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The map label for this gene is prt1 [H]

Identifier: 66046272

GI number: 66046272

Start: 3639886

End: 3640956

Strand: Direct

Name: prt1 [H]

Synonym: Psyr_3041

Alternate gene names: 66046272

Gene position: 3639886-3640956 (Clockwise)

Preceding gene: 66046270

Following gene: 66046273

Centisome position: 59.73

GC content: 60.04

Gene sequence:

>1071_bases
ATGTGCGACGACCGAAATCCCCTGCATTGCTTCATTCCGCCTTACATGCTCGAGCGTATGGCGCAATCCCCCAAGAATCT
GGTCAGCGCCCGGGCCATCGCCAACCTGACGAGTAGCTCGGCGTTTCTCGCGTCCCGCCTCTCTGCGCGAACCATGCCAT
CCATGCACGCGATCAAATCGCCAGACGGACGAAAGCATCGCGTGATTCATGATGCCAAGGGCACTGACGATCTGCCCGGC
GCCGTGGTGCGCAAGGAAGGCCAGGCAGCGACGGGCGACAAGGCAACCGATGAAGCCTACGATGGCTCAGGCGACGTCTA
CGATTTCTATGCGCAACTGTTCGAACGCAACTCGCTGGACGACAGCGGCATGTCGCTGGTCTCGACCGTGCACGTCGCCG
AAGTGGATTTCAACGGCGATCACGTACCGTTGAGCAACGCCTATTGGAATGGCAGCCAGATGGCTTACGGCGACGGTGAT
GACCTGGTCTTCAAGCGCTTTACCGGCAGCCTTGAAGTGATCGGTCATGAACTGACCCACGGCGTGCAGAGTTTCACCTC
GAATCTGGACTACCGCGGGCAATCCGGGGCCTTGAACGAGCATTTTGCCGACGTGTTCGGCATGCTGGTGCGCCAGTGGA
AACAAGGCACCAGCGCCGCCGAGTCGGACTGGGTGGTGGGCAAGGAGTTGCTGGTGCCGGCGCCGACGCGACGAGGCATT
CGCGATATGGAAAAACCCGGCACTGCCTATTCCAACGATCCGGATCTGGGCGATGATCCGCAACCTGCAACGATGGCCGA
CCTGTATACCGGTGCCAAGGATCGCGGCGGTGTACACATCAACTCGGGCATTCCCAACCGGGCATTCGTGCTGGTGGCCA
AGGCGCTGGGCGGAAATGCCTGGGAAGTGGCGGGCAGAATCTGGTATGAAACGATGCTGGAGCTGGCCTCGGACAGTCAA
TTCATCGATTGTGCCAAGGCCAGCATAAAAGTAGCCTCGGACCCACGCTTCGGCCCCAAAGCCAAGAAAGCCGTGCAGGC
GGCCTGGAAAGAGGTCGGTCTCAAGGTATAG

Upstream 100 bases:

>100_bases
GATATTTCGTTGCATATAAACGCGACATGAAGTGTCACACGACTGCGACCATGTTGATCGGTGGCTTGCCGCCATCGATG
CATTAGTACAGGAGTTCATC

Downstream 100 bases:

>100_bases
GCAAAGCATAACCACCAAAAGGTGCTTGAAATGAAGGTCTGTCTAGTGCAATCCGGCGGTTTTGCAGGTGCAGTCAAACG
CTGTGAGGTCGATACAGCCA

Product: bacillolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MCDDRNPLHCFIPPYMLERMAQSPKNLVSARAIANLTSSSAFLASRLSARTMPSMHAIKSPDGRKHRVIHDAKGTDDLPG
AVVRKEGQAATGDKATDEAYDGSGDVYDFYAQLFERNSLDDSGMSLVSTVHVAEVDFNGDHVPLSNAYWNGSQMAYGDGD
DLVFKRFTGSLEVIGHELTHGVQSFTSNLDYRGQSGALNEHFADVFGMLVRQWKQGTSAAESDWVVGKELLVPAPTRRGI
RDMEKPGTAYSNDPDLGDDPQPATMADLYTGAKDRGGVHINSGIPNRAFVLVAKALGGNAWEVAGRIWYETMLELASDSQ
FIDCAKASIKVASDPRFGPKAKKAVQAAWKEVGLKV

Sequences:

>Translated_356_residues
MCDDRNPLHCFIPPYMLERMAQSPKNLVSARAIANLTSSSAFLASRLSARTMPSMHAIKSPDGRKHRVIHDAKGTDDLPG
AVVRKEGQAATGDKATDEAYDGSGDVYDFYAQLFERNSLDDSGMSLVSTVHVAEVDFNGDHVPLSNAYWNGSQMAYGDGD
DLVFKRFTGSLEVIGHELTHGVQSFTSNLDYRGQSGALNEHFADVFGMLVRQWKQGTSAAESDWVVGKELLVPAPTRRGI
RDMEKPGTAYSNDPDLGDDPQPATMADLYTGAKDRGGVHINSGIPNRAFVLVAKALGGNAWEVAGRIWYETMLELASDSQ
FIDCAKASIKVASDPRFGPKAKKAVQAAWKEVGLKV
>Mature_356_residues
MCDDRNPLHCFIPPYMLERMAQSPKNLVSARAIANLTSSSAFLASRLSARTMPSMHAIKSPDGRKHRVIHDAKGTDDLPG
AVVRKEGQAATGDKATDEAYDGSGDVYDFYAQLFERNSLDDSGMSLVSTVHVAEVDFNGDHVPLSNAYWNGSQMAYGDGD
DLVFKRFTGSLEVIGHELTHGVQSFTSNLDYRGQSGALNEHFADVFGMLVRQWKQGTSAAESDWVVGKELLVPAPTRRGI
RDMEKPGTAYSNDPDLGDDPQPATMADLYTGAKDRGGVHINSGIPNRAFVLVAKALGGNAWEVAGRIWYETMLELASDSQ
FIDCAKASIKVASDPRFGPKAKKAVQAAWKEVGLKV

Specific function: Unknown

COG id: COG3227

COG function: function code E; Zinc metalloprotease (elastase)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013856
- InterPro:   IPR001570 [H]

Pfam domain/function: PF01447 Peptidase_M4; PF02868 Peptidase_M4_C [H]

EC number: NA

Molecular weight: Translated: 38644; Mature: 38644

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDDRNPLHCFIPPYMLERMAQSPKNLVSARAIANLTSSSAFLASRLSARTMPSMHAIKS
CCCCCCCEEEECCHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHCC
PDGRKHRVIHDAKGTDDLPGAVVRKEGQAATGDKATDEAYDGSGDVYDFYAQLFERNSLD
CCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
DSGMSLVSTVHVAEVDFNGDHVPLSNAYWNGSQMAYGDGDDLVFKRFTGSLEVIGHELTH
CCCHHHHHEEEEEEECCCCCCCCCCCCEECCCEEEECCCCCHHHHHHCCCHHHHHHHHHH
GVQSFTSNLDYRGQSGALNEHFADVFGMLVRQWKQGTSAAESDWVVGKELLVPAPTRRGI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHCCCCCCHHCH
RDMEKPGTAYSNDPDLGDDPQPATMADLYTGAKDRGGVHINSGIPNRAFVLVAKALGGNA
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCEEEEEEHHHCCCH
WEVAGRIWYETMLELASDSQFIDCAKASIKVASDPRFGPKAKKAVQAAWKEVGLKV
HHHHHHHHHHHHHHHHCCCCHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCDDRNPLHCFIPPYMLERMAQSPKNLVSARAIANLTSSSAFLASRLSARTMPSMHAIKS
CCCCCCCEEEECCHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHCC
PDGRKHRVIHDAKGTDDLPGAVVRKEGQAATGDKATDEAYDGSGDVYDFYAQLFERNSLD
CCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
DSGMSLVSTVHVAEVDFNGDHVPLSNAYWNGSQMAYGDGDDLVFKRFTGSLEVIGHELTH
CCCHHHHHEEEEEEECCCCCCCCCCCCEECCCEEEECCCCCHHHHHHCCCHHHHHHHHHH
GVQSFTSNLDYRGQSGALNEHFADVFGMLVRQWKQGTSAAESDWVVGKELLVPAPTRRGI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHCCCCCCHHCH
RDMEKPGTAYSNDPDLGDDPQPATMADLYTGAKDRGGVHINSGIPNRAFVLVAKALGGNA
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCEEEEEEHHHCCCH
WEVAGRIWYETMLELASDSQFIDCAKASIKVASDPRFGPKAKKAVQAAWKEVGLKV
HHHHHHHHHHHHHHHHCCCCHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917878 [H]