| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cbg-1 [H]
Identifier: 66046266
GI number: 66046266
Start: 3633552
End: 3636293
Strand: Direct
Name: cbg-1 [H]
Synonym: Psyr_3035
Alternate gene names: 66046266
Gene position: 3633552-3636293 (Clockwise)
Preceding gene: 66046265
Following gene: 66046270
Centisome position: 59.63
GC content: 60.18
Gene sequence:
>2742_bases ATGAACAACCTCAATCAACCGATCACATCGACCGCAAGGACACTTGCCTTGTCAGCCTTCAAACAGACGCTGGGCCTGAG TCTGCTGACGTTCAGCGTCATGCAGGCCAACCTTGCACTCGCCGCCGTGACCCCGGCGACCGGCAACGAAGTCGAAGCGC GCGTCAGCTCGATTCTCGATAACATGAACCAGTCGGAAAAGATCAACTTCACCCGCGTCAACGACGGTCACATGATCCCG TCGCTGCTCAAGTGGGGCATCAAGGGCACCGTGGCGTATGACTCGTCCATGGGCGTGCACGTCAACAACGCCACCTTCGG CGCCCAGTACCCGTCGCAGTCTGCGCTGGCAGCGACCTGGAGCATCAACCGGGCCAAGGAATTCGGCCTGGCCATCGCTT ATGAAACGCGAATTTCCGGCGGCCAGCAGATGCTTTCGCCAGGCGTGAACCTGTACCGGACGCCCTACAACGGCCGCTCG GCAGAATACGTCAGCGGTGAAGACCCGTTCCTCGGCGCCGTGCTGGCACCCGCTATCGTCAACGGCATTCAGGCTCAGGG CATCCAGGCCAGCGGCAAGCACTACCTGGCCAACGAGCAGGAAGCCAATCGTCAGGCGATCGACGTCAAGGTCGATGAGC GCACCCTGCGCGAACTGTACCTTCCAGGCTTCGAGTCGATGGTGAAGAACGCCAATGTCGCCTCGATCATGTGCGGCTTC AACAAGGTCAACGGCGACTATGCCTGTGAAAACCATCACCTGATCACTGAAGTGCTCAAGGGCGAATGGGGCTATCAGGG CATGGTCATCAGTGATTTCAACGCCATCCACGATGCCTTCAAGGGCGCGTGGGCCGGTACGGACATCGACATGCCCTCCG GCCTGCAGTTTACCGAAGCCAATCTCCTGCCCTACCTGTGGAGCGGGCAACTGACCCAGAACGTGATCGACGACAAGGTC AAACGCAACCTGCGTGGCATCGTCAGCTACGACCTGCAGAACCACCTCAACACCGCCAAGACATTGGAACATCCGGAATA CGGCATGCGTGCCGCGCTGAATACCGCGCGCGAATCCATCGTGTTGCTGCGCAACGAGAACACCGCTGCCGGCAAACCGC TGCTGCCGCTGGAGCGTTCAGCGAAAATCGCCGTGATCGGCAACTGGGCGCACGACGTACCGGCATCGCCTTTCGGCACC GCCAATTCACCGCCCAATAGCTACGTGACCGAGTTGAGCGGCTTGCAGCAACTGGCCTCCAGCAGCAGCGATGTCACGTA TCTGTCGGAGATGAGCCTGAATCCGGCGAGCTCGGTGTGGTATCAGCCGGCAACCGGTGACAACGGGATCAGCAACGCCG GGGTAAAAGCCGAATACTTCTCTAACACCAGCTTTTCCGGTGACCCGGTACTGACGCGCGTCGAGCCCGGCGTGAACCTG AACTGGACCACCGGCAGCAACGTGACCAACGCAGGCAGCACGGCAGTGTCTGGCTTCAGCCCGACAGCCGGCGCTTTCTC GGCACGTTTCACCACTACCATCAAGCCCACCATTTCGGGCGCCCAGGCGTTCAAGGTGCGTGCGGATGGCCCGTACAAAC TCTGGGTCAATGATGAGCTCATCGTGCAGAGCGACGGCGTGCCTTACTCGGGCGATGTGGTGAATGCACTGACAACGTCG GGGAAGACTGCCGCATTGTCAGCCGGCAAGACCTATACCGTGAAACTGGAATACCAGCGCGTACAGGGTAATTTCATTCC CGCACTGGGCGGCCTGACCGGCGTGCAGATGAGCTGGGCTTCGTTGCGTCCGCCGAAGGATCTGTCGAAATACGATGCGG TGGTGGTTGCGACCGGGACCACGTCTGAAAACGAAGGCGAAGGTTCCGACCACGGCTTCGATCTGCCGGACCAACAGGCT GAACTGATCAGCTTCGTTGCCAAGGCCAACCCCAACACCATCGTGGTCATGCACGGCGGTGGCGTGGCCAATATGCAGCC ATGGGCGAACAAGGTCGGCGCCACGCTGCAAGCCTGGTTCCCGGGCCAGCAAGGCGGTCAGGCACTGGCCGAGATCCTCT ACGGCAAGGTCAACCCGTCGGGCAAGTTGCCGGTCACGATCGACAAGAACATCGAGGATAACCCGAGCTATGCCTCTTAT CCGGATCCGGCGGCCTATCGCGGCAGCAACCCGCTGACCGAGATGACCTACAGCGAAGGCCTGTACATGGGTTATCGCGG GTATGACAAGAAACACGCCAAGCCGCTTTATCCATTCGGCTATGGCCTGTCCTACACCACGTTCAGCTACAGCGACCTGA AACTGTCGACCAACGTGCTGACCCCAGGCTCGACGATCGACGTGAAATTCACGGTGACCAACACCGGCGACAAGGCCGGC TTCGAGGTGGCGCAGCTGTATGTGCAGCCGGTCAAACCTGCTGTGGACCGTCCTGAGAAAGAGCTCAAGGGCTTCACCAA GGTGTATCTGCAGCCGGGCGAGAGCAAGACCGTCAGCGTACCGATAGACTCGCGCTCCCTGGCTTACTACGTCGACAAGA CGGCAAGCTGGGACGTCGATGCCGGGAAATTCAAGATCCTCGTCGGCGCGGATTCGGAGAACCTCACGCTCAACAGGACG CTGATCACCCTGTACCCGGAAAAACTGACCACGCGTGACAGCAACCCGCTGCCATTGCCACTGCGCAAGGCAGTCCAGGT CAGCGCGGCACAGACCTACTGA
Upstream 100 bases:
>100_bases CAGGCGCCGACAAGATCAACCCGGCCCAACAGCAGAGTTCGTCGTCCCTGCTCGACGCGCCGGTGAACACCGACGACGCC CCTGCCCAGGCACAACGACC
Downstream 100 bases:
>100_bases TGCACCCCGTCAAGGCTCATGGATGAGCCTTGATATCCCTTCCCAATCGCTGCACGTAGATATCGAAAACCGCCATGACA TCCACGTCGCGGGGGCTTCG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MNNLNQPITSTARTLALSAFKQTLGLSLLTFSVMQANLALAAVTPATGNEVEARVSSILDNMNQSEKINFTRVNDGHMIP SLLKWGIKGTVAYDSSMGVHVNNATFGAQYPSQSALAATWSINRAKEFGLAIAYETRISGGQQMLSPGVNLYRTPYNGRS AEYVSGEDPFLGAVLAPAIVNGIQAQGIQASGKHYLANEQEANRQAIDVKVDERTLRELYLPGFESMVKNANVASIMCGF NKVNGDYACENHHLITEVLKGEWGYQGMVISDFNAIHDAFKGAWAGTDIDMPSGLQFTEANLLPYLWSGQLTQNVIDDKV KRNLRGIVSYDLQNHLNTAKTLEHPEYGMRAALNTARESIVLLRNENTAAGKPLLPLERSAKIAVIGNWAHDVPASPFGT ANSPPNSYVTELSGLQQLASSSSDVTYLSEMSLNPASSVWYQPATGDNGISNAGVKAEYFSNTSFSGDPVLTRVEPGVNL NWTTGSNVTNAGSTAVSGFSPTAGAFSARFTTTIKPTISGAQAFKVRADGPYKLWVNDELIVQSDGVPYSGDVVNALTTS GKTAALSAGKTYTVKLEYQRVQGNFIPALGGLTGVQMSWASLRPPKDLSKYDAVVVATGTTSENEGEGSDHGFDLPDQQA ELISFVAKANPNTIVVMHGGGVANMQPWANKVGATLQAWFPGQQGGQALAEILYGKVNPSGKLPVTIDKNIEDNPSYASY PDPAAYRGSNPLTEMTYSEGLYMGYRGYDKKHAKPLYPFGYGLSYTTFSYSDLKLSTNVLTPGSTIDVKFTVTNTGDKAG FEVAQLYVQPVKPAVDRPEKELKGFTKVYLQPGESKTVSVPIDSRSLAYYVDKTASWDVDAGKFKILVGADSENLTLNRT LITLYPEKLTTRDSNPLPLPLRKAVQVSAAQTY
Sequences:
>Translated_913_residues MNNLNQPITSTARTLALSAFKQTLGLSLLTFSVMQANLALAAVTPATGNEVEARVSSILDNMNQSEKINFTRVNDGHMIP SLLKWGIKGTVAYDSSMGVHVNNATFGAQYPSQSALAATWSINRAKEFGLAIAYETRISGGQQMLSPGVNLYRTPYNGRS AEYVSGEDPFLGAVLAPAIVNGIQAQGIQASGKHYLANEQEANRQAIDVKVDERTLRELYLPGFESMVKNANVASIMCGF NKVNGDYACENHHLITEVLKGEWGYQGMVISDFNAIHDAFKGAWAGTDIDMPSGLQFTEANLLPYLWSGQLTQNVIDDKV KRNLRGIVSYDLQNHLNTAKTLEHPEYGMRAALNTARESIVLLRNENTAAGKPLLPLERSAKIAVIGNWAHDVPASPFGT ANSPPNSYVTELSGLQQLASSSSDVTYLSEMSLNPASSVWYQPATGDNGISNAGVKAEYFSNTSFSGDPVLTRVEPGVNL NWTTGSNVTNAGSTAVSGFSPTAGAFSARFTTTIKPTISGAQAFKVRADGPYKLWVNDELIVQSDGVPYSGDVVNALTTS GKTAALSAGKTYTVKLEYQRVQGNFIPALGGLTGVQMSWASLRPPKDLSKYDAVVVATGTTSENEGEGSDHGFDLPDQQA ELISFVAKANPNTIVVMHGGGVANMQPWANKVGATLQAWFPGQQGGQALAEILYGKVNPSGKLPVTIDKNIEDNPSYASY PDPAAYRGSNPLTEMTYSEGLYMGYRGYDKKHAKPLYPFGYGLSYTTFSYSDLKLSTNVLTPGSTIDVKFTVTNTGDKAG FEVAQLYVQPVKPAVDRPEKELKGFTKVYLQPGESKTVSVPIDSRSLAYYVDKTASWDVDAGKFKILVGADSENLTLNRT LITLYPEKLTTRDSNPLPLPLRKAVQVSAAQTY >Mature_913_residues MNNLNQPITSTARTLALSAFKQTLGLSLLTFSVMQANLALAAVTPATGNEVEARVSSILDNMNQSEKINFTRVNDGHMIP SLLKWGIKGTVAYDSSMGVHVNNATFGAQYPSQSALAATWSINRAKEFGLAIAYETRISGGQQMLSPGVNLYRTPYNGRS AEYVSGEDPFLGAVLAPAIVNGIQAQGIQASGKHYLANEQEANRQAIDVKVDERTLRELYLPGFESMVKNANVASIMCGF NKVNGDYACENHHLITEVLKGEWGYQGMVISDFNAIHDAFKGAWAGTDIDMPSGLQFTEANLLPYLWSGQLTQNVIDDKV KRNLRGIVSYDLQNHLNTAKTLEHPEYGMRAALNTARESIVLLRNENTAAGKPLLPLERSAKIAVIGNWAHDVPASPFGT ANSPPNSYVTELSGLQQLASSSSDVTYLSEMSLNPASSVWYQPATGDNGISNAGVKAEYFSNTSFSGDPVLTRVEPGVNL NWTTGSNVTNAGSTAVSGFSPTAGAFSARFTTTIKPTISGAQAFKVRADGPYKLWVNDELIVQSDGVPYSGDVVNALTTS GKTAALSAGKTYTVKLEYQRVQGNFIPALGGLTGVQMSWASLRPPKDLSKYDAVVVATGTTSENEGEGSDHGFDLPDQQA ELISFVAKANPNTIVVMHGGGVANMQPWANKVGATLQAWFPGQQGGQALAEILYGKVNPSGKLPVTIDKNIEDNPSYASY PDPAAYRGSNPLTEMTYSEGLYMGYRGYDKKHAKPLYPFGYGLSYTTFSYSDLKLSTNVLTPGSTIDVKFTVTNTGDKAG FEVAQLYVQPVKPAVDRPEKELKGFTKVYLQPGESKTVSVPIDSRSLAYYVDKTASWDVDAGKFKILVGADSENLTLNRT LITLYPEKLTTRDSNPLPLPLRKAVQVSAAQTY
