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The map label for this gene is tusE [H]

Identifier: 66046400

GI number: 66046400

Start: 3798418

End: 3798753

Strand: Direct

Name: tusE [H]

Synonym: Psyr_3171

Alternate gene names: 66046400

Gene position: 3798418-3798753 (Clockwise)

Preceding gene: 66046399

Following gene: 66046401

Centisome position: 62.33

GC content: 58.63

Gene sequence:

>336_bases
ATGAAACAGTTGAACATTGACGGGCGCAGCATCGAACTGGACAAGGATGGTTTTCTGCAAGACCTCAGCGACTGGTCGCT
GGACGTCGCCCACGCCCTGTCCGCCGAGGAAGGCATCGAGCTGAGTGCCGAGCACCTTGAAATCCTCGAACTGCTGCGCG
GTTTTTACGCCGAGTTCCAGCTTTCGCCCGCGACACGACCGCTGATCAAATACACCGCGATGAAGCTGGGTGCGGAAAAA
GGCAACAGCATGCACCTCAACCGCCTGTTCAACGGCACTCCCGCCAAACTCGCCGCCAAGCTGGCGGGCCTGCCCAAACC
GACCAATTGCATATGA

Upstream 100 bases:

>100_bases
TCCGCGCACGCAATCTGCCTCTCCCTGCCGGAGTCAACAGCATCGACTACCCGGCGTTCGTTGAACTGTCGCTGCGCTTC
GACAAGGTCAATACCTGGTT

Downstream 100 bases:

>100_bases
ATGATTACGCTGCGCTTGTCACTGAAACACCTGAAGAACATCCCTTTGCGGCGTTCGTTCGCATTCTGGGCAAAGGCAAA
CGTGGCGCGCGCAACCTGAC

Product: DsrC-like protein

Products: NA

Alternate protein names: tRNA 2-thiouridine synthesizing protein E [H]

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKQLNIDGRSIELDKDGFLQDLSDWSLDVAHALSAEEGIELSAEHLEILELLRGFYAEFQLSPATRPLIKYTAMKLGAEK
GNSMHLNRLFNGTPAKLAAKLAGLPKPTNCI

Sequences:

>Translated_111_residues
MKQLNIDGRSIELDKDGFLQDLSDWSLDVAHALSAEEGIELSAEHLEILELLRGFYAEFQLSPATRPLIKYTAMKLGAEK
GNSMHLNRLFNGTPAKLAAKLAGLPKPTNCI
>Mature_111_residues
MKQLNIDGRSIELDKDGFLQDLSDWSLDVAHALSAEEGIELSAEHLEILELLRGFYAEFQLSPATRPLIKYTAMKLGAEK
GNSMHLNRLFNGTPAKLAAKLAGLPKPTNCI

Specific function: Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Could accept sulfur from tusD [H]

COG id: COG2920

COG function: function code P; Dissimilatory sulfite reductase (desulfoviridin), gamma subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dsrC/tusE family [H]

Homologues:

Organism=Escherichia coli, GI87081811, Length=108, Percent_Identity=50.9259259259259, Blast_Score=114, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007453 [H]

Pfam domain/function: PF04358 DsrC [H]

EC number: NA

Molecular weight: Translated: 12222; Mature: 12222

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLNIDGRSIELDKDGFLQDLSDWSLDVAHALSAEEGIELSAEHLEILELLRGFYAEFQ
CCCCCCCCCEEEECCCCHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
LSPATRPLIKYTAMKLGAEKGNSMHLNRLFNGTPAKLAAKLAGLPKPTNCI
CCCCCCHHHHHHHHHHCCCCCCCEEEHHHCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKQLNIDGRSIELDKDGFLQDLSDWSLDVAHALSAEEGIELSAEHLEILELLRGFYAEFQ
CCCCCCCCCEEEECCCCHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
LSPATRPLIKYTAMKLGAEKGNSMHLNRLFNGTPAKLAAKLAGLPKPTNCI
CCCCCCHHHHHHHHHHCCCCCCCEEEHHHCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA