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The map label for this gene is spsC [H]

Identifier: 66046450

GI number: 66046450

Start: 3858453

End: 3859574

Strand: Direct

Name: spsC [H]

Synonym: Psyr_3221

Alternate gene names: 66046450

Gene position: 3858453-3859574 (Clockwise)

Preceding gene: 66046447

Following gene: 66046451

Centisome position: 63.32

GC content: 57.58

Gene sequence:

>1122_bases
ATGATTAACGTGACCAAGACGTATCTGGGTGATATCGACCAGTTCAAACGCTACGTCGAAGGCATCTACGCACGTGGCTG
GCTGACCAATCACGGTCCGCTGGCCAGGGAACTGACGGATCGACTCAAGGACTACCTGGGTGTCAGGCACATTATTCTGA
CCAACAACGGCACCCTGGCTCTGCAAGTGGCCTATCGGGCTCTCGGCCTGAGTGGCAGCGCAGTGACCACGCCATTCAGT
TTTGTCGCGACCAGCAGCTCGCTGCAGTGGGAAGGTATCCGGCCCATCTTTGCCGATATCGATGCTCACACCTGGAACAT
CTCGCCCAAACACATCGAAAACAGTATTGCCGAAGACACCACTGCGATCGTCGCCACCCACGTGTTTGGCAATCCTTGTG
ACGTGCAAGCCATTGAGCACATAGCCCGCGAGCACAAGCTCAAGGTCGTCTATGACGGCGCACACGCATTCGCCGTGCGT
CACGCCGGCCAGTCGGTGCTCAATCATGGCGATATCAGCACCCTGAGTTTTCACGCCACCAAACTGTTTCACACCATTGA
AGGTGGCGCGATCATCACCAACGATGACGAACTGGCCAGACAGGCCCATCTGATGTGCAACTTCGGCATTTCCGGCGTCG
ACCGGATCGATGGGATCGGCATTAACGCCAAGCTCAACGAGTTCTCCGCCGCCATGGGGCTGTGCATTCTCGACAATATC
GACAGCATTCTCGAACAGCGCGCAGAGATAGCCGATCACTACACCTCATCGCTGCAAGACTATCTGGATCTGCAGACACC
CCAAGCCGACAGCCAGTTGAATCACAGCTATTACCCTGTGGCCCTGCGCGACGAGCAACAACTGTTGAGCGTGCGCACAG
CACTCAACCAGCACAAGATCAACCCCCGCCGTTACTTCTACCCCTCGCTGGACACCCTTGAATACCTGCAGCCTCAACCC
GGCCAGCCGGTCTCCAGAGCGTTGAGCGAACGAGTGCTGTGCCTGCCGATCTATCCAGGCCTGCTGAGAAGCGAGCAGGA
CCTGGTGATCCGCACCCTGATCGAAGCCTGCACCGTGACTGAAGCTGACTACCGGGCTTGCACCGTTGCGCGGGTCTGCT
GA

Upstream 100 bases:

>100_bases
CGATTCGGCGGTAGCGTGCCCGGCAATCAACGTACCTCTGCGACAGATGCCCGGTCACCCGCTTGGCAAAGCGCTGATTC
AAAGAAACATGGAGGCTTCG

Downstream 100 bases:

>100_bases
CGATCATGCCAGGCAAACATTCCCTCATCCGCAACACCCTTCTGAATTACGGCGGGCAGGCTTATGTGCTGCTGATCGGC
ATTCTGATCATGCCGTTCTA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MINVTKTYLGDIDQFKRYVEGIYARGWLTNHGPLARELTDRLKDYLGVRHIILTNNGTLALQVAYRALGLSGSAVTTPFS
FVATSSSLQWEGIRPIFADIDAHTWNISPKHIENSIAEDTTAIVATHVFGNPCDVQAIEHIAREHKLKVVYDGAHAFAVR
HAGQSVLNHGDISTLSFHATKLFHTIEGGAIITNDDELARQAHLMCNFGISGVDRIDGIGINAKLNEFSAAMGLCILDNI
DSILEQRAEIADHYTSSLQDYLDLQTPQADSQLNHSYYPVALRDEQQLLSVRTALNQHKINPRRYFYPSLDTLEYLQPQP
GQPVSRALSERVLCLPIYPGLLRSEQDLVIRTLIEACTVTEADYRACTVARVC

Sequences:

