Click here to switch to the map view.

The map label for this gene is yhjB [H]

Identifier: 66046283

GI number: 66046283

Start: 3649676

End: 3651205

Strand: Reverse

Name: yhjB [H]

Synonym: Psyr_3052

Alternate gene names: 66046283

Gene position: 3651205-3649676 (Counterclockwise)

Preceding gene: 66046284

Following gene: 66046281

Centisome position: 59.92

GC content: 60.2

Gene sequence:

>1530_bases
ATGATCAGTACGACTACGGTTTCGGATCTTTACATCACCTTCGGCCTGATCGGCGTGTTTCTGGCGGGCATGATTGCGGT
GCTGTACGCGACGAACCGCAAGAGCGAGAGCTTTTCCGATTACGCGGTGGGTGGTCGCTCTTACGGGCCGTGGTTCATCG
CCATGTGCTACACCAACTCCTGGTGGCCGGGCGCAACGTTCACGGCGTTTTTCGCCTTGTCGGTCGGTGGCGCGCTGGGC
TTTTACGGCATGGTCTACGCCACGCTGGGCGTAACCGCGATGTACCTGATGGCCAATCGTGCCTGGACCTGGGGCAAGCG
CTTCAACCTGACCACCCAACCGGATTTGCTGGGCATGCGCTTCAACAGTCCCGTGGTCAAACGCATTGCTTCGATCATCG
GCATCATCTCGGTATTCCCCTGGGTGGTAATGGGGATTCAGGCCCTCGCGACGCTTTTCCAGTTCGCCAGCTTCGGCCGC
TGGGGCGTGACCACCTGCCTGCTGGTCGGGGTGGTGGTGATCCTGATTCGTCAGTACTGGACAGTGAGCATGGGCATGCG
CGGCCTGATCATGACCGACATGTATCAGGGGTTGATCGCCTATGTACTGTGCGCTGCGCTGTGCATCTTTCTGCTGTTCG
GCGCGCAGGCGTCGTTCAGCAACCTGTCGCAGTTGCCCGCCAGCATGCTGGTGATTCCTGGCGGAGCAGGCAGTACCTAC
GGGCCGATGTACATGTTCAGCCTGATCTTTACCGGCGTTATCGGCTCGATGTGCTGGCCGATGAGCTTTCAGCGCATCTA
CACCGCCAGCGGCGTGCGTTCGGTGAAGAAGGGCACGCTGCTGACCATCCTGCTGGTCGGCGGCTTCTACGGCATTCTGA
TGCTCTTCGCCGCAGCAATCAGCCAGGACCCGAATGTCGCGGCTCATCCGCAACACGGCTGGTTCCTGTCACTCTTCGAC
ATCGGCGGGCCATGGCTGCTTGGCGTGGCAATCATGATCGTGCTGGCGGCCAGCATCGGTCATGTCGACGGCTGCGTTCA
GGTGTGCGGCACGCAGTTTGCCAATGACCTGGCGACCTGGAGCAAGCCACGCAGTGATCGCGAGAAGACCATTCTCGCCA
AGGTCGGCATGGTGGTGTTCATTGCCGCGGCTTCATTACTGGCCTACCTGACCTTCGACTATGCCCGCCTGCAATTGCTG
GCGCAGATTTCCTATCAGGGCATCATCCAGTTGGCCGTGCCGCTGTTCTTCGGCGTGTTCAGTCGTCATGGCAACAAGCA
AGGCGCGATTGCCGGCATGCTGGTGGGGATCGTGATCGCCATCGTACTGACCACGATCTACCCGGATGACATTCCGGCAC
TGGGTTCGTTGACCAGTGGCATCGTCGGTCTGATTTTTAATGCGGGCATCTTCGTTGCCTGTGCCGTTGCCATCAAACCG
AGTGCGGATGAAGTCAGACGCGTCGACGAGTTGTTCGCCATGGCCGCGCCAGCGCGGCGCGGCGTGGGTCCGGTTGTGGC
GATGAGCTGA

Upstream 100 bases:

>100_bases
TCTACTGGATTCTGATCGCGGTGCTCATGGGGCTGGGCCTGTGGATGCTCTACGTGGTCGAGTCGCTGCTGGGTGAAATT
CCACAAGAGGGGGACGGGCA

Downstream 100 bases:

>100_bases
TGCCGCCTGCGGCTCAGCGCGTATTGATAAAGTCGATGAAAGCCCTCAGCGGCGAGGGCAGGTAGCGGCGCCCCGGGTAG
TACAGATACGGCCCGGTGAA

Product: Na+/solute symporter

Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MISTTTVSDLYITFGLIGVFLAGMIAVLYATNRKSESFSDYAVGGRSYGPWFIAMCYTNSWWPGATFTAFFALSVGGALG
FYGMVYATLGVTAMYLMANRAWTWGKRFNLTTQPDLLGMRFNSPVVKRIASIIGIISVFPWVVMGIQALATLFQFASFGR
WGVTTCLLVGVVVILIRQYWTVSMGMRGLIMTDMYQGLIAYVLCAALCIFLLFGAQASFSNLSQLPASMLVIPGGAGSTY
GPMYMFSLIFTGVIGSMCWPMSFQRIYTASGVRSVKKGTLLTILLVGGFYGILMLFAAAISQDPNVAAHPQHGWFLSLFD
IGGPWLLGVAIMIVLAASIGHVDGCVQVCGTQFANDLATWSKPRSDREKTILAKVGMVVFIAAASLLAYLTFDYARLQLL
AQISYQGIIQLAVPLFFGVFSRHGNKQGAIAGMLVGIVIAIVLTTIYPDDIPALGSLTSGIVGLIFNAGIFVACAVAIKP
SADEVRRVDELFAMAAPARRGVGPVVAMS

Sequences:

>Translated_509_residues
MISTTTVSDLYITFGLIGVFLAGMIAVLYATNRKSESFSDYAVGGRSYGPWFIAMCYTNSWWPGATFTAFFALSVGGALG
FYGMVYATLGVTAMYLMANRAWTWGKRFNLTTQPDLLGMRFNSPVVKRIASIIGIISVFPWVVMGIQALATLFQFASFGR
WGVTTCLLVGVVVILIRQYWTVSMGMRGLIMTDMYQGLIAYVLCAALCIFLLFGAQASFSNLSQLPASMLVIPGGAGSTY
GPMYMFSLIFTGVIGSMCWPMSFQRIYTASGVRSVKKGTLLTILLVGGFYGILMLFAAAISQDPNVAAHPQHGWFLSLFD
IGGPWLLGVAIMIVLAASIGHVDGCVQVCGTQFANDLATWSKPRSDREKTILAKVGMVVFIAAASLLAYLTFDYARLQLL
AQISYQGIIQLAVPLFFGVFSRHGNKQGAIAGMLVGIVIAIVLTTIYPDDIPALGSLTSGIVGLIFNAGIFVACAVAIKP
SADEVRRVDELFAMAAPARRGVGPVVAMS
>Mature_509_residues
MISTTTVSDLYITFGLIGVFLAGMIAVLYATNRKSESFSDYAVGGRSYGPWFIAMCYTNSWWPGATFTAFFALSVGGALG
FYGMVYATLGVTAMYLMANRAWTWGKRFNLTTQPDLLGMRFNSPVVKRIASIIGIISVFPWVVMGIQALATLFQFASFGR
WGVTTCLLVGVVVILIRQYWTVSMGMRGLIMTDMYQGLIAYVLCAALCIFLLFGAQASFSNLSQLPASMLVIPGGAGSTY
GPMYMFSLIFTGVIGSMCWPMSFQRIYTASGVRSVKKGTLLTILLVGGFYGILMLFAAAISQDPNVAAHPQHGWFLSLFD
IGGPWLLGVAIMIVLAASIGHVDGCVQVCGTQFANDLATWSKPRSDREKTILAKVGMVVFIAAASLLAYLTFDYARLQLL
AQISYQGIIQLAVPLFFGVFSRHGNKQGAIAGMLVGIVIAIVLTTIYPDDIPALGSLTSGIVGLIFNAGIFVACAVAIKP
SADEVRRVDELFAMAAPARRGVGPVVAMS

Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular Pantothenate. [C]

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 54666; Mature: 54666

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHCCHHCCCCCCEECC
>Mature Secondary Structure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CHHHHHHHHHHHHHHCCHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]