| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66046299
Identifier: 66046299
GI number: 66046299
Start: 3668130
End: 3669101
Strand: Reverse
Name: 66046299
Synonym: Psyr_3068
Alternate gene names: NA
Gene position: 3669101-3668130 (Counterclockwise)
Preceding gene: 66046300
Following gene: 66046298
Centisome position: 60.21
GC content: 64.09
Gene sequence:
>972_bases ATGACCACGATCAATACAGCACTGACCTCACTTCTGGACATTGACCACCCGCTGATTCTGGCGCCCATGGGCGGCGCGTC CGGTGGGCGTCTGGCGGCTGCGGTTTCCCGTGCCGGTGGCCTCGGCCTGGTGGGTGCCAGTTACGGCGACCCGCAATGGA TGGCGCGTGAACTGGAGATGATGCGCGAGGTGCAGCAGCCTTGGGGCGTAGGCCTGGTCATGTTTACCGTGGCCAAACAA TTCGAATTGCTTCACCTGGCGCTGGAGTATCGTCCGGCGGTGGTTGCCCTGTCGTTTGGTGATGTACGCCCTTTCGTCAG GCCCATCCATCAGGCCAATGCCAAAGTCATCGTTCAGGTGCACGACGTCGATCAGGCGCTTGAAGCGCTGGACGCCGGTG CCGATGCGCTGATCGTACAAGGCGCCGAGGCGGGGGGGCACAGTTTGCGCCGCTCTTCATTGCCGCTGTTCCCGGCGGTC CGCGACGCGGTGGGTGAGCATGTCGTGCTGATCGGTGCCGGCGGGATCGCCGATGGGCGCGGCATGGCTGCTGCTCTGGC GCTGGGTATGGACGGCGTGATGATGGGTACGCGTTTTCTGGCTTCGCAGGAGGCACTGCCTTCCGAACGGGTAAAGCAGC GACTGCTGCAGGCGGTTGCGAGCGATACGGTGCGAACCCGGATCTTTGATCAGGTGCGCGGCATCGACTGGCCGGAGGGC TACAGCGGACGCGTGATCGGCAATGACTTTTCCGCTAGCTGGGTGGGTGAGGAGCAGGCTTTCGCTGCCTCAGCCGGTCA ACTGCGCCTGGACTATGAAGCCGCATTGGCGGCCGATGATGTCAGTATCCGGGCCATCTGGGCGGGCGAAGTCGCGGACC TGATCAAGGAGGTGCTGCCCGCGCAACGGATTATCGAGTCGACCCTGCGCGGGTATGCCGCCAGTGTCGAACGCCTTCGC ACGCCCCGCTGA
Upstream 100 bases:
>100_bases TTGCCTTACAAAAGGCCGGCTGAGCCAGGACCGACAGAAGAGGGCGGCGCACAGGCCGCCTTCGTCTGATATTCACTCGG ATTTGCACAGGGATTATGCG
Downstream 100 bases:
>100_bases GCCTTCACGATTGAGCCCTCACGATGGAGCAACGACCGGACCCGCTCACAAGGCGGGTCTGGTTCTTTTTGCAGGAGCAA AAGCCATGAGTCATTGCATG
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTTINTALTSLLDIDHPLILAPMGGASGGRLAAAVSRAGGLGLVGASYGDPQWMARELEMMREVQQPWGVGLVMFTVAKQ FELLHLALEYRPAVVALSFGDVRPFVRPIHQANAKVIVQVHDVDQALEALDAGADALIVQGAEAGGHSLRRSSLPLFPAV RDAVGEHVVLIGAGGIADGRGMAAALALGMDGVMMGTRFLASQEALPSERVKQRLLQAVASDTVRTRIFDQVRGIDWPEG YSGRVIGNDFSASWVGEEQAFAASAGQLRLDYEAALAADDVSIRAIWAGEVADLIKEVLPAQRIIESTLRGYAASVERLR TPR
Sequences:
>Translated_323_residues MTTINTALTSLLDIDHPLILAPMGGASGGRLAAAVSRAGGLGLVGASYGDPQWMARELEMMREVQQPWGVGLVMFTVAKQ FELLHLALEYRPAVVALSFGDVRPFVRPIHQANAKVIVQVHDVDQALEALDAGADALIVQGAEAGGHSLRRSSLPLFPAV RDAVGEHVVLIGAGGIADGRGMAAALALGMDGVMMGTRFLASQEALPSERVKQRLLQAVASDTVRTRIFDQVRGIDWPEG YSGRVIGNDFSASWVGEEQAFAASAGQLRLDYEAALAADDVSIRAIWAGEVADLIKEVLPAQRIIESTLRGYAASVERLR TPR >Mature_322_residues TTINTALTSLLDIDHPLILAPMGGASGGRLAAAVSRAGGLGLVGASYGDPQWMARELEMMREVQQPWGVGLVMFTVAKQF ELLHLALEYRPAVVALSFGDVRPFVRPIHQANAKVIVQVHDVDQALEALDAGADALIVQGAEAGGHSLRRSSLPLFPAVR DAVGEHVVLIGAGGIADGRGMAAALALGMDGVMMGTRFLASQEALPSERVKQRLLQAVASDTVRTRIFDQVRGIDWPEGY SGRVIGNDFSASWVGEEQAFAASAGQLRLDYEAALAADDVSIRAIWAGEVADLIKEVLPAQRIIESTLRGYAASVERLRT PR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 34369; Mature: 34238
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTINTALTSLLDIDHPLILAPMGGASGGRLAAAVSRAGGLGLVGASYGDPQWMARELEM CCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH MREVQQPWGVGLVMFTVAKQFELLHLALEYRPAVVALSFGDVRPFVRPIHQANAKVIVQV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEEEE HDVDQALEALDAGADALIVQGAEAGGHSLRRSSLPLFPAVRDAVGEHVVLIGAGGIADGR ECHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCCC GMAAALALGMDGVMMGTRFLASQEALPSERVKQRLLQAVASDTVRTRIFDQVRGIDWPEG HHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC YSGRVIGNDFSASWVGEEQAFAASAGQLRLDYEAALAADDVSIRAIWAGEVADLIKEVLP CCCCEECCCCCCCCCCCHHHHHCCCCCEEEEHHHHHEECCCEEEEEECHHHHHHHHHHHH AQRIIESTLRGYAASVERLRTPR HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTINTALTSLLDIDHPLILAPMGGASGGRLAAAVSRAGGLGLVGASYGDPQWMARELEM CCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH MREVQQPWGVGLVMFTVAKQFELLHLALEYRPAVVALSFGDVRPFVRPIHQANAKVIVQV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEEEE HDVDQALEALDAGADALIVQGAEAGGHSLRRSSLPLFPAVRDAVGEHVVLIGAGGIADGR ECHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCHHHHHHCCCEEEEEECCCCCCCC GMAAALALGMDGVMMGTRFLASQEALPSERVKQRLLQAVASDTVRTRIFDQVRGIDWPEG HHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC YSGRVIGNDFSASWVGEEQAFAASAGQLRLDYEAALAADDVSIRAIWAGEVADLIKEVLP CCCCEECCCCCCCCCCCHHHHHCCCCCEEEEHHHHHEECCCEEEEEECHHHHHHHHHHHH AQRIIESTLRGYAASVERLRTPR HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA