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The map label for this gene is ydiK [C]

Identifier: 66046439

GI number: 66046439

Start: 3842764

End: 3843828

Strand: Reverse

Name: ydiK [C]

Synonym: Psyr_3210

Alternate gene names: 66046439

Gene position: 3843828-3842764 (Counterclockwise)

Preceding gene: 66046440

Following gene: 66046416

Centisome position: 63.08

GC content: 58.31

Gene sequence:

>1065_bases
ATGAACGAAACCACGCTGCAATACAAAACCCTCATTCTGCTACTGGTACTGGTGACCATTGCCTTCATATGGATTCTGCT
GCCGTTCTATGGCGCAGTATTCTGGGCGGTCATCCTTGGAATCATCTTCGCGCCTGTGCAGCGCAAGTTGCAGATCAAGT
TCAACTGGTCACGCAATCTCACTTCCCTGTGCACCCTGACGATCTGTCTGGTCATCGCGATTCTGCCGGTGATCGTGATC
AGCGCCTTGCTGGTTCAGGAGGGCACCACGCTGTACAAGAACGTCGAGACCGGGCAACTGGATATCGCCGGTTATCTGGC
CGAGTTCAAGGACCTGTTGCCGCACTCCATGCAGGCGCTGCTCGATCGTCTGGGCATGGGCGACCTGGAGGGGTTACGCG
ACAAGATTGCCAAGGGCGCGATGCAGGGCAGTCAGTACCTGGCGACGCAGGCATTCAGCTTCGGGCAGGGCACCTTCGAC
TTTGTCGTCAGCGTCTTCATCATGCTTTACCTGCTGTACTTCTTCCTGCGCGACGGACAGGAGCTGGTACGCAAGATCCG
CACGGCCTTCCCGTTGGGCGAACAGCAGAAGCGTCGTCTGCAGCTCAAGTTCACCCGAGTGGTACGTGCCACTGTCAAAG
GCAACGTGGTGGTCGCGGTGACGCAAGGTGCGCTGGGTGGCTTCATCTTTTGGATGCTGGACATCCCGAGTGCGTTGCTC
TGGGCGGTGATCATGGCGTTCCTGTCGCTGTTGCCTGCGGTGGGAGCCGGGATTGTCTGGGCGCCAGTGGCGATCTACTT
CCTGCTTAGCGGCATGATCTGGCAAGGTGTGGTACTGGGCTTGTTTGGCGTCCTGGTGATCGGTCTGGTGGATAACGTCC
TGCGTCCGATCCTGGTGGGCAAGGACACCAAAATGCCGGACTACCTGATCCTTATTTCCACGCTGGGCGGCATGTCGGTC
TTTGGTCTGAACGGCTTTGTGATCGGGCCTCTGGTGGCGGCGCTGTTCATGTCCAGCTGGGGATTGTTCAGCGGCGCCAA
GAAGCCCGTGAAACTGCCTGGCTGA

Upstream 100 bases:

>100_bases
CGCCGTCATATTGCCTTCATGGAAGATGGCACTCGTGCGCTCGCGTGCTGACTAAGCTCTAGACCGGGCGCGATGCGCGG
TCTAATGACATGGACAGGAC

Downstream 100 bases:

>100_bases
CATTGCAAGGACGCATTGCCACGTTTGCCCATGACGTCAGGCATTAGCCGTTTTCGAAGACAAAAAAAAGCCCTGCTCGA
GAGCAGGGCTTTTTGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNETTLQYKTLILLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI
SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAKGAMQGSQYLATQAFSFGQGTFD
FVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWMLDIPSALL
WAVIMAFLSLLPAVGAGIVWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGGMSV
FGLNGFVIGPLVAALFMSSWGLFSGAKKPVKLPG

Sequences:

>Translated_354_residues
MNETTLQYKTLILLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI
SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAKGAMQGSQYLATQAFSFGQGTFD
FVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWMLDIPSALL
WAVIMAFLSLLPAVGAGIVWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGGMSV
FGLNGFVIGPLVAALFMSSWGLFSGAKKPVKLPG
>Mature_354_residues
MNETTLQYKTLILLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNLTSLCTLTICLVIAILPVIVI
SALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQALLDRLGMGDLEGLRDKIAKGAMQGSQYLATQAFSFGQGTFD
FVVSVFIMLYLLYFFLRDGQELVRKIRTAFPLGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWMLDIPSALL
WAVIMAFLSLLPAVGAGIVWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVGKDTKMPDYLILISTLGGMSV
FGLNGFVIGPLVAALFMSSWGLFSGAKKPVKLPG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=350, Percent_Identity=28.8571428571429, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38900; Mature: 38900

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETTLQYKTLILLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCH
TSLCTLTICLVIAILPVIVISALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDRLGMGDLEGLRDKIAKGAMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQ
HHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHH
ELVRKIRTAFPLGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWMLDIPSALL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
WAVIMAFLSLLPAVGAGIVWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFMSSWGLFSGAKKPVKLPG
CCCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNETTLQYKTLILLLVLVTIAFIWILLPFYGAVFWAVILGIIFAPVQRKLQIKFNWSRNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCH
TSLCTLTICLVIAILPVIVISALLVQEGTTLYKNVETGQLDIAGYLAEFKDLLPHSMQAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDRLGMGDLEGLRDKIAKGAMQGSQYLATQAFSFGQGTFDFVVSVFIMLYLLYFFLRDGQ
HHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHH
ELVRKIRTAFPLGEQQKRRLQLKFTRVVRATVKGNVVVAVTQGALGGFIFWMLDIPSALL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
WAVIMAFLSLLPAVGAGIVWAPVAIYFLLSGMIWQGVVLGLFGVLVIGLVDNVLRPILVG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDTKMPDYLILISTLGGMSVFGLNGFVIGPLVAALFMSSWGLFSGAKKPVKLPG
CCCCCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]