| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is galU [H]
Identifier: 66046211
GI number: 66046211
Start: 3573452
End: 3574291
Strand: Reverse
Name: galU [H]
Synonym: Psyr_2980
Alternate gene names: 66046211
Gene position: 3574291-3573452 (Counterclockwise)
Preceding gene: 66046213
Following gene: 66046210
Centisome position: 58.66
GC content: 56.31
Gene sequence:
>840_bases ATGATCAAGAAATGCTTGTTCCCAGCAGCCGGTTACGGCACTCGCTTCCTGCCAGCGACCAAGGCCATGCCCAAGGAAAT GCTGCCGGTGGTCAACAAGCCACTGATCCAATACGGTGTTGAGGAAGCCCTCGCTGCAGGCCTGACCGAAATTTCCATCG TGACCGGTCGTGGCAAGCGCGCTCTTGAAGACCACTTCGACATCAGCTACGAGCTCGAGCACCAGATCAAGGGTACTGAC AAGGAAAAGTACCTGGTCGGTATTCGCAAGCTGATCGACGAATGCAGCTTCTCGTACACTCGTCAGACTGAAATGAAGGG TCTGGGCCACGCCATCCTCAGCGGTCGCCCGCTGATCGGCAACGAAGCGTTCGCCGTGGTTCTGGCCGATGACCTGTGCG TCAACCCTGAGGGTGATGGCGTGCTGGCGCAGATGGTCAAGCTGCACAAGCATTATGGCTGCTCGATCATCGCCATCCAG GAAGTCGATCCGCAGGAAACCAACAAGTATGGCGTGATCGCTGGCGAAGAGATCAAGCCAGGCCTGTTCCGCGTGACCAA CATGGTTGAAAAGCCGAAGCCTGAAGATGCGCCGTCCAACCTGGCGATCATCGGCCGCTACATCCTGACTCCGGACATCT TCGAGAAAATCGAGCAGACCGAGCCGGGCAAGGGCGGTGAAATTCAGATCACCGACGCCTTGATGAAGCAGGCTGCTGAA GGCAATGTGCTTGCGTACAAGTTCAAGGGTGAGCGTTTCGACTGCGGTGGTGCTGAGGGTTACATTCAGGCTACCAACTT CTGCTTCGAGCACTTCTACAAGACCGGCAAAGCTCATTGA
Upstream 100 bases:
>100_bases CCTCTATCATGGCATCGGACGGCCAAAGGCAGCATTGTAAGGTGACTGCCTCATCATTAGACTGCGCCGTTAACACCAAC AGCCCTTACCAAGGACTTTT
Downstream 100 bases:
>100_bases TACCTGAATGACGATGCTGTGAAAACGCCACCTCCGGGTGGCTTTTTCATTTCTGAATAGCCGCCGTGCGGTTATGCTGT AACTCTGCCCAGGAGATAGC
Product: UTP--glucose-1-phosphate uridylyltransferase and type
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MIKKCLFPAAGYGTRFLPATKAMPKEMLPVVNKPLIQYGVEEALAAGLTEISIVTGRGKRALEDHFDISYELEHQIKGTD KEKYLVGIRKLIDECSFSYTRQTEMKGLGHAILSGRPLIGNEAFAVVLADDLCVNPEGDGVLAQMVKLHKHYGCSIIAIQ EVDPQETNKYGVIAGEEIKPGLFRVTNMVEKPKPEDAPSNLAIIGRYILTPDIFEKIEQTEPGKGGEIQITDALMKQAAE GNVLAYKFKGERFDCGGAEGYIQATNFCFEHFYKTGKAH
Sequences:
>Translated_279_residues MIKKCLFPAAGYGTRFLPATKAMPKEMLPVVNKPLIQYGVEEALAAGLTEISIVTGRGKRALEDHFDISYELEHQIKGTD KEKYLVGIRKLIDECSFSYTRQTEMKGLGHAILSGRPLIGNEAFAVVLADDLCVNPEGDGVLAQMVKLHKHYGCSIIAIQ EVDPQETNKYGVIAGEEIKPGLFRVTNMVEKPKPEDAPSNLAIIGRYILTPDIFEKIEQTEPGKGGEIQITDALMKQAAE GNVLAYKFKGERFDCGGAEGYIQATNFCFEHFYKTGKAH >Mature_279_residues MIKKCLFPAAGYGTRFLPATKAMPKEMLPVVNKPLIQYGVEEALAAGLTEISIVTGRGKRALEDHFDISYELEHQIKGTD KEKYLVGIRKLIDECSFSYTRQTEMKGLGHAILSGRPLIGNEAFAVVLADDLCVNPEGDGVLAQMVKLHKHYGCSIIAIQ EVDPQETNKYGVIAGEEIKPGLFRVTNMVEKPKPEDAPSNLAIIGRYILTPDIFEKIEQTEPGKGGEIQITDALMKQAAE GNVLAYKFKGERFDCGGAEGYIQATNFCFEHFYKTGKAH
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=269, Percent_Identity=27.5092936802974, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI11761619, Length=269, Percent_Identity=27.5092936802974, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1787488, Length=270, Percent_Identity=44.4444444444444, Blast_Score=212, Evalue=2e-56, Organism=Escherichia coli, GI1788355, Length=269, Percent_Identity=39.7769516728625, Blast_Score=189, Evalue=2e-49, Organism=Escherichia coli, GI1790224, Length=274, Percent_Identity=26.6423357664234, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788351, Length=275, Percent_Identity=26.1818181818182, Blast_Score=81, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6320148, Length=274, Percent_Identity=24.8175182481752, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 30758; Mature: 30758
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKCLFPAAGYGTRFLPATKAMPKEMLPVVNKPLIQYGVEEALAAGLTEISIVTGRGKR CCCHHCCCCCCCCCCCCCHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCH ALEDHFDISYELEHQIKGTDKEKYLVGIRKLIDECSFSYTRQTEMKGLGHAILSGRPLIG HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC NEAFAVVLADDLCVNPEGDGVLAQMVKLHKHYGCSIIAIQEVDPQETNKYGVIAGEEIKP CCEEEEEEECCEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCC GLFRVTNMVEKPKPEDAPSNLAIIGRYILTPDIFEKIEQTEPGKGGEIQITDALMKQAAE HHHHHHHHHHCCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHCC GNVLAYKFKGERFDCGGAEGYIQATNFCFEHFYKTGKAH CCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKKCLFPAAGYGTRFLPATKAMPKEMLPVVNKPLIQYGVEEALAAGLTEISIVTGRGKR CCCHHCCCCCCCCCCCCCHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCH ALEDHFDISYELEHQIKGTDKEKYLVGIRKLIDECSFSYTRQTEMKGLGHAILSGRPLIG HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC NEAFAVVLADDLCVNPEGDGVLAQMVKLHKHYGCSIIAIQEVDPQETNKYGVIAGEEIKP CCEEEEEEECCEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCCCC GLFRVTNMVEKPKPEDAPSNLAIIGRYILTPDIFEKIEQTEPGKGGEIQITDALMKQAAE HHHHHHHHHHCCCCCCCCCCEEEEHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHCC GNVLAYKFKGERFDCGGAEGYIQATNFCFEHFYKTGKAH CCEEEEEECCCEECCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA