATGCTCAGGGGCAGGCCATTGGCGCT
TACCTGTTTGCCTACGATGTCAGCGAACGGCTGCGCGAGCAGGAGCGCCTGAGCCAGGCTGAAGAAGCCTTGCGCCAGTC
CCAGAAAATGGAAGCCGTAGGCCAGTTGACTGGCGGTATCGCCCACGACTTCAACAACCTGTTGACCGGCATCACGGGCT
CGCTGGAACTGCTCAAGACACGGGTGAGCCAGGGCCGTTTCAATGAACTGGATCGCTACCTAGGGGCTGCGCAGGATGCC
TCCAAACGTGCGGCGTCACTGACTCATCGATTGCTGGCGTTTTCGCGCCGGCAAACCCTGGACCCCAAACCGGTCGACAT
CAACCGGCTGGTGATCGGCATGGAAGAGCTGATTCGGCGCACGGTCGGGCCGCACATCACTCTGGAAGTCGTGACCTCGG
TCGGGTTGTGGTCAACCTTCATCGACGCGCCGCAACTGGAAAATGCCTTGTTGAACCTGTGCATCAACGCCAGGGACGCC
ATGCCGCGAGGCGGGCGGATCACCATTGAGACGGCCAACCGATGGATTGACGAGCGCGGTTCGCAAGGCCGCGACCTGAT
CCCCGGGCAGTACCTGTCGCTGTGTGTCAGCGACACCGGTACAGGCATGTCGCCCGAGGTCATCAATCGGGTATTCGACC
CTTTCTTCACCACCAAGCCACTGGGGCAGGGTACGGGGCTGGGCTTATCGATGGTGTACGGTTTCGTGCGCCAGTCCGGC
GGGCAGGTGCGCATCTATTCCGAGCCTGGTCAGGGCACGAACATGTGCCTGTACCTGCCGCGTCATTACCTCGGGGCGCC
AGAAGAGATCGAGGCGGCAGATGCCTGTGGATCGGCGCCTGCACAGACCGAGCGCACGGTAATGATTGTTGACGATGAGC
CGACCATCCGCATGCTGGTGGCTGAAGTGCTGGAGGATCAGGGCTACATTCCGATCGAGGCGGGCGAAGGTGCATCCGCG
CTCAAGGTGCTGGAGTCCGATGCGCGTATCGACCTGCTGGTGACTGACGTCGGGTTGCCGGGTGGCATGAATGGCCGGCA
ATTGGCCGATGCTGCGCGCATCATTCGACCCGACCTCAAAGTGCTGTTCATCACCGGGTACGCAGAGAACGCCATCATTG
GCAACGGCCATCTGGATCCGGGCATGTGGGTGCTCACCAAACCCTTCACCATGGAAGCGTTTGCCAGCCGCATCTACGAA
ATGATCGAGCGCGAAGACTGA

Upstream 100 bases:

>100_bases
GGAAAACGCTTCGCTTAAAGAGAGCCTGAGCGTCACGGGGCGGGAGGCCGAATACGCCCTGGCGCAATCCCGGGAGCGTT
ATCGTTTTCTGTTCAACGCC

Downstream 100 bases:

>100_bases
TTCCAGCAGCCGTCAGCGGGTGGGCGGCGCCTGGAATTCACCTTTGGACAAGCCTTCCACGTCATTGCCCATGCTGTCAC
GAATGCTCAGGTCTGCGCCC

Product: PAS

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MDEGFCIIEFLDGPHGPLSDYIHVEANPAYEYHAGISNVVGKKLREMVREEADGWVEFYGDVLRTGKPIRFERELVATGR
YLALTAFRIEPASRRQVAVLFQDITERKRAELELKQLNETLEARIVEAVAERNVLADVVNGTNAIIHVVDCNFRWMAING
AALREFERLFGIRPQVGDSMLDLLDDRPQSKADLERRWTRALAGEEFAESVSFSDSNDPASHFEIRYSTLRNAQGQAIGA
YLFAYDVSERLREQERLSQAEEALRQSQKMEAVGQLTGGIAHDFNNLLTGITGSLELLKTRVSQGRFNELDRYLGAAQDA
SKRAASLTHRLLAFSRRQTLDPKPVDINRLVIGMEELIRRTVGPHITLEVVTSVGLWSTFIDAPQLENALLNLCINARDA
MPRGGRITIETANRWIDERGSQGRDLIPGQYLSLCVSDTGTGMSPEVINRVFDPFFTTKPLGQGTGLGLSMVYGFVRQSG
GQVRIYSEPGQGTNMCLYLPRHYLGAPEEIEAADACGSAPAQTERTVMIVDDEPTIRMLVAEVLEDQGYIPIEAGEGASA
LKVLESDARIDLLVTDVGLPGGMNGRQLADAARIIRPDLKVLFITGYAENAIIGNGHLDPGMWVLTKPFTMEAFASRIYE
MIERED

Sequences:

>Translated_646_residues
MDEGFCIIEFLDGPHGPLSDYIHVEANPAYEYHAGISNVVGKKLREMVREEADGWVEFYGDVLRTGKPIRFERELVATGR
YLALTAFRIEPASRRQVAVLFQDITERKRAELELKQLNETLEARIVEAVAERNVLADVVNGTNAIIHVVDCNFRWMAING
AALREFERLFGIRPQVGDSMLDLLDDRPQSKADLERRWTRALAGEEFAESVSFSDSNDPASHFEIRYSTLRNAQGQAIGA
YLFAYDVSERLREQERLSQAEEALRQSQKMEAVGQLTGGIAHDFNNLLTGITGSLELLKTRVSQGRFNELDRYLGAAQDA
SKRAASLTHRLLAFSRRQTLDPKPVDINRLVIGMEELIRRTVGPHITLEVVTSVGLWSTFIDAPQLENALLNLCINARDA
MPRGGRITIETANRWIDERGSQGRDLIPGQYLSLCVSDTGTGMSPEVINRVFDPFFTTKPLGQGTGLGLSMVYGFVRQSG
GQVRIYSEPGQGTNMCLYLPRHYLGAPEEIEAADACGSAPAQTERTVMIVDDEPTIRMLVAEVLEDQGYIPIEAGEGASA
LKVLESDARIDLLVTDVGLPGGMNGRQLADAARIIRPDLKVLFITGYAENAIIGNGHLDPGMWVLTKPFTMEAFASRIYE
MIERED
>Mature_646_residues
MDEGFCIIEFLDGPHGPLSDYIHVEANPAYEYHAGISNVVGKKLREMVREEADGWVEFYGDVLRTGKPIRFERELVATGR
YLALTAFRIEPASRRQVAVLFQDITERKRAELELKQLNETLEARIVEAVAERNVLADVVNGTNAIIHVVDCNFRWMAING
AALREFERLFGIRPQVGDSMLDLLDDRPQSKADLERRWTRALAGEEFAESVSFSDSNDPASHFEIRYSTLRNAQGQAIGA
YLFAYDVSERLREQERLSQAEEALRQSQKMEAVGQLTGGIAHDFNNLLTGITGSLELLKTRVSQGRFNELDRYLGAAQDA
SKRAASLTHRLLAFSRRQTLDPKPVDINRLVIGMEELIRRTVGPHITLEVVTSVGLWSTFIDAPQLENALLNLCINARDA
MPRGGRITIETANRWIDERGSQGRDLIPGQYLSLCVSDTGTGMSPEVINRVFDPFFTTKPLGQGTGLGLSMVYGFVRQSG
GQVRIYSEPGQGTNMCLYLPRHYLGAPEEIEAADACGSAPAQTERTVMIVDDEPTIRMLVAEVLEDQGYIPIEAGEGASA
LKVLESDARIDLLVTDVGLPGGMNGRQLADAARIIRPDLKVLFITGYAENAIIGNGHLDPGMWVLTKPFTMEAFASRIYE
MIERED

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=300, Percent_Identity=29.3333333333333, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1790436, Length=242, Percent_Identity=27.6859504132231, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI145693157, Length=336, Percent_Identity=26.7857142857143, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI48994928, Length=449, Percent_Identity=24.9443207126949, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788713, Length=389, Percent_Identity=25.4498714652956, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI87081816, Length=184, Percent_Identity=27.1739130434783, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1790300, Length=257, Percent_Identity=28.0155642023346, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 71767; Mature: 71767

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEGFCIIEFLDGPHGPLSDYIHVEANPAYEYHAGISNVVGKKLREMVREEADGWVEFYG
CCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
DVLRTGKPIRFERELVATGRYLALTAFRIEPASRRQVAVLFQDITERKRAELELKQLNET
HHHHCCCCCEEHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEARIVEAVAERNVLADVVNGTNAIIHVVDCNFRWMAINGAALREFERLFGIRPQVGDSM
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCHHHHHHHHHHCCCCCCCHHH
LDLLDDRPQSKADLERRWTRALAGEEFAESVSFSDSNDPASHFEIRYSTLRNAQGQAIGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHCCCCCCCHHH
YLFAYDVSERLREQERLSQAEEALRQSQKMEAVGQLTGGIAHDFNNLLTGITGSLELLKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHH
RVSQGRFNELDRYLGAAQDASKRAASLTHRLLAFSRRQTLDPKPVDINRLVIGMEELIRR
HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TVGPHITLEVVTSVGLWSTFIDAPQLENALLNLCINARDAMPRGGRITIETANRWIDERG
HCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCC
SQGRDLIPGQYLSLCVSDTGTGMSPEVINRVFDPFFTTKPLGQGTGLGLSMVYGFVRQSG
CCCCCCCCCHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC
GQVRIYSEPGQGTNMCLYLPRHYLGAPEEIEAADACGSAPAQTERTVMIVDDEPTIRMLV
CEEEEEECCCCCCCEEEEECHHHCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHH
AEVLEDQGYIPIEAGEGASALKVLESDARIDLLVTDVGLPGGMNGRQLADAARIIRPDLK
HHHHHCCCCEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCE
VLFITGYAENAIIGNGHLDPGMWVLTKPFTMEAFASRIYEMIERED
EEEEECCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDEGFCIIEFLDGPHGPLSDYIHVEANPAYEYHAGISNVVGKKLREMVREEADGWVEFYG
CCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHH
DVLRTGKPIRFERELVATGRYLALTAFRIEPASRRQVAVLFQDITERKRAELELKQLNET
HHHHCCCCCEEHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LEARIVEAVAERNVLADVVNGTNAIIHVVDCNFRWMAINGAALREFERLFGIRPQVGDSM
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCHHHHHHHHHHCCCCCCCHHH
LDLLDDRPQSKADLERRWTRALAGEEFAESVSFSDSNDPASHFEIRYSTLRNAQGQAIGA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEHHHHCCCCCCCHHH
YLFAYDVSERLREQERLSQAEEALRQSQKMEAVGQLTGGIAHDFNNLLTGITGSLELLKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHH
RVSQGRFNELDRYLGAAQDASKRAASLTHRLLAFSRRQTLDPKPVDINRLVIGMEELIRR
HHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TVGPHITLEVVTSVGLWSTFIDAPQLENALLNLCINARDAMPRGGRITIETANRWIDERG
HCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCC
SQGRDLIPGQYLSLCVSDTGTGMSPEVINRVFDPFFTTKPLGQGTGLGLSMVYGFVRQSG
CCCCCCCCCHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCC
GQVRIYSEPGQGTNMCLYLPRHYLGAPEEIEAADACGSAPAQTERTVMIVDDEPTIRMLV
CEEEEEECCCCCCCEEEEECHHHCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHH
AEVLEDQGYIPIEAGEGASALKVLESDARIDLLVTDVGLPGGMNGRQLADAARIIRPDLK
HHHHHCCCCEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCE
VLFITGYAENAIIGNGHLDPGMWVLTKPFTMEAFASRIYEMIERED
EEEEECCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA