| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ais [H]
Identifier: 66046322
GI number: 66046322
Start: 3708294
End: 3708989
Strand: Reverse
Name: ais [H]
Synonym: Psyr_3093
Alternate gene names: 66046322
Gene position: 3708989-3708294 (Counterclockwise)
Preceding gene: 66046327
Following gene: 66046321
Centisome position: 60.87
GC content: 61.35
Gene sequence:
>696_bases TTGACCGACACGATAATCAACAAGAATGTACTGCCACGTTCGGGCATCAGTCAGCGCTACAAATTGCATCGGCACATCGT ATCGATGTCTGTTGCCGTCGTGCTGACGGCTATCTGCGCGTGGTTCTACTCGGCCTTCTCGGGCGTGCACGTGGTGGACC TGGGGGTGGGCAGCAACCTGAGCGTTTCCGGCCTCCGCGAGCACTGGCGACAAGGCGATGTGGTGGTGATGATTCGCCAT GCCGAACGCTGTGACCGCTCGAACAACCCGTGCATGAGCGACGCCGACGGCATTACCTCCAACGGCCGCGACGCCGCTCT GGCGGTGGGCGCCGGGTTGCAGAAAATGGGCATGGACCACGCGCGCCTGATCGCCAGCCCCAAGACCCGCACGCAACAGA CTGCGCAACTGTTGGCCGGGCACGCGGTGGCTGGCCAAGACTGGATCAACGACTGTGACAGCGGCTTCATGAAGGCTGTG CAGGCTCACAAGGTCAGCGGCGAGAACATGGTGCTGGTGACCCACAGTGGCTGCATCGACCAGTTCGAACGCAAGGCCGG CGTACCTGGCGGCGAGCGCTCGAGTGAGTACGCCCAGGCGTTTTTCGTACAAATAGACGGCAGCCATCCGCCGAAAATCC TCGGCTCCCTGAATGCCGGGCAATGGGCAAACCTCAACAGCGAGCAATTCAATTGA
Upstream 100 bases:
>100_bases CGGGACGATGCTGAACCTATCTTGCCTGCATGGGAGCGGCGCAGACCTCGGGCACTCCCTGGGTCAACGCCAGACATAGG TTCATGGCAGGAGTGGTCCC
Downstream 100 bases:
>100_bases CGACCTCTTCCAGCGCCAGGCTGCGGTTTTACGGCATCAACTTGGGTGTACCGGTGTTTTTCGCTCTACTGGTCTTCGTT ACTTTCGACCTGACCACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTDTIINKNVLPRSGISQRYKLHRHIVSMSVAVVLTAICAWFYSAFSGVHVVDLGVGSNLSVSGLREHWRQGDVVVMIRH AERCDRSNNPCMSDADGITSNGRDAALAVGAGLQKMGMDHARLIASPKTRTQQTAQLLAGHAVAGQDWINDCDSGFMKAV QAHKVSGENMVLVTHSGCIDQFERKAGVPGGERSSEYAQAFFVQIDGSHPPKILGSLNAGQWANLNSEQFN
Sequences:
>Translated_231_residues MTDTIINKNVLPRSGISQRYKLHRHIVSMSVAVVLTAICAWFYSAFSGVHVVDLGVGSNLSVSGLREHWRQGDVVVMIRH AERCDRSNNPCMSDADGITSNGRDAALAVGAGLQKMGMDHARLIASPKTRTQQTAQLLAGHAVAGQDWINDCDSGFMKAV QAHKVSGENMVLVTHSGCIDQFERKAGVPGGERSSEYAQAFFVQIDGSHPPKILGSLNAGQWANLNSEQFN >Mature_230_residues TDTIINKNVLPRSGISQRYKLHRHIVSMSVAVVLTAICAWFYSAFSGVHVVDLGVGSNLSVSGLREHWRQGDVVVMIRHA ERCDRSNNPCMSDADGITSNGRDAALAVGAGLQKMGMDHARLIASPKTRTQQTAQLLAGHAVAGQDWINDCDSGFMKAVQ AHKVSGENMVLVTHSGCIDQFERKAGVPGGERSSEYAQAFFVQIDGSHPPKILGSLNAGQWANLNSEQFN
Specific function: Catalyzes the dephosphorylation of heptose(II) of the outer membrane lipopolysaccharide core [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. Ais subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR011310 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 24958; Mature: 24826
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTIINKNVLPRSGISQRYKLHRHIVSMSVAVVLTAICAWFYSAFSGVHVVDLGVGSNL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC SVSGLREHWRQGDVVVMIRHAERCDRSNNPCMSDADGITSNGRDAALAVGAGLQKMGMDH CHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHCCHHHHCCCH ARLIASPKTRTQQTAQLLAGHAVAGQDWINDCDSGFMKAVQAHKVSGENMVLVTHSGCID HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH QFERKAGVPGGERSSEYAQAFFVQIDGSHPPKILGSLNAGQWANLNSEQFN HHHHHCCCCCCCCHHHHEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDTIINKNVLPRSGISQRYKLHRHIVSMSVAVVLTAICAWFYSAFSGVHVVDLGVGSNL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC SVSGLREHWRQGDVVVMIRHAERCDRSNNPCMSDADGITSNGRDAALAVGAGLQKMGMDH CHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHCCHHHHCCCH ARLIASPKTRTQQTAQLLAGHAVAGQDWINDCDSGFMKAVQAHKVSGENMVLVTHSGCID HHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH QFERKAGVPGGERSSEYAQAFFVQIDGSHPPKILGSLNAGQWANLNSEQFN HHHHHCCCCCCCCHHHHEEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA