| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046376
Identifier: 66046376
GI number: 66046376
Start: 3772677
End: 3773048
Strand: Reverse
Name: 66046376
Synonym: Psyr_3147
Alternate gene names: NA
Gene position: 3773048-3772677 (Counterclockwise)
Preceding gene: 66046377
Following gene: 66046375
Centisome position: 61.92
GC content: 61.02
Gene sequence:
>372_bases ATGAAAACATCGCAGTCGGGGTTCACCCTGCTGGAAATGCTTGCTGCACTGACCGTCATGGCGGTGTGCAGCGGTGTTCT GCTGGTGGCGTTCGGGCAAAGTGCGCGCTCTTTGCAGCAGGTGGCGCGCAGTGACCGGCTCAGCCATGCGGCACGCACGA TAATGGATCAGGAAAGCGCCGGTCCGCTGGAAAACGGTACGCGGCAGGGGAAACTCGCAGGCATCGACTGGACACTGGAT ATCCGTCAGCTGCCGGGTGCCAATGGTCAGGCGAGGATGTTCCGTCTCGACCTGATGCTCAGTGAGCATCAGCGCAAGGC GCAGTTCAGCACGTTTAAATTACGCGGCGCTGTCAGCGGGGCGGGGTCATGA
Upstream 100 bases:
>100_bases GCGGCTCCAGTGGCGGCAACGTGGTGGTCGCTGACGGCGACCGACGCTGGCGTATTGATATTGGCTGGCTGACCGGCAGC GTCCAGGTCCGGACGCTTTA
Downstream 100 bases:
>100_bases GGCGCGCCCAGCGTGGCTTCACGCTGCTGGAAGTGCTGCTGGTGATCAGCCTGCTCGGCGTGTTGCTGGTACTGGTGGCC GGGGCGTTGCTGGGGGCCAA
Product: general secretion pathway protein I, putative
Products: NA
Alternate protein names: General Secretion Pathway Protein GspI
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKTSQSGFTLLEMLAALTVMAVCSGVLLVAFGQSARSLQQVARSDRLSHAARTIMDQESAGPLENGTRQGKLAGIDWTLD IRQLPGANGQARMFRLDLMLSEHQRKAQFSTFKLRGAVSGAGS
Sequences:
>Translated_123_residues MKTSQSGFTLLEMLAALTVMAVCSGVLLVAFGQSARSLQQVARSDRLSHAARTIMDQESAGPLENGTRQGKLAGIDWTLD IRQLPGANGQARMFRLDLMLSEHQRKAQFSTFKLRGAVSGAGS >Mature_123_residues MKTSQSGFTLLEMLAALTVMAVCSGVLLVAFGQSARSLQQVARSDRLSHAARTIMDQESAGPLENGTRQGKLAGIDWTLD IRQLPGANGQARMFRLDLMLSEHQRKAQFSTFKLRGAVSGAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13223; Mature: 13223
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSQSGFTLLEMLAALTVMAVCSGVLLVAFGQSARSLQQVARSDRLSHAARTIMDQESA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GPLENGTRQGKLAGIDWTLDIRQLPGANGQARMFRLDLMLSEHQRKAQFSTFKLRGAVSG CCCCCCCCCCCEECCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCC AGS CCC >Mature Secondary Structure MKTSQSGFTLLEMLAALTVMAVCSGVLLVAFGQSARSLQQVARSDRLSHAARTIMDQESA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GPLENGTRQGKLAGIDWTLDIRQLPGANGQARMFRLDLMLSEHQRKAQFSTFKLRGAVSG CCCCCCCCCCCEECCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCC AGS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA