| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cusC [H]
Identifier: 66046312
GI number: 66046312
Start: 3688696
End: 3690168
Strand: Reverse
Name: cusC [H]
Synonym: Psyr_3083
Alternate gene names: 66046312
Gene position: 3690168-3688696 (Counterclockwise)
Preceding gene: 66046315
Following gene: 66046311
Centisome position: 60.56
GC content: 63.41
Gene sequence:
>1473_bases ATGCCGATGAGTACACCGCTGTCCAAGCGTATCCGCAACCGCCGCCGGTATGGCCTGGCCATGCTGGCGAGCCTGGTTCT TTCGGGCTGCTCGTTGATACCGGCCTATCAGCGTCCAGCGTTGCCGGTCCCTGTCGATCAGGTGTCTGCTGTTGTCCGGG CCTCGAGTACTTCCGCCGACCTGACGCTCACTGCCGACGAAGAAGCGCTCGCTGCCGAGTTGTCGCCAAAGGGAGAGCTG CGCGGGCTGCTGCAATCGGCTCTGGCGTTCAATCGCGATTTTCGTGTGGCGGTGCTGCGTGTGGAGGAGGCCAGGGCAAT GCGCGGCATCACCCGTGCCGATCGTTTTCCGACCCTTGCTGCAGGTGTCGAGCGCGATCGTCAGCACTTCGATAATGCGG CCGCCGACGAGCGTTATGGCCAGGACATTTCCATCGCGTCGGTGGGCGTCTCTGACTTCGAACTGGATTTCTTCGGGCGC GTGCGTAGCCTGTCGGAGGCGGCGCGGCACGATTATCTGGCCAGCACCTACGGCCAGCAGGCGGCACGCAGTGCGCTGAT TGCGGAAGTCGCCCGCGCCTGGCTGGCCGAGCGTCTGGCCGCCGCCGTGCAGCAGGATGCGCAGGCGGTGCACGAGGCGC GGCTGATGCTGGTCAAGGCGGCCGAAGAGCAGCAGCGTCAAGGTGCACTTTCGCTGGACGATCTGATGGTTCAGCGCCTC GACACTCTGACCGCGCAACAGCAGGTACAGGATGCGGCAAGCGATCACGCCAACGCGTGGCAGGCCTTGTTGTTGCTTAC CGGCTATTCGACAGCGTTGCCCGCGACTAAGCCAGATACCCCTGAGCTGACCGCCGCGTTGGTCGAGACGCCGGCCTGGC TGTCGAATCTGCCGTCTCAGCGTCTGCTGGAGCGTTTTGACATCCGCCAGCGCGAAGAAGCGCTCAAGGCCAGCAATGCC AACATTGGTGCTGCCCGTGCGGCGTTCTTTCCGTCCATAAAACTCAGTACCGGCGTGGGCTTGCAGAGCGACAGCCTGCG CACCTTGTTCAGCAACGGCAGCGGTGCCTGGCTGTTCACCCCGCAATTGAATCTGCCGCTGTTCGACGGCGGGCGTAATC AGGCCAACCTGGATCTTGCCAAGGTGCGTCAGCAGATCGCGGTGGCCGAGTATGAAAAGGCCGTGCAGAACGCCTTCCGT GAAATGTCCGCCGTGCTGACCCGCCGTGAGCAGGCCCTGAACCAGATCCGCAACGAGGTCGAGCGGGTGGCGCTGGTCCA GGAAAAAGTGCGGCGCCTGTCCTTTGAACTCAATGCGGGCGCCGTCGAGCGCACGGCATTGCTGGTTTCCACTCTCCGTA TTGCCGAAGCCGACGCAGCCGCTCGCAAGTCCCTCGATGCGCTGCAGCAAAACCGCATCGATGTGTTTCGAGTGCTGCAC GGAGCAGAACCGACAACCCCACCCCAATCCTGA
Upstream 100 bases:
>100_bases ACGAGCGCGCCTCTTGATCAAATCTTGATAATTCACGAACGGTTTGTTGAAAGTCGACGTTCAGGATGCTGCCCAGAGCC CACTGTCGCGGACAGATCCT
Downstream 100 bases:
>100_bases ATGAAACCGGAGTATCCCCATGAGCCCTGCAATCTCTCGTACTCACCTGCGCTCTGCGCTGCTTAAACCTGTGCTGACCG TGTTGATCACCTCTGCGGCC
Product: RND efflux system, outer membrane lipoprotein, NodT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MPMSTPLSKRIRNRRRYGLAMLASLVLSGCSLIPAYQRPALPVPVDQVSAVVRASSTSADLTLTADEEALAAELSPKGEL RGLLQSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLAAGVERDRQHFDNAAADERYGQDISIASVGVSDFELDFFGR VRSLSEAARHDYLASTYGQQAARSALIAEVARAWLAERLAAAVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMVQRL DTLTAQQQVQDAASDHANAWQALLLLTGYSTALPATKPDTPELTAALVETPAWLSNLPSQRLLERFDIRQREEALKASNA NIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFTPQLNLPLFDGGRNQANLDLAKVRQQIAVAEYEKAVQNAFR EMSAVLTRREQALNQIRNEVERVALVQEKVRRLSFELNAGAVERTALLVSTLRIAEADAAARKSLDALQQNRIDVFRVLH GAEPTTPPQS
Sequences:
>Translated_490_residues MPMSTPLSKRIRNRRRYGLAMLASLVLSGCSLIPAYQRPALPVPVDQVSAVVRASSTSADLTLTADEEALAAELSPKGEL RGLLQSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLAAGVERDRQHFDNAAADERYGQDISIASVGVSDFELDFFGR VRSLSEAARHDYLASTYGQQAARSALIAEVARAWLAERLAAAVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMVQRL DTLTAQQQVQDAASDHANAWQALLLLTGYSTALPATKPDTPELTAALVETPAWLSNLPSQRLLERFDIRQREEALKASNA NIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFTPQLNLPLFDGGRNQANLDLAKVRQQIAVAEYEKAVQNAFR EMSAVLTRREQALNQIRNEVERVALVQEKVRRLSFELNAGAVERTALLVSTLRIAEADAAARKSLDALQQNRIDVFRVLH GAEPTTPPQS >Mature_489_residues PMSTPLSKRIRNRRRYGLAMLASLVLSGCSLIPAYQRPALPVPVDQVSAVVRASSTSADLTLTADEEALAAELSPKGELR GLLQSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLAAGVERDRQHFDNAAADERYGQDISIASVGVSDFELDFFGRV RSLSEAARHDYLASTYGQQAARSALIAEVARAWLAERLAAAVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMVQRLD TLTAQQQVQDAASDHANAWQALLLLTGYSTALPATKPDTPELTAALVETPAWLSNLPSQRLLERFDIRQREEALKASNAN IGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFTPQLNLPLFDGGRNQANLDLAKVRQQIAVAEYEKAVQNAFRE MSAVLTRREQALNQIRNEVERVALVQEKVRRLSFELNAGAVERTALLVSTLRIAEADAAARKSLDALQQNRIDVFRVLHG AEPTTPPQS
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI1786785, Length=476, Percent_Identity=36.1344537815126, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI2367348, Length=150, Percent_Identity=36, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 53613; Mature: 53482
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSTPLSKRIRNRRRYGLAMLASLVLSGCSLIPAYQRPALPVPVDQVSAVVRASSTSAD CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC LTLTADEEALAAELSPKGELRGLLQSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLA EEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCHHH AGVERDRQHFDNAAADERYGQDISIASVGVSDFELDFFGRVRSLSEAARHDYLASTYGQQ HHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AARSALIAEVARAWLAERLAAAVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMVQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DTLTAQQQVQDAASDHANAWQALLLLTGYSTALPATKPDTPELTAALVETPAWLSNLPSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCHHHHCCCHH RLLERFDIRQREEALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFT HHHHHHCHHHHHHHHHHCCCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHCCCCCCEEEC PQLNLPLFDGGRNQANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLTRREQALNQIRNEV CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERVALVQEKVRRLSFELNAGAVERTALLVSTLRIAEADAAARKSLDALQQNRIDVFRVLH HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAEPTTPPQS CCCCCCCCCC >Mature Secondary Structure PMSTPLSKRIRNRRRYGLAMLASLVLSGCSLIPAYQRPALPVPVDQVSAVVRASSTSAD CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC LTLTADEEALAAELSPKGELRGLLQSALAFNRDFRVAVLRVEEARAMRGITRADRFPTLA EEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCHHH AGVERDRQHFDNAAADERYGQDISIASVGVSDFELDFFGRVRSLSEAARHDYLASTYGQQ HHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AARSALIAEVARAWLAERLAAAVQQDAQAVHEARLMLVKAAEEQQRQGALSLDDLMVQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DTLTAQQQVQDAASDHANAWQALLLLTGYSTALPATKPDTPELTAALVETPAWLSNLPSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCHHHHCCCHH RLLERFDIRQREEALKASNANIGAARAAFFPSIKLSTGVGLQSDSLRTLFSNGSGAWLFT HHHHHHCHHHHHHHHHHCCCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHCCCCCCEEEC PQLNLPLFDGGRNQANLDLAKVRQQIAVAEYEKAVQNAFREMSAVLTRREQALNQIRNEV CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERVALVQEKVRRLSFELNAGAVERTALLVSTLRIAEADAAARKSLDALQQNRIDVFRVLH HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAEPTTPPQS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]