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=263, Percent_Identity=36.8821292775665, Blast_Score=162, Evalue=7e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 98326; Mature: 98326
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLNQPITSTARTLALSAFKQTLGLSLLTFSVMQANLALAAVTPATGNEVEARVSSILD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHH NMNQSEKINFTRVNDGHMIPSLLKWGIKGTVAYDSSMGVHVNNATFGAQYPSQSALAATW CCCCCCCEEEEEECCCCCHHHHHHCCCCEEEEECCCCCEEECCCEECCCCCCCCCEEEEE SINRAKEFGLAIAYETRISGGQQMLSPGVNLYRTPYNGRSAEYVSGEDPFLGAVLAPAIV ECCCHHHCCEEEEEEECCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH NGIQAQGIQASGKHYLANEQEANRQAIDVKVDERTLRELYLPGFESMVKNANVASIMCGF CCHHHCCCCCCCCEEECCCCCCCCEEEEEEECHHHHHHHHCCCHHHHHCCCCEEEEEECC NKVNGDYACENHHLITEVLKGEWGYQGMVISDFNAIHDAFKGAWAGTDIDMPSGLQFTEA EECCCCEEECCCHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCEEECC NLLPYLWSGQLTQNVIDDKVKRNLRGIVSYDLQNHLNTAKTLEHPEYGMRAALNTARESI CCCCEEECCCHHHHHHHHHHHHHHHHHEEECHHHHCCHHHHCCCCCHHHHHHHHHCCCEE VLLRNENTAAGKPLLPLERSAKIAVIGNWAHDVPASPFGTANSPPNSYVTELSGLQQLAS EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC SSSDVTYLSEMSLNPASSVWYQPATGDNGISNAGVKAEYFSNTSFSGDPVLTRVEPGVNL CCCCEEEEEECCCCCCHHEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEE NWTTGSNVTNAGSTAVSGFSPTAGAFSARFTTTIKPTISGAQAFKVRADGPYKLWVNDEL EECCCCCCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEECCEE IVQSDGVPYSGDVVNALTTSGKTAALSAGKTYTVKLEYQRVQGNFIPALGGLTGVQMSWA EEECCCCCCCCCHHHHHHCCCCEEEEECCCEEEEEEEEEEECCCCCCHHCCCCCCEEEHH SLRPPKDLSKYDAVVVATGTTSENEGEGSDHGFDLPDQQAELISFVAKANPNTIVVMHGG HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC GVANMQPWANKVGATLQAWFPGQQGGQALAEILYGKVNPSGKLPVTIDKNIEDNPSYASY CCCCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC PDPAAYRGSNPLTEMTYSEGLYMGYRGYDKKHAKPLYPFGYGLSYTTFSYSDLKLSTNVL CCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEE TPGSTIDVKFTVTNTGDKAGFEVAQLYVQPVKPAVDRPEKELKGFTKVYLQPGESKTVSV CCCCEEEEEEEEECCCCCCCHHEEEHHHHCCCCCCCCCHHHHCCEEEEEEECCCCCEEEE PIDSRSLAYYVDKTASWDVDAGKFKILVGADSENLTLNRTLITLYPEKLTTRDSNPLPLP ECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECHHHCCCCCCCCCCC LRKAVQVSAAQTY HHHHHHHHHHCCC >Mature Secondary Structure MNNLNQPITSTARTLALSAFKQTLGLSLLTFSVMQANLALAAVTPATGNEVEARVSSILD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHH NMNQSEKINFTRVNDGHMIPSLLKWGIKGTVAYDSSMGVHVNNATFGAQYPSQSALAATW CCCCCCCEEEEEECCCCCHHHHHHCCCCEEEEECCCCCEEECCCEECCCCCCCCCEEEEE SINRAKEFGLAIAYETRISGGQQMLSPGVNLYRTPYNGRSAEYVSGEDPFLGAVLAPAIV ECCCHHHCCEEEEEEECCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH NGIQAQGIQASGKHYLANEQEANRQAIDVKVDERTLRELYLPGFESMVKNANVASIMCGF CCHHHCCCCCCCCEEECCCCCCCCEEEEEEECHHHHHHHHCCCHHHHHCCCCEEEEEECC NKVNGDYACENHHLITEVLKGEWGYQGMVISDFNAIHDAFKGAWAGTDIDMPSGLQFTEA EECCCCEEECCCHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCEEECC NLLPYLWSGQLTQNVIDDKVKRNLRGIVSYDLQNHLNTAKTLEHPEYGMRAALNTARESI CCCCEEECCCHHHHHHHHHHHHHHHHHEEECHHHHCCHHHHCCCCCHHHHHHHHHCCCEE VLLRNENTAAGKPLLPLERSAKIAVIGNWAHDVPASPFGTANSPPNSYVTELSGLQQLAS EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC SSSDVTYLSEMSLNPASSVWYQPATGDNGISNAGVKAEYFSNTSFSGDPVLTRVEPGVNL CCCCEEEEEECCCCCCHHEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEE NWTTGSNVTNAGSTAVSGFSPTAGAFSARFTTTIKPTISGAQAFKVRADGPYKLWVNDEL EECCCCCCCCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCEEEEECCEE IVQSDGVPYSGDVVNALTTSGKTAALSAGKTYTVKLEYQRVQGNFIPALGGLTGVQMSWA EEECCCCCCCCCHHHHHHCCCCEEEEECCCEEEEEEEEEEECCCCCCHHCCCCCCEEEHH SLRPPKDLSKYDAVVVATGTTSENEGEGSDHGFDLPDQQAELISFVAKANPNTIVVMHGG HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC GVANMQPWANKVGATLQAWFPGQQGGQALAEILYGKVNPSGKLPVTIDKNIEDNPSYASY CCCCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC PDPAAYRGSNPLTEMTYSEGLYMGYRGYDKKHAKPLYPFGYGLSYTTFSYSDLKLSTNVL CCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEEE TPGSTIDVKFTVTNTGDKAGFEVAQLYVQPVKPAVDRPEKELKGFTKVYLQPGESKTVSV CCCCEEEEEEEEECCCCCCCHHEEEHHHHCCCCCCCCCHHHHCCEEEEEEECCCCCEEEE PIDSRSLAYYVDKTASWDVDAGKFKILVGADSENLTLNRTLITLYPEKLTTRDSNPLPLP ECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECHHHCCCCCCCCCCC LRKAVQVSAAQTY HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]