>Translated_373_residues
MINVTKTYLGDIDQFKRYVEGIYARGWLTNHGPLARELTDRLKDYLGVRHIILTNNGTLALQVAYRALGLSGSAVTTPFS
FVATSSSLQWEGIRPIFADIDAHTWNISPKHIENSIAEDTTAIVATHVFGNPCDVQAIEHIAREHKLKVVYDGAHAFAVR
HAGQSVLNHGDISTLSFHATKLFHTIEGGAIITNDDELARQAHLMCNFGISGVDRIDGIGINAKLNEFSAAMGLCILDNI
DSILEQRAEIADHYTSSLQDYLDLQTPQADSQLNHSYYPVALRDEQQLLSVRTALNQHKINPRRYFYPSLDTLEYLQPQP
GQPVSRALSERVLCLPIYPGLLRSEQDLVIRTLIEACTVTEADYRACTVARVC
>Mature_373_residues
MINVTKTYLGDIDQFKRYVEGIYARGWLTNHGPLARELTDRLKDYLGVRHIILTNNGTLALQVAYRALGLSGSAVTTPFS
FVATSSSLQWEGIRPIFADIDAHTWNISPKHIENSIAEDTTAIVATHVFGNPCDVQAIEHIAREHKLKVVYDGAHAFAVR
HAGQSVLNHGDISTLSFHATKLFHTIEGGAIITNDDELARQAHLMCNFGISGVDRIDGIGINAKLNEFSAAMGLCILDNI
DSILEQRAEIADHYTSSLQDYLDLQTPQADSQLNHSYYPVALRDEQQLLSVRTALNQHKINPRRYFYPSLDTLEYLQPQP
GQPVSRALSERVLCLPIYPGLLRSEQDLVIRTLIEACTVTEADYRACTVARVC

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=359, Percent_Identity=26.4623955431755, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI2367285, Length=358, Percent_Identity=26.8156424581006, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41496; Mature: 41496

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINVTKTYLGDIDQFKRYVEGIYARGWLTNHGPLARELTDRLKDYLGVRHIILTNNGTLA
CCCCCHHHHCCHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCEE
LQVAYRALGLSGSAVTTPFSFVATSSSLQWEGIRPIFADIDAHTWNISPKHIENSIAEDT
EEEEHHHHCCCCCCCCCCHHHEECCCCCCCCCCCHHEECCCCEEECCCHHHHHHHHHHHH
TAIVATHVFGNPCDVQAIEHIAREHKLKVVYDGAHAFAVRHAGQSVLNHGDISTLSFHAT
HHEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEHHHH
KLFHTIEGGAIITNDDELARQAHLMCNFGISGVDRIDGIGINAKLNEFSAAMGLCILDNI
HHHHEECCCEEEECCHHHHHHHHHHEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHH
DSILEQRAEIADHYTSSLQDYLDLQTPQADSQLNHSYYPVALRDEQQLLSVRTALNQHKI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCC
NPRRYFYPSLDTLEYLQPQPGQPVSRALSERVLCLPIYPGLLRSEQDLVIRTLIEACTVT
CCCEEECCCCCHHHHCCCCCCCHHHHHHHCCEEEEECCHHHHCCCHHHHHHHHHHHHHCC
EADYRACTVARVC
CCCHHHEEHHHCC
>Mature Secondary Structure
MINVTKTYLGDIDQFKRYVEGIYARGWLTNHGPLARELTDRLKDYLGVRHIILTNNGTLA
CCCCCHHHHCCHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCEE
LQVAYRALGLSGSAVTTPFSFVATSSSLQWEGIRPIFADIDAHTWNISPKHIENSIAEDT
EEEEHHHHCCCCCCCCCCHHHEECCCCCCCCCCCHHEECCCCEEECCCHHHHHHHHHHHH
TAIVATHVFGNPCDVQAIEHIAREHKLKVVYDGAHAFAVRHAGQSVLNHGDISTLSFHAT
HHEEEEECCCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEHHHH
KLFHTIEGGAIITNDDELARQAHLMCNFGISGVDRIDGIGINAKLNEFSAAMGLCILDNI
HHHHEECCCEEEECCHHHHHHHHHHEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHH
DSILEQRAEIADHYTSSLQDYLDLQTPQADSQLNHSYYPVALRDEQQLLSVRTALNQHKI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCC
NPRRYFYPSLDTLEYLQPQPGQPVSRALSERVLCLPIYPGLLRSEQDLVIRTLIEACTVT
CCCEEECCCCCHHHHCCCCCCCHHHHHHHCCEEEEECCHHHHCCCHHHHHHHHHHHHHCC
EADYRACTVARVC
CCCHHHEